Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.91□□□□□ -1.78
MKS1Q9NXB0 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.91□□□□□ -1.78
MKS1Q9NXB0 TRAV37-201ENST00000553906 342 ntBASIC3.91□□□□□ -1.78
MKS1Q9NXB0 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.91□□□□□ -1.78
MKS1Q9NXB0 LRRC37A5P-203ENST00000580181 585 ntBASIC3.91□□□□□ -1.78
MKS1Q9NXB0 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.91□□□□□ -1.78
MKS1Q9NXB0 MIR4715-201ENST00000584117 79 ntBASIC3.91□□□□□ -1.78
MKS1Q9NXB0 AC005498.1-201ENST00000592125 465 ntBASIC3.91□□□□□ -1.78
MKS1Q9NXB0 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.91□□□□□ -1.78
MKS1Q9NXB0 uc_338.5-201ENST00000611839 155 ntBASIC3.91□□□□□ -1.78
MKS1Q9NXB0 AL031601.2-202ENST00000622650 282 ntBASIC3.91□□□□□ -1.78
MKS1Q9NXB0 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.91□□□□□ -1.78
MKS1Q9NXB0 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
MKS1Q9NXB0 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
MKS1Q9NXB0 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
MKS1Q9NXB0 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
MKS1Q9NXB0 AL079305.1-201ENST00000623159 3008 ntBASIC3.91□□□□□ -1.78
MKS1Q9NXB0 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.91□□□□□ -1.78
MKS1Q9NXB0 RPS4XP5-202ENST00000449995 1334 ntBASIC3.91□□□□□ -1.78
MKS1Q9NXB0 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.91□□□□□ -1.78
MKS1Q9NXB0 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
MKS1Q9NXB0 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.9□□□□□ -1.78
MKS1Q9NXB0 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
MKS1Q9NXB0 RNU6-797P-201ENST00000363101 109 ntBASIC3.9□□□□□ -1.79
MKS1Q9NXB0 RNA5SP366-201ENST00000365454 123 ntBASIC3.9□□□□□ -1.79
MKS1Q9NXB0 Y_RNA.480-201ENST00000384364 102 ntBASIC3.9□□□□□ -1.79
MKS1Q9NXB0 SNORA1.3-201ENST00000384676 136 ntBASIC3.9□□□□□ -1.79
MKS1Q9NXB0 AL356432.1-201ENST00000405809 419 ntBASIC3.9□□□□□ -1.79
MKS1Q9NXB0 RNU6-607P-201ENST00000411283 108 ntBASIC3.9□□□□□ -1.79
MKS1Q9NXB0 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.9□□□□□ -1.79
MKS1Q9NXB0 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.9□□□□□ -1.79
MKS1Q9NXB0 MTND4LP16-201ENST00000440828 295 ntBASIC3.9□□□□□ -1.79
MKS1Q9NXB0 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.9□□□□□ -1.79
MKS1Q9NXB0 RPL12P25-201ENST00000455592 494 ntBASIC3.9□□□□□ -1.79
MKS1Q9NXB0 AC087884.1-201ENST00000469738 328 ntBASIC3.9□□□□□ -1.79
MKS1Q9NXB0 RN7SL738P-201ENST00000470264 297 ntBASIC3.9□□□□□ -1.79
MKS1Q9NXB0 AC084357.1-201ENST00000473404 255 ntBASIC3.9□□□□□ -1.79
MKS1Q9NXB0 AL132838.2-201ENST00000492041 314 ntBASIC3.9□□□□□ -1.79
MKS1Q9NXB0 HMGB1P30-201ENST00000492455 606 ntBASIC3.9□□□□□ -1.79
MKS1Q9NXB0 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
MKS1Q9NXB0 RNU6-864P-201ENST00000516256 108 ntBASIC3.9□□□□□ -1.79
MKS1Q9NXB0 RN7SKP209-201ENST00000516888 304 ntBASIC3.9□□□□□ -1.79
MKS1Q9NXB0 AC025755.1-201ENST00000521306 278 ntBASIC3.9□□□□□ -1.79
MKS1Q9NXB0 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.9□□□□□ -1.79
MKS1Q9NXB0 CYCSP27-201ENST00000527643 293 ntBASIC3.9□□□□□ -1.79
MKS1Q9NXB0 CYCSP29-201ENST00000533731 318 ntBASIC3.9□□□□□ -1.79
MKS1Q9NXB0 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.9□□□□□ -1.79
MKS1Q9NXB0 AC091516.1-201ENST00000549191 703 ntBASIC3.9□□□□□ -1.79
MKS1Q9NXB0 AC026464.5-201ENST00000562497 722 ntBASIC3.9□□□□□ -1.79
MKS1Q9NXB0 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.9□□□□□ -1.79
MKS1Q9NXB0 AC037471.2-201ENST00000564941 598 ntBASIC3.9□□□□□ -1.79
MKS1Q9NXB0 MIR4474-201ENST00000579189 78 ntBASIC3.9□□□□□ -1.79
MKS1Q9NXB0 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.9□□□□□ -1.79
MKS1Q9NXB0 AL117336.2-201ENST00000602435 335 ntBASIC3.9□□□□□ -1.79
MKS1Q9NXB0 AC007938.3-201ENST00000604965 623 ntBASIC3.9□□□□□ -1.79
MKS1Q9NXB0 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.9□□□□□ -1.79
MKS1Q9NXB0 AL121757.2-201ENST00000611223 313 ntBASIC3.9□□□□□ -1.79
MKS1Q9NXB0 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
MKS1Q9NXB0 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.9□□□□□ -1.79
MKS1Q9NXB0 AC012618.3-205ENST00000637896 1496 ntBASIC3.9□□□□□ -1.79
MKS1Q9NXB0 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.9□□□□□ -1.79
MKS1Q9NXB0 AC110774.1-201ENST00000623567 2018 ntBASIC3.9□□□□□ -1.79
MKS1Q9NXB0 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
MKS1Q9NXB0 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
MKS1Q9NXB0 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
MKS1Q9NXB0 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.89□□□□□ -1.79
MKS1Q9NXB0 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
MKS1Q9NXB0 MIR412-201ENST00000362142 91 ntBASIC3.89□□□□□ -1.79
MKS1Q9NXB0 RNU6-254P-201ENST00000363377 107 ntBASIC3.89□□□□□ -1.79
MKS1Q9NXB0 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
MKS1Q9NXB0 MIR199A2-201ENST00000385289 110 ntBASIC3.89□□□□□ -1.79
MKS1Q9NXB0 SNORA11B-201ENST00000408175 129 ntBASIC3.89□□□□□ -1.79
MKS1Q9NXB0 AC016397.1-201ENST00000412463 242 ntBASIC3.89□□□□□ -1.79
MKS1Q9NXB0 MRPL50P4-201ENST00000446432 475 ntBASIC3.89□□□□□ -1.79
MKS1Q9NXB0 PPP1R2P5-201ENST00000457256 603 ntBASIC3.89□□□□□ -1.79
MKS1Q9NXB0 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.89□□□□□ -1.79
MKS1Q9NXB0 snoU13.1-201ENST00000459157 104 ntBASIC3.89□□□□□ -1.79
MKS1Q9NXB0 AC084198.1-201ENST00000477747 402 ntBASIC3.89□□□□□ -1.79
MKS1Q9NXB0 RPL21P13-201ENST00000488305 481 ntBASIC3.89□□□□□ -1.79
MKS1Q9NXB0 TRBVA-201ENST00000498804 316 ntBASIC3.89□□□□□ -1.79
MKS1Q9NXB0 AC079140.5-201ENST00000507882 310 ntBASIC3.89□□□□□ -1.79
MKS1Q9NXB0 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.89□□□□□ -1.79
MKS1Q9NXB0 RNU6-1069P-201ENST00000516612 133 ntBASIC3.89□□□□□ -1.79
MKS1Q9NXB0 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.89□□□□□ -1.79
MKS1Q9NXB0 YPEL5P3-201ENST00000547227 352 ntBASIC3.89□□□□□ -1.79
MKS1Q9NXB0 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.89□□□□□ -1.79
MKS1Q9NXB0 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.89□□□□□ -1.79
MKS1Q9NXB0 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.89□□□□□ -1.79
MKS1Q9NXB0 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.89□□□□□ -1.79
MKS1Q9NXB0 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.89□□□□□ -1.79
MKS1Q9NXB0 AMZ2P1-203ENST00000565833 850 ntBASIC3.89□□□□□ -1.79
MKS1Q9NXB0 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3.89□□□□□ -1.79
MKS1Q9NXB0 AL022345.1-201ENST00000607292 135 ntBASIC3.89□□□□□ -1.79
MKS1Q9NXB0 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.89□□□□□ -1.79
MKS1Q9NXB0 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
MKS1Q9NXB0 FAM35BP-202ENST00000497389 3337 ntBASIC3.89□□□□□ -1.79
MKS1Q9NXB0 AC007256.1-201ENST00000392253 2765 ntBASIC3.89□□□□□ -1.79
MKS1Q9NXB0 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
MKS1Q9NXB0 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
MKS1Q9NXB0 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 208.3 ms