Protein–RNA interactions for Protein: Q9Y5E5

PCDHB4, Protocadherin beta-4, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB4Q9Y5E5 HIGD1AP11-201ENST00000438361 280 ntBASIC4.29□□□□□ -1.72
PCDHB4Q9Y5E5 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHB4Q9Y5E5 AC008264.1-201ENST00000447612 367 ntBASIC4.29□□□□□ -1.72
PCDHB4Q9Y5E5 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHB4Q9Y5E5 RPL31P61-201ENST00000496160 376 ntBASIC4.29□□□□□ -1.72
PCDHB4Q9Y5E5 AC009901.1-201ENST00000506703 541 ntBASIC4.29□□□□□ -1.72
PCDHB4Q9Y5E5 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHB4Q9Y5E5 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHB4Q9Y5E5 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHB4Q9Y5E5 AC025423.5-201ENST00000550230 219 ntBASIC4.29□□□□□ -1.72
PCDHB4Q9Y5E5 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.29□□□□□ -1.72
PCDHB4Q9Y5E5 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHB4Q9Y5E5 AC012119.1-201ENST00000603184 222 ntBASIC4.29□□□□□ -1.72
PCDHB4Q9Y5E5 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHB4Q9Y5E5 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHB4Q9Y5E5 AC099669.2-201ENST00000616549 437 ntBASIC4.29□□□□□ -1.72
PCDHB4Q9Y5E5 AL591424.2-201ENST00000617023 128 ntBASIC4.29□□□□□ -1.72
PCDHB4Q9Y5E5 MIR4727-201ENST00000622232 55 ntBASIC4.29□□□□□ -1.72
PCDHB4Q9Y5E5 AC112484.5-201ENST00000624189 228 ntBASIC4.29□□□□□ -1.72
PCDHB4Q9Y5E5 AL732372.2-225ENST00000642124 456 ntBASIC4.29□□□□□ -1.72
PCDHB4Q9Y5E5 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHB4Q9Y5E5 LINC02471-203ENST00000641941 4752 ntBASIC4.29□□□□□ -1.72
PCDHB4Q9Y5E5 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHB4Q9Y5E5 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHB4Q9Y5E5 RLIMP1-201ENST00000339626 1680 ntBASIC4.29□□□□□ -1.72
PCDHB4Q9Y5E5 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 Y_RNA.252-201ENST00000364556 101 ntBASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 RNU6-1303P-201ENST00000364841 107 ntBASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 SNORD3H-201ENST00000384486 214 ntBASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 MIR548F4-201ENST00000408515 105 ntBASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 RNU6-985P-201ENST00000410182 104 ntBASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 RNU4-6P-201ENST00000410804 122 ntBASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 AC236972.1-201ENST00000433225 199 ntBASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 AL359672.1-201ENST00000442302 409 ntBASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 AC103987.1-201ENST00000473394 348 ntBASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 AC087854.1-201ENST00000519706 414 ntBASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 COX6CP5-201ENST00000527162 228 ntBASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 AC026371.1-201ENST00000551867 419 ntBASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 MIR4503-201ENST00000582187 83 ntBASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 BNIP3P16-201ENST00000589779 534 ntBASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 MIR15A-201ENST00000607334 83 ntBASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 AC005014.2-201ENST00000607795 599 ntBASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 AC087588.2-201ENST00000617667 426 ntBASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 ZNF807-201ENST00000328088 1707 ntBASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 PRO1804-201ENST00000623780 2050 ntBASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PCDHB4Q9Y5E5 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHB4Q9Y5E5 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHB4Q9Y5E5 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHB4Q9Y5E5 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.27□□□□□ -1.73
PCDHB4Q9Y5E5 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
PCDHB4Q9Y5E5 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHB4Q9Y5E5 AL139811.1-201ENST00000424779 2299 ntBASIC4.27□□□□□ -1.73
PCDHB4Q9Y5E5 AC090337.1-201ENST00000579651 2074 ntBASIC4.27□□□□□ -1.73
PCDHB4Q9Y5E5 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHB4Q9Y5E5 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHB4Q9Y5E5 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
PCDHB4Q9Y5E5 RNU6-266P-201ENST00000364225 107 ntBASIC4.27□□□□□ -1.73
PCDHB4Q9Y5E5 RNU6-306P-201ENST00000384617 107 ntBASIC4.27□□□□□ -1.73
PCDHB4Q9Y5E5 RPL21P65-201ENST00000406094 466 ntBASIC4.27□□□□□ -1.73
PCDHB4Q9Y5E5 RNA5SP317-201ENST00000410176 116 ntBASIC4.27□□□□□ -1.73
PCDHB4Q9Y5E5 RNA5SP311-201ENST00000411290 116 ntBASIC4.27□□□□□ -1.73
PCDHB4Q9Y5E5 MTCYBP10-201ENST00000424905 650 ntBASIC4.27□□□□□ -1.73
PCDHB4Q9Y5E5 MTCYBP9-201ENST00000431021 303 ntBASIC4.27□□□□□ -1.73
PCDHB4Q9Y5E5 TBCAP1-201ENST00000436520 327 ntBASIC4.27□□□□□ -1.73
PCDHB4Q9Y5E5 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.27□□□□□ -1.73
PCDHB4Q9Y5E5 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC4.27□□□□□ -1.73
PCDHB4Q9Y5E5 AL359073.1-201ENST00000448036 403 ntBASIC4.27□□□□□ -1.73
PCDHB4Q9Y5E5 RPL12P25-201ENST00000455592 494 ntBASIC4.27□□□□□ -1.73
PCDHB4Q9Y5E5 BTF3P15-201ENST00000455606 336 ntBASIC4.27□□□□□ -1.73
PCDHB4Q9Y5E5 RPL21P41-201ENST00000459863 264 ntBASIC4.27□□□□□ -1.73
PCDHB4Q9Y5E5 AC096745.1-201ENST00000509945 370 ntBASIC4.27□□□□□ -1.73
PCDHB4Q9Y5E5 Y_RNA.661-201ENST00000516003 99 ntBASIC4.27□□□□□ -1.73
PCDHB4Q9Y5E5 RNA5SP315-201ENST00000516340 116 ntBASIC4.27□□□□□ -1.73
PCDHB4Q9Y5E5 RNA5SP312-201ENST00000517068 116 ntBASIC4.27□□□□□ -1.73
PCDHB4Q9Y5E5 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHB4Q9Y5E5 ERHP1-201ENST00000523006 310 ntBASIC4.27□□□□□ -1.73
PCDHB4Q9Y5E5 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHB4Q9Y5E5 AC091516.1-201ENST00000549191 703 ntBASIC4.27□□□□□ -1.73
PCDHB4Q9Y5E5 MIR4644-201ENST00000579929 84 ntBASIC4.27□□□□□ -1.73
PCDHB4Q9Y5E5 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.27□□□□□ -1.73
PCDHB4Q9Y5E5 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms