Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.58□□□□□ -2.16
VPS29Q9UBQ0 NACAP3-201ENST00000552100 481 ntBASIC1.58□□□□□ -2.16
VPS29Q9UBQ0 AC012435.1-202ENST00000568772 240 ntBASIC1.58□□□□□ -2.16
VPS29Q9UBQ0 MIR4637-201ENST00000582405 84 ntBASIC1.58□□□□□ -2.16
VPS29Q9UBQ0 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.58□□□□□ -2.16
VPS29Q9UBQ0 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.58□□□□□ -2.16
VPS29Q9UBQ0 uc_338.14-201ENST00000613162 166 ntBASIC1.58□□□□□ -2.16
VPS29Q9UBQ0 MIR6845-201ENST00000613182 61 ntBASIC1.58□□□□□ -2.16
VPS29Q9UBQ0 HPVC1-201ENST00000629899 1198 ntBASIC1.58□□□□□ -2.16
VPS29Q9UBQ0 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.58□□□□□ -2.16
VPS29Q9UBQ0 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 AP006437.1-201ENST00000641440 3685 ntBASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 AL356292.1-201ENST00000283110 373 ntBASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 MIR16-2-201ENST00000362117 81 ntBASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 RNU6-792P-201ENST00000363490 107 ntBASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 RNU6-650P-201ENST00000365658 111 ntBASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 AL356432.1-201ENST00000405809 419 ntBASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 RPS24P7-201ENST00000416921 246 ntBASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 MTCYBP38-201ENST00000417160 1123 ntBASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 AL451054.2-201ENST00000420896 202 ntBASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 ZFAND6P1-201ENST00000434138 605 ntBASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 SNRPEP9-201ENST00000436794 238 ntBASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 AC009238.1-201ENST00000442165 424 ntBASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 AC009237.6-201ENST00000446969 424 ntBASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 TMEM251P1-201ENST00000503717 318 ntBASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 AC020699.1-201ENST00000505161 445 ntBASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 RNA5SP137-201ENST00000516833 135 ntBASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 AC022861.1-201ENST00000522981 663 ntBASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 ZNF971P-201ENST00000562068 1249 ntBASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 MIR4789-201ENST00000577469 82 ntBASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 MIR4255-201ENST00000579351 72 ntBASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 AC005261.5-201ENST00000596280 355 ntBASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 ZNF92P2-201ENST00000600543 1059 ntBASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 MIR502-201ENST00000606349 86 ntBASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 AC239868.4-201ENST00000608318 671 ntBASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 MIR8081-201ENST00000611533 95 ntBASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 AC009233.1-201ENST00000616477 371 ntBASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
VPS29Q9UBQ0 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
VPS29Q9UBQ0 U3.13-201ENST00000364804 214 ntBASIC1.56□□□□□ -2.16
VPS29Q9UBQ0 SNORA23-201ENST00000365128 182 ntBASIC1.56□□□□□ -2.16
VPS29Q9UBQ0 Y_RNA.548-201ENST00000384656 105 ntBASIC1.56□□□□□ -2.16
VPS29Q9UBQ0 RNU6-1300P-201ENST00000391046 108 ntBASIC1.56□□□□□ -2.16
VPS29Q9UBQ0 RNA5SP450-201ENST00000411206 102 ntBASIC1.56□□□□□ -2.16
VPS29Q9UBQ0 LUZP4P1-201ENST00000415420 344 ntBASIC1.56□□□□□ -2.16
VPS29Q9UBQ0 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.56□□□□□ -2.16
VPS29Q9UBQ0 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.56□□□□□ -2.16
VPS29Q9UBQ0 HMGB3P12-201ENST00000438745 556 ntBASIC1.56□□□□□ -2.16
VPS29Q9UBQ0 AC092427.1-201ENST00000439177 601 ntBASIC1.56□□□□□ -2.16
VPS29Q9UBQ0 RPL23AP6-201ENST00000446637 472 ntBASIC1.56□□□□□ -2.16
VPS29Q9UBQ0 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.56□□□□□ -2.16
VPS29Q9UBQ0 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.56□□□□□ -2.16
VPS29Q9UBQ0 AL160314.1-201ENST00000490836 438 ntBASIC1.56□□□□□ -2.16
VPS29Q9UBQ0 AC091965.2-201ENST00000512324 613 ntBASIC1.56□□□□□ -2.16
VPS29Q9UBQ0 RNU6-295P-201ENST00000516901 104 ntBASIC1.56□□□□□ -2.16
VPS29Q9UBQ0 AC107953.1-201ENST00000522216 297 ntBASIC1.56□□□□□ -2.16
VPS29Q9UBQ0 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.56□□□□□ -2.16
VPS29Q9UBQ0 LINC00933-203ENST00000559812 219 ntBASIC1.56□□□□□ -2.16
VPS29Q9UBQ0 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.56□□□□□ -2.16
VPS29Q9UBQ0 AP001542.2-201ENST00000593141 364 ntBASIC1.56□□□□□ -2.16
VPS29Q9UBQ0 OR4H6P-202ENST00000603819 340 ntBASIC1.56□□□□□ -2.16
VPS29Q9UBQ0 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
VPS29Q9UBQ0 ZNF876P-202ENST00000398732 1485 ntBASIC1.56□□□□□ -2.16
VPS29Q9UBQ0 AL138713.1-201ENST00000624026 2130 ntBASIC1.55□□□□□ -2.16
VPS29Q9UBQ0 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
VPS29Q9UBQ0 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
VPS29Q9UBQ0 RNU6-778P-201ENST00000363269 103 ntBASIC1.55□□□□□ -2.16
VPS29Q9UBQ0 RNU6-748P-201ENST00000384648 107 ntBASIC1.55□□□□□ -2.16
VPS29Q9UBQ0 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
VPS29Q9UBQ0 CCNG1P1-201ENST00000406783 885 ntBASIC1.55□□□□□ -2.16
VPS29Q9UBQ0 RN7SKP101-201ENST00000411376 320 ntBASIC1.55□□□□□ -2.16
VPS29Q9UBQ0 TPMTP3-201ENST00000411928 735 ntBASIC1.55□□□□□ -2.16
VPS29Q9UBQ0 AL139421.1-201ENST00000423010 169 ntBASIC1.55□□□□□ -2.16
VPS29Q9UBQ0 AL353729.1-201ENST00000425044 720 ntBASIC1.55□□□□□ -2.16
VPS29Q9UBQ0 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.55□□□□□ -2.16
VPS29Q9UBQ0 AC244505.3-201ENST00000454598 187 ntBASIC1.55□□□□□ -2.16
VPS29Q9UBQ0 AC069528.1-202ENST00000482888 637 ntBASIC1.55□□□□□ -2.16
VPS29Q9UBQ0 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.55□□□□□ -2.16
VPS29Q9UBQ0 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.55□□□□□ -2.16
VPS29Q9UBQ0 snoZ278.1-201ENST00000517059 112 ntBASIC1.55□□□□□ -2.16
VPS29Q9UBQ0 RNA5SP290-201ENST00000517133 127 ntBASIC1.55□□□□□ -2.16
VPS29Q9UBQ0 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.55□□□□□ -2.16
VPS29Q9UBQ0 AP001189.2-201ENST00000527320 189 ntBASIC1.55□□□□□ -2.16
VPS29Q9UBQ0 AP005435.4-201ENST00000529514 284 ntBASIC1.55□□□□□ -2.16
VPS29Q9UBQ0 AC006518.2-201ENST00000542513 940 ntBASIC1.55□□□□□ -2.16
VPS29Q9UBQ0 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.55□□□□□ -2.16
VPS29Q9UBQ0 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.55□□□□□ -2.16
VPS29Q9UBQ0 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.55□□□□□ -2.16
VPS29Q9UBQ0 AL031274.2-201ENST00000599419 203 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms