Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AP000705.1-201ENST00000454567 350 ntBASIC0.5□□□□□ -2.33
MACF1Q9UPN3 AL117187.1-201ENST00000555482 181 ntBASIC0.5□□□□□ -2.33
MACF1Q9UPN3 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC0.5□□□□□ -2.33
MACF1Q9UPN3 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.5□□□□□ -2.33
MACF1Q9UPN3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.5□□□□□ -2.33
MACF1Q9UPN3 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC0.5□□□□□ -2.33
MACF1Q9UPN3 AC023043.3-201ENST00000593113 385 ntBASIC0.5□□□□□ -2.33
MACF1Q9UPN3 AC009229.3-201ENST00000608056 282 ntBASIC0.5□□□□□ -2.33
MACF1Q9UPN3 AF129408.1-201ENST00000608767 431 ntBASIC0.5□□□□□ -2.33
MACF1Q9UPN3 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC0.5□□□□□ -2.33
MACF1Q9UPN3 Y_RNA.9-201ENST00000362354 101 ntBASIC0.5□□□□□ -2.33
MACF1Q9UPN3 RNU6-1197P-201ENST00000391183 107 ntBASIC0.5□□□□□ -2.33
MACF1Q9UPN3 AL512661.1-201ENST00000434586 1253 ntBASIC0.5□□□□□ -2.33
MACF1Q9UPN3 HSPE1P9-201ENST00000440046 311 ntBASIC0.5□□□□□ -2.33
MACF1Q9UPN3 AC118469.1-201ENST00000442943 488 ntBASIC0.5□□□□□ -2.33
MACF1Q9UPN3 RAC1P7-201ENST00000445367 377 ntBASIC0.5□□□□□ -2.33
MACF1Q9UPN3 HMGB3P17-201ENST00000504195 649 ntBASIC0.5□□□□□ -2.33
MACF1Q9UPN3 RNU6-311P-201ENST00000516224 102 ntBASIC0.5□□□□□ -2.33
MACF1Q9UPN3 AC069304.3-201ENST00000603938 1084 ntBASIC0.5□□□□□ -2.33
MACF1Q9UPN3 AP003499.2-201ENST00000624100 483 ntBASIC0.5□□□□□ -2.33
MACF1Q9UPN3 RNU6-1283P-201ENST00000365314 105 ntBASIC0.5□□□□□ -2.33
MACF1Q9UPN3 RNU6-10P-201ENST00000384036 107 ntBASIC0.5□□□□□ -2.33
MACF1Q9UPN3 RNU6-15P-201ENST00000384534 107 ntBASIC0.5□□□□□ -2.33
MACF1Q9UPN3 RNA5SP222-201ENST00000411039 105 ntBASIC0.5□□□□□ -2.33
MACF1Q9UPN3 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC0.5□□□□□ -2.33
MACF1Q9UPN3 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC0.5□□□□□ -2.33
MACF1Q9UPN3 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.5□□□□□ -2.33
MACF1Q9UPN3 AC067942.3-201ENST00000512025 362 ntBASIC0.5□□□□□ -2.33
MACF1Q9UPN3 AC025449.1-201ENST00000603896 529 ntBASIC0.5□□□□□ -2.33
MACF1Q9UPN3 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
MACF1Q9UPN3 SNORA51.4-201ENST00000364993 124 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 RNA5SP465-201ENST00000391195 109 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 U3.37-201ENST00000408528 213 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 RNU6ATAC40P-201ENST00000408580 137 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 RNA5SP239-201ENST00000410218 129 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.49□□□□□ -2.33
MACF1Q9UPN3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.49□□□□□ -2.33
MACF1Q9UPN3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.49□□□□□ -2.33
MACF1Q9UPN3 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC0.49□□□□□ -2.33
MACF1Q9UPN3 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC0.49□□□□□ -2.33
MACF1Q9UPN3 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
MACF1Q9UPN3 AC084035.1-201ENST00000634543 607 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 Y_RNA.165-201ENST00000363721 102 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 Y_RNA.284-201ENST00000364806 102 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.49□□□□□ -2.33
MACF1Q9UPN3 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC0.49□□□□□ -2.33
MACF1Q9UPN3 TPTE2P5-203ENST00000458118 728 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 RPS27P29-201ENST00000463110 252 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 VPS26AP1-201ENST00000483197 979 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 AC104435.1-201ENST00000483483 166 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 RNU6-928P-201ENST00000516876 104 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 AC025755.1-201ENST00000521306 278 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 AC007687.1-201ENST00000602704 304 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC0.49□□□□□ -2.33
MACF1Q9UPN3 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.49□□□□□ -2.33
MACF1Q9UPN3 Y_RNA.6-201ENST00000362350 114 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 Y_RNA.533-201ENST00000384596 114 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 HMGN1P8-201ENST00000463578 288 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
MACF1Q9UPN3 AP000654.2-201ENST00000605633 586 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.49□□□□□ -2.33
MACF1Q9UPN3 RNU6-179P-201ENST00000363350 107 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 RNU6-665P-201ENST00000384639 107 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 CYCSP33-201ENST00000414485 327 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.49□□□□□ -2.33
MACF1Q9UPN3 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC0.49□□□□□ -2.33
MACF1Q9UPN3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.49□□□□□ -2.33
MACF1Q9UPN3 AC022432.1-201ENST00000595739 310 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 AC008121.2-201ENST00000614647 523 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 Y_RNA.2-201ENST00000362330 96 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 Y_RNA.13-201ENST00000362403 112 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 RNU6-190P-201ENST00000384154 102 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 Y_RNA.498-201ENST00000384460 102 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 AC087343.1-201ENST00000477341 475 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 AC069528.1-202ENST00000482888 637 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 AC010468.3-201ENST00000508225 458 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 EIF4A1P12-201ENST00000551910 141 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.49□□□□□ -2.33
MACF1Q9UPN3 AC009712.1-201ENST00000564938 316 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 MIR3139-201ENST00000579145 76 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 MIR4324-201ENST00000584846 72 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 AL132822.1-201ENST00000617063 513 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 MIRLET7A3-201ENST00000362116 74 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 RNU6-650P-201ENST00000365658 111 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC0.49□□□□□ -2.33
MACF1Q9UPN3 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC0.49□□□□□ -2.33
MACF1Q9UPN3 AC113155.1-201ENST00000511141 769 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC0.49□□□□□ -2.33
MACF1Q9UPN3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.49□□□□□ -2.33
MACF1Q9UPN3 AC008676.3-201ENST00000521237 435 ntBASIC0.49□□□□□ -2.33
MACF1Q9UPN3 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.49□□□□□ -2.33
MACF1Q9UPN3 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC0.49□□□□□ -2.33
MACF1Q9UPN3 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC0.49□□□□□ -2.33
MACF1Q9UPN3 MTCO1P18-201ENST00000455518 1419 ntBASIC0.48□□□□□ -2.33
MACF1Q9UPN3 RNU4-44P-201ENST00000363050 141 ntBASIC0.48□□□□□ -2.33
MACF1Q9UPN3 RNY1P11-201ENST00000363759 113 ntBASIC0.48□□□□□ -2.33
MACF1Q9UPN3 AF274854.1-201ENST00000413236 615 ntBASIC0.48□□□□□ -2.33
MACF1Q9UPN3 ARL2BPP3-201ENST00000421226 480 ntBASIC0.48□□□□□ -2.33
MACF1Q9UPN3 AL365496.1-201ENST00000426885 215 ntBASIC0.48□□□□□ -2.33
MACF1Q9UPN3 RGS5-217ENST00000451759 835 ntTSL 3 BASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms