Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AC005300.1-201ENST00000428401 373 ntBASIC3.46□□□□□ -1.86
TBC1D3FA6NER0 CALM2P2-201ENST00000428512 440 ntBASIC3.46□□□□□ -1.86
TBC1D3FA6NER0 PIGFP3-201ENST00000441918 722 ntBASIC3.46□□□□□ -1.86
TBC1D3FA6NER0 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.46□□□□□ -1.86
TBC1D3FA6NER0 CEACAMP4-201ENST00000457676 421 ntBASIC3.46□□□□□ -1.86
TBC1D3FA6NER0 RNU7-180P-201ENST00000459240 63 ntBASIC3.46□□□□□ -1.86
TBC1D3FA6NER0 RPL21P8-201ENST00000465083 535 ntBASIC3.46□□□□□ -1.86
TBC1D3FA6NER0 KC877373.1-201ENST00000479066 408 ntBASIC3.46□□□□□ -1.86
TBC1D3FA6NER0 AL160314.1-201ENST00000490836 438 ntBASIC3.46□□□□□ -1.86
TBC1D3FA6NER0 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.46□□□□□ -1.86
TBC1D3FA6NER0 MTCO3P9-201ENST00000506989 781 ntBASIC3.46□□□□□ -1.86
TBC1D3FA6NER0 FCF1P8-201ENST00000510322 597 ntBASIC3.46□□□□□ -1.86
TBC1D3FA6NER0 RNU6-358P-201ENST00000516564 75 ntBASIC3.46□□□□□ -1.86
TBC1D3FA6NER0 SNORD60.2-201ENST00000516883 86 ntBASIC3.46□□□□□ -1.86
TBC1D3FA6NER0 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.46□□□□□ -1.86
TBC1D3FA6NER0 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
TBC1D3FA6NER0 TRAV28-201ENST00000557548 323 ntBASIC3.46□□□□□ -1.86
TBC1D3FA6NER0 AC015917.1-201ENST00000579654 510 ntBASIC3.46□□□□□ -1.86
TBC1D3FA6NER0 MIR4424-201ENST00000585257 86 ntBASIC3.46□□□□□ -1.86
TBC1D3FA6NER0 AL160281.1-201ENST00000605307 311 ntBASIC3.46□□□□□ -1.86
TBC1D3FA6NER0 MIR15A-201ENST00000607334 83 ntBASIC3.46□□□□□ -1.86
TBC1D3FA6NER0 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.46□□□□□ -1.86
TBC1D3FA6NER0 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.46□□□□□ -1.86
TBC1D3FA6NER0 MIR3651-201ENST00000630427 90 ntBASIC3.46□□□□□ -1.86
TBC1D3FA6NER0 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.46□□□□□ -1.86
TBC1D3FA6NER0 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
TBC1D3FA6NER0 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
TBC1D3FA6NER0 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 NACAP2-201ENST00000318548 624 ntBASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 RNU6-116P-201ENST00000384042 109 ntBASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 MIR325-201ENST00000385260 98 ntBASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 AC006989.1-201ENST00000427212 131 ntBASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 AC005326.1-201ENST00000429197 123 ntBASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 AC092573.2-201ENST00000434546 243 ntBASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 CALM1P1-201ENST00000442082 433 ntBASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 RN7SL594P-201ENST00000470590 287 ntBASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 AL135752.1-201ENST00000479477 471 ntBASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 AL049830.2-201ENST00000480072 201 ntBASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 RPL30P5-201ENST00000494923 336 ntBASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 AC093663.1-201ENST00000497190 394 ntBASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 RNU6-914P-201ENST00000516749 109 ntBASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 RNU6-1231P-201ENST00000517185 103 ntBASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 RN7SKP57-201ENST00000517248 293 ntBASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 ATP5F1P5-201ENST00000526403 760 ntBASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 MTCO3P24-201ENST00000572729 782 ntBASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 AC010525.2-201ENST00000590920 195 ntBASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 NRBF2P5-201ENST00000603087 788 ntBASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 AC006557.5-201ENST00000603126 811 ntBASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 AC090740.1-201ENST00000623193 2262 ntBASIC3.45□□□□□ -1.86
TBC1D3FA6NER0 ZNF807-201ENST00000328088 1707 ntBASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 HSPA8P4-201ENST00000511877 1920 ntBASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 Y_RNA.88-201ENST00000363029 99 ntBASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 RNA5SP42-201ENST00000364278 115 ntBASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 RNU4-20P-201ENST00000365601 151 ntBASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 FGF7P8-201ENST00000402994 292 ntBASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 AL391417.1-201ENST00000404100 426 ntBASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 AL591034.1-201ENST00000407447 340 ntBASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 RNU4-46P-201ENST00000410818 138 ntBASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 RNU6-193P-201ENST00000410977 107 ntBASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 RNA5SP111-201ENST00000411386 101 ntBASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 AC080125.1-201ENST00000414888 684 ntBASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 MTND4LP11-201ENST00000422184 280 ntBASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 AL160275.3-201ENST00000423876 471 ntBASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 AL592045.1-201ENST00000429867 352 ntBASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 RPL36AP53-201ENST00000432891 316 ntBASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 MTATP6P23-201ENST00000440153 476 ntBASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 SNRPFP3-201ENST00000457792 225 ntBASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 RPL23AP62-201ENST00000463396 453 ntBASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 RPL38P4-201ENST00000502376 214 ntBASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 SUMO2P6-201ENST00000505273 288 ntBASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 RNU4-29P-201ENST00000515943 174 ntBASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.44□□□□□ -1.86
TBC1D3FA6NER0 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms