Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 AC011939.3-201ENST00000613686 466 ntBASIC1.3□□□□□ -2.2
TRAV4A0A0B4J268 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.3□□□□□ -2.2
TRAV4A0A0B4J268 AC079416.3-201ENST00000624479 549 ntBASIC1.3□□□□□ -2.2
TRAV4A0A0B4J268 Z75746.1-201ENST00000440243 2080 ntBASIC1.3□□□□□ -2.2
TRAV4A0A0B4J268 Y_RNA.25-201ENST00000362528 102 ntBASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 Y_RNA.245-201ENST00000364493 95 ntBASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 RNA5SP363-201ENST00000365072 115 ntBASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 RNU6-997P-201ENST00000384725 107 ntBASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 TXNP7-201ENST00000406296 293 ntBASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 AL449283.1-202ENST00000418249 604 ntBASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 AC097463.2-201ENST00000421074 142 ntBASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 AL139421.1-201ENST00000423010 169 ntBASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 PTGES3P4-201ENST00000426243 356 ntBASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 RSU1P2-202ENST00000437884 485 ntBASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 MTCO1P53-201ENST00000441633 699 ntBASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 AC244505.3-201ENST00000454598 187 ntBASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 AL441985.1-201ENST00000457727 251 ntBASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 snoU13.8-201ENST00000458890 104 ntBASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 AC117503.1-201ENST00000472241 394 ntBASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 RPL7P18-201ENST00000478965 734 ntBASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 AC104685.1-201ENST00000502445 371 ntBASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 TMEM251P1-201ENST00000503717 318 ntBASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 AC008834.1-201ENST00000511612 175 ntBASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 RANP3-201ENST00000530970 276 ntBASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 AC006518.2-201ENST00000542513 940 ntBASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 ROCK1P1-201ENST00000573767 549 ntBASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 MIR4419B-201ENST00000577260 68 ntBASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 AC026271.5-201ENST00000577873 130 ntBASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 BNIP3P23-201ENST00000599655 511 ntBASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 AL390208.1-201ENST00000605885 644 ntBASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 MIR1322-201ENST00000638013 71 ntBASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.29□□□□□ -2.2
TRAV4A0A0B4J268 SNRPEP3-201ENST00000338402 276 ntBASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 SNORA25B-201ENST00000365507 128 ntBASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 MIR583-201ENST00000384846 75 ntBASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 MIR934-201ENST00000401241 83 ntBASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 AL033519.2-201ENST00000403958 392 ntBASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 RNU6-1140P-201ENST00000410517 106 ntBASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 OR9R1P-201ENST00000412200 877 ntBASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 LUZP4P1-201ENST00000415420 344 ntBASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 TRBV12-1-201ENST00000479785 344 ntBASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 RPL21P99-201ENST00000480369 423 ntBASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 AC027575.1-201ENST00000481064 460 ntBASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 AC140059.1-201ENST00000489238 361 ntBASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 AC010468.3-201ENST00000508225 458 ntBASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 AC093752.1-206ENST00000511823 336 ntBASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 MTCO2P15-201ENST00000532655 656 ntBASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 MTCYBP23-201ENST00000558717 1102 ntBASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 AC090079.2-201ENST00000575289 768 ntBASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 MIR4713-201ENST00000582691 75 ntBASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 AF129408.1-201ENST00000608767 431 ntBASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.28□□□□□ -2.2
TRAV4A0A0B4J268 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
TRAV4A0A0B4J268 MIR16-2-201ENST00000362117 81 ntBASIC1.27□□□□□ -2.21
TRAV4A0A0B4J268 MIR126-201ENST00000362291 85 ntBASIC1.27□□□□□ -2.21
TRAV4A0A0B4J268 U8.3-201ENST00000363321 132 ntBASIC1.27□□□□□ -2.21
TRAV4A0A0B4J268 Y_RNA.548-201ENST00000384656 105 ntBASIC1.27□□□□□ -2.21
TRAV4A0A0B4J268 MIR95-201ENST00000385072 81 ntBASIC1.27□□□□□ -2.21
TRAV4A0A0B4J268 AL357078.2-201ENST00000416486 427 ntBASIC1.27□□□□□ -2.21
TRAV4A0A0B4J268 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.27□□□□□ -2.21
TRAV4A0A0B4J268 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
TRAV4A0A0B4J268 MTND1P28-201ENST00000435623 950 ntBASIC1.27□□□□□ -2.21
TRAV4A0A0B4J268 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.27□□□□□ -2.21
TRAV4A0A0B4J268 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.27□□□□□ -2.21
TRAV4A0A0B4J268 CECR9-201ENST00000453421 199 ntBASIC1.27□□□□□ -2.21
TRAV4A0A0B4J268 AC013267.1-201ENST00000458227 267 ntBASIC1.27□□□□□ -2.21
TRAV4A0A0B4J268 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.27□□□□□ -2.21
TRAV4A0A0B4J268 RPL36AP48-201ENST00000485521 314 ntBASIC1.27□□□□□ -2.21
TRAV4A0A0B4J268 AC092902.1-201ENST00000486999 259 ntBASIC1.27□□□□□ -2.21
TRAV4A0A0B4J268 AC018437.1-201ENST00000492214 406 ntBASIC1.27□□□□□ -2.21
TRAV4A0A0B4J268 RPS29P21-201ENST00000496272 170 ntBASIC1.27□□□□□ -2.21
TRAV4A0A0B4J268 AC092436.1-201ENST00000506450 503 ntBASIC1.27□□□□□ -2.21
TRAV4A0A0B4J268 AC008837.1-201ENST00000511513 412 ntBASIC1.27□□□□□ -2.21
TRAV4A0A0B4J268 RNU6-970P-201ENST00000516312 107 ntBASIC1.27□□□□□ -2.21
TRAV4A0A0B4J268 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms