Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 FAM60DP-201ENST00000524174 632 ntBASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 AC026333.2-201ENST00000542164 106 ntBASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 AC011602.1-201ENST00000546484 331 ntBASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 AC093012.1-202ENST00000549403 582 ntBASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 ARL2BPP2-201ENST00000550907 489 ntBASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 HIF1AP1-201ENST00000553642 175 ntBASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 UBE2V2P2-201ENST00000587677 504 ntBASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 AC024614.3-201ENST00000637860 256 ntBASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 AF127577.6-201ENST00000623352 2191 ntBASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 OR4G2P-202ENST00000641004 1759 ntBASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 AC007823.1-201ENST00000569932 1566 ntBASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 MTND4P23-201ENST00000447723 1363 ntBASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 AL021368.2-201ENST00000606125 5352 ntBASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 U3.11-201ENST00000364476 212 ntBASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 MIR514A1-201ENST00000385133 98 ntBASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 MT-TD-201ENST00000387419 68 ntBASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 RNU6-1009P-201ENST00000390996 107 ntBASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 RN7SKP111-201ENST00000410349 271 ntBASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 RNU2-36P-201ENST00000410361 191 ntBASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 RNU6-1068P-201ENST00000410958 103 ntBASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 OR9R1P-201ENST00000412200 877 ntBASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 ZNF90P2-204ENST00000419323 1075 ntBASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 YPEL5P1-201ENST00000419731 367 ntBASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 HMGB3P12-201ENST00000438745 556 ntBASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 AMD1P1-201ENST00000457220 922 ntBASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 RPL23AP62-201ENST00000463396 453 ntBASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 RPL31P60-201ENST00000478450 367 ntBASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 AC091951.2-201ENST00000500762 203 ntBASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 RNU6-875P-201ENST00000516488 106 ntBASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 ZNF192P1-203ENST00000565888 810 ntBASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 HMGB1P6-201ENST00000569046 646 ntBASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 AC005951.2-201ENST00000576282 495 ntBASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 AL117336.2-201ENST00000602435 335 ntBASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 NRBF2P5-201ENST00000603087 788 ntBASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 AC087045.1-201ENST00000605856 382 ntBASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 AC024940.5-201ENST00000622889 474 ntBASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 AC099654.10-201ENST00000640395 161 ntBASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 AL079305.1-201ENST00000623159 3008 ntBASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 MFSD8-233ENST00000641482 4860 ntBASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
NCKIPSDQ9NZQ3 AF117829.1-206ENST00000621883 3802 ntBASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 CKAP2P1-201ENST00000555477 2049 ntBASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 Y_RNA.160-201ENST00000363677 92 ntBASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 RNU6-1011P-201ENST00000384668 107 ntBASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 MIR558-201ENST00000384920 94 ntBASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 MIR493-201ENST00000385254 89 ntBASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 RPL21P111-201ENST00000418453 477 ntBASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 SNRPEP10-201ENST00000420249 274 ntBASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 AL356867.1-201ENST00000429623 299 ntBASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 RPS20P5-201ENST00000434808 360 ntBASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 BNIP3P2-201ENST00000441221 577 ntBASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 CALM1P1-201ENST00000442082 433 ntBASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 AC079781.2-201ENST00000446424 169 ntBASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 AC016696.1-201ENST00000446949 318 ntBASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 AC010401.1-201ENST00000463867 348 ntBASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 RPL39P36-201ENST00000490784 156 ntBASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 AC018710.1-201ENST00000506509 158 ntBASIC3.48□□□□□ -1.85
NCKIPSDQ9NZQ3 RNU1-61P-201ENST00000516107 151 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms