Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 Y_RNA.67-201ENST00000362870 100 ntBASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 SNORA25.8-201ENST00000364831 128 ntBASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 RNU6-1226P-201ENST00000384317 107 ntBASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 RNU6-748P-201ENST00000384648 107 ntBASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 STAT4-203ENST00000409995 709 ntTSL 5 BASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 PIGPP2-201ENST00000411569 458 ntBASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 AC023141.4-201ENST00000412031 328 ntBASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 RPS12P24-201ENST00000412619 387 ntBASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 RPL37P10-201ENST00000412884 288 ntBASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 AL136133.1-201ENST00000413694 376 ntBASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 AC092634.2-201ENST00000428146 1010 ntBASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 RPS6P15-201ENST00000431996 751 ntBASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 AL691517.1-201ENST00000440833 1235 ntBASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 DYNLT3P2-201ENST00000442517 295 ntBASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 AL022238.1-201ENST00000442557 355 ntBASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 HMGN2P18-201ENST00000450680 270 ntBASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 AC111193.1-201ENST00000504097 155 ntBASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 RPL21P5-201ENST00000554662 472 ntBASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 AC044913.1-201ENST00000557200 430 ntBASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 AC087465.1-201ENST00000560574 245 ntBASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 HSPE1P19-201ENST00000603327 295 ntBASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 AL589994.2-201ENST00000621124 579 ntBASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 Z99571.1-201ENST00000636677 394 ntBASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 MTND5P9-201ENST00000503854 1755 ntBASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.69□□□□□ -2.3
UBE2D4Q9Y2X8 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
UBE2D4Q9Y2X8 RNU4-38P-201ENST00000364472 129 ntBASIC0.68□□□□□ -2.3
UBE2D4Q9Y2X8 RNU4-31P-201ENST00000384211 141 ntBASIC0.68□□□□□ -2.3
UBE2D4Q9Y2X8 MIR518A2-201ENST00000384966 87 ntBASIC0.68□□□□□ -2.3
UBE2D4Q9Y2X8 SNORA40.19-201ENST00000390846 128 ntBASIC0.68□□□□□ -2.3
UBE2D4Q9Y2X8 NPM1P10-201ENST00000398310 865 ntBASIC0.68□□□□□ -2.3
UBE2D4Q9Y2X8 RNU2-68P-201ENST00000410878 191 ntBASIC0.68□□□□□ -2.3
UBE2D4Q9Y2X8 RPL21P90-201ENST00000415692 466 ntBASIC0.68□□□□□ -2.3
UBE2D4Q9Y2X8 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.68□□□□□ -2.3
UBE2D4Q9Y2X8 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC0.68□□□□□ -2.3
UBE2D4Q9Y2X8 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC0.68□□□□□ -2.3
UBE2D4Q9Y2X8 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.68□□□□□ -2.3
UBE2D4Q9Y2X8 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.68□□□□□ -2.3
UBE2D4Q9Y2X8 USP9YP34-201ENST00000453983 808 ntBASIC0.68□□□□□ -2.3
UBE2D4Q9Y2X8 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.68□□□□□ -2.3
UBE2D4Q9Y2X8 PABPC1P3-201ENST00000469174 459 ntBASIC0.68□□□□□ -2.3
UBE2D4Q9Y2X8 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC0.68□□□□□ -2.3
UBE2D4Q9Y2X8 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.68□□□□□ -2.3
UBE2D4Q9Y2X8 CA1-215ENST00000522389 551 ntTSL 3 BASIC0.68□□□□□ -2.3
UBE2D4Q9Y2X8 AP005660.1-201ENST00000522972 293 ntBASIC0.68□□□□□ -2.3
UBE2D4Q9Y2X8 AP003497.1-201ENST00000528472 562 ntBASIC0.68□□□□□ -2.3
UBE2D4Q9Y2X8 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC0.68□□□□□ -2.3
UBE2D4Q9Y2X8 AC012435.1-202ENST00000568772 240 ntBASIC0.68□□□□□ -2.3
UBE2D4Q9Y2X8 AP001269.3-201ENST00000588718 329 ntBASIC0.68□□□□□ -2.3
UBE2D4Q9Y2X8 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.68□□□□□ -2.3
UBE2D4Q9Y2X8 AC008443.7-201ENST00000622195 246 ntBASIC0.68□□□□□ -2.3
UBE2D4Q9Y2X8 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
UBE2D4Q9Y2X8 NDUFS5P1-201ENST00000405668 289 ntBASIC0.67□□□□□ -2.3
UBE2D4Q9Y2X8 RNU6-516P-201ENST00000411381 104 ntBASIC0.67□□□□□ -2.3
UBE2D4Q9Y2X8 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.67□□□□□ -2.3
UBE2D4Q9Y2X8 SNRPEP10-201ENST00000420249 274 ntBASIC0.67□□□□□ -2.3
UBE2D4Q9Y2X8 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC0.67□□□□□ -2.3
UBE2D4Q9Y2X8 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.67□□□□□ -2.3
UBE2D4Q9Y2X8 USP9YP35-201ENST00000435696 412 ntBASIC0.67□□□□□ -2.3
UBE2D4Q9Y2X8 AL590365.1-201ENST00000450788 243 ntBASIC0.67□□□□□ -2.3
UBE2D4Q9Y2X8 AL137159.1-201ENST00000452808 512 ntBASIC0.67□□□□□ -2.3
UBE2D4Q9Y2X8 RPL31P53-201ENST00000457065 348 ntBASIC0.67□□□□□ -2.3
UBE2D4Q9Y2X8 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.67□□□□□ -2.3
UBE2D4Q9Y2X8 AC104164.3-201ENST00000467363 1258 ntBASIC0.67□□□□□ -2.3
UBE2D4Q9Y2X8 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
UBE2D4Q9Y2X8 AC111000.5-201ENST00000506559 1178 ntBASIC0.67□□□□□ -2.3
UBE2D4Q9Y2X8 AL359273.1-201ENST00000510918 627 ntBASIC0.67□□□□□ -2.3
UBE2D4Q9Y2X8 AF131216.2-201ENST00000512316 564 ntBASIC0.67□□□□□ -2.3
UBE2D4Q9Y2X8 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC0.67□□□□□ -2.3
UBE2D4Q9Y2X8 RNU6-1282P-201ENST00000516735 96 ntBASIC0.67□□□□□ -2.3
UBE2D4Q9Y2X8 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.67□□□□□ -2.3
UBE2D4Q9Y2X8 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC0.67□□□□□ -2.3
UBE2D4Q9Y2X8 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.67□□□□□ -2.3
UBE2D4Q9Y2X8 AC233702.2-202ENST00000562547 291 ntBASIC0.67□□□□□ -2.3
UBE2D4Q9Y2X8 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.67□□□□□ -2.3
UBE2D4Q9Y2X8 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC0.67□□□□□ -2.3
UBE2D4Q9Y2X8 AC098848.2-201ENST00000588023 330 ntBASIC0.67□□□□□ -2.3
UBE2D4Q9Y2X8 AC013553.2-201ENST00000604244 589 ntBASIC0.67□□□□□ -2.3
UBE2D4Q9Y2X8 AC008121.3-201ENST00000618726 433 ntBASIC0.67□□□□□ -2.3
UBE2D4Q9Y2X8 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
UBE2D4Q9Y2X8 Y_RNA.164-201ENST00000363709 102 ntBASIC0.66□□□□□ -2.3
UBE2D4Q9Y2X8 EIF4EP2-201ENST00000422816 654 ntBASIC0.66□□□□□ -2.3
UBE2D4Q9Y2X8 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC0.66□□□□□ -2.3
UBE2D4Q9Y2X8 MTND2P29-201ENST00000438595 412 ntBASIC0.66□□□□□ -2.3
UBE2D4Q9Y2X8 DDX3P2-201ENST00000446138 111 ntBASIC0.66□□□□□ -2.3
UBE2D4Q9Y2X8 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.66□□□□□ -2.3
UBE2D4Q9Y2X8 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.66□□□□□ -2.3
UBE2D4Q9Y2X8 RNA5SP57-201ENST00000459463 123 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms