Protein–RNA interactions for Protein: Q9UJJ7

RPUSD1, RNA pseudouridylate synthase domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1Q9UJJ7 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
RPUSD1Q9UJJ7 AL359212.1-201ENST00000556608 614 ntBASIC1.72□□□□□ -2.13
RPUSD1Q9UJJ7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.72□□□□□ -2.13
RPUSD1Q9UJJ7 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.72□□□□□ -2.13
RPUSD1Q9UJJ7 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.72□□□□□ -2.13
RPUSD1Q9UJJ7 OR4K7P-201ENST00000580232 945 ntBASIC1.72□□□□□ -2.13
RPUSD1Q9UJJ7 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
RPUSD1Q9UJJ7 TUG1_2.1-201ENST00000614234 87 ntBASIC1.72□□□□□ -2.13
RPUSD1Q9UJJ7 SDR42E1P2-201ENST00000614861 481 ntBASIC1.72□□□□□ -2.13
RPUSD1Q9UJJ7 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.72□□□□□ -2.13
RPUSD1Q9UJJ7 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.72□□□□□ -2.13
RPUSD1Q9UJJ7 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.13
RPUSD1Q9UJJ7 AC092881.1-201ENST00000638218 2733 ntBASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 ADAM3A-203ENST00000461344 2157 ntBASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 AC010329.5-201ENST00000623497 2174 ntBASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 AL390862.1-201ENST00000635467 1469 ntBASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 Y_RNA.140-201ENST00000363474 103 ntBASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 AL590084.2-201ENST00000401481 382 ntBASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 U3.40-201ENST00000408706 208 ntBASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 MTND1P21-201ENST00000412991 285 ntBASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 MTCO2P25-201ENST00000447065 681 ntBASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 AC025033.1-201ENST00000463883 194 ntBASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 AC104563.1-201ENST00000476147 376 ntBASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 AC090255.1-201ENST00000495779 349 ntBASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 AC135628.1-201ENST00000568867 534 ntBASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 BNIP3P8-201ENST00000597863 560 ntBASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 AC004987.4-201ENST00000603383 338 ntBASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 AL357094.1-201ENST00000603845 844 ntBASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 AC104763.3-201ENST00000613765 618 ntBASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 AL356266.1-201ENST00000623311 483 ntBASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 MTND4P27-201ENST00000450813 1354 ntBASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
RPUSD1Q9UJJ7 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 RNU6-744P-201ENST00000365557 107 ntBASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 RNU6-1316P-201ENST00000384242 108 ntBASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 RNU6-220P-201ENST00000390919 107 ntBASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 AL356379.1-201ENST00000414105 126 ntBASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 BPY2DP-201ENST00000422208 265 ntBASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 AL031659.1-201ENST00000447075 539 ntBASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 AL021397.1-201ENST00000451806 248 ntBASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 AL160314.1-201ENST00000490836 438 ntBASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 AC117522.2-201ENST00000510049 657 ntBASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 AC022447.1-201ENST00000515358 464 ntBASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 RNU1-40P-201ENST00000516816 164 ntBASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 RNU1-97P-201ENST00000516872 164 ntBASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 AC021451.1-201ENST00000523498 1129 ntBASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 AP000403.1-201ENST00000603349 851 ntBASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 AC107214.2-201ENST00000608204 634 ntBASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 AC103710.1-201ENST00000610003 901 ntBASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 MIR7111-201ENST00000619751 72 ntBASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 AC092447.10-201ENST00000620607 1652 ntBASIC1.7□□□□□ -2.14
RPUSD1Q9UJJ7 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.69□□□□□ -2.14
RPUSD1Q9UJJ7 AC004520.1-201ENST00000608362 1413 ntBASIC1.69□□□□□ -2.14
RPUSD1Q9UJJ7 AL356292.1-201ENST00000283110 373 ntBASIC1.69□□□□□ -2.14
RPUSD1Q9UJJ7 RNU6-432P-201ENST00000384196 109 ntBASIC1.69□□□□□ -2.14
RPUSD1Q9UJJ7 SNORA51.11-201ENST00000384442 131 ntBASIC1.69□□□□□ -2.14
RPUSD1Q9UJJ7 RNU6-1257P-201ENST00000384625 110 ntBASIC1.69□□□□□ -2.14
RPUSD1Q9UJJ7 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.69□□□□□ -2.14
RPUSD1Q9UJJ7 CCNG1P1-201ENST00000406783 885 ntBASIC1.69□□□□□ -2.14
RPUSD1Q9UJJ7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms