Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.53□□□□□ -2
HPF1Q9NWY4 AC104454.1-201ENST00000421341 1401 ntBASIC2.53□□□□□ -2
HPF1Q9NWY4 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HPF1Q9NWY4 RNU6-748P-201ENST00000384648 107 ntBASIC2.53□□□□□ -2
HPF1Q9NWY4 MIR9-1-201ENST00000385198 89 ntBASIC2.53□□□□□ -2
HPF1Q9NWY4 MIR1302-8-201ENST00000408342 128 ntBASIC2.53□□□□□ -2
HPF1Q9NWY4 RNA5SP21-201ENST00000410917 96 ntBASIC2.53□□□□□ -2
HPF1Q9NWY4 AF274854.1-201ENST00000413236 615 ntBASIC2.53□□□□□ -2
HPF1Q9NWY4 HMGB1P11-201ENST00000413899 637 ntBASIC2.53□□□□□ -2
HPF1Q9NWY4 AL451074.5-201ENST00000415894 435 ntBASIC2.53□□□□□ -2
HPF1Q9NWY4 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.53□□□□□ -2
HPF1Q9NWY4 AL354692.1-201ENST00000423044 315 ntBASIC2.53□□□□□ -2
HPF1Q9NWY4 AC019097.1-201ENST00000424783 735 ntBASIC2.53□□□□□ -2
HPF1Q9NWY4 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.53□□□□□ -2
HPF1Q9NWY4 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.53□□□□□ -2
HPF1Q9NWY4 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.53□□□□□ -2
HPF1Q9NWY4 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.53□□□□□ -2
HPF1Q9NWY4 UBE2FP3-201ENST00000436366 524 ntBASIC2.53□□□□□ -2
HPF1Q9NWY4 UBE2D3P1-201ENST00000436669 444 ntBASIC2.53□□□□□ -2
HPF1Q9NWY4 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.53□□□□□ -2
HPF1Q9NWY4 MTND4P25-201ENST00000441039 533 ntBASIC2.53□□□□□ -2
HPF1Q9NWY4 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.53□□□□□ -2
HPF1Q9NWY4 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.53□□□□□ -2
HPF1Q9NWY4 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.53□□□□□ -2
HPF1Q9NWY4 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.53□□□□□ -2
HPF1Q9NWY4 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.53□□□□□ -2
HPF1Q9NWY4 SNORD109B-201ENST00000458961 67 ntBASIC2.53□□□□□ -2
HPF1Q9NWY4 SNORD109A-201ENST00000459128 67 ntBASIC2.53□□□□□ -2
HPF1Q9NWY4 UBE2V1P12-201ENST00000503954 474 ntBASIC2.53□□□□□ -2
HPF1Q9NWY4 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.53□□□□□ -2
HPF1Q9NWY4 RNA5SP82-201ENST00000516707 92 ntBASIC2.53□□□□□ -2
HPF1Q9NWY4 RNU6-1183P-201ENST00000517054 60 ntBASIC2.53□□□□□ -2
HPF1Q9NWY4 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.53□□□□□ -2
HPF1Q9NWY4 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.53□□□□□ -2
HPF1Q9NWY4 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.53□□□□□ -2
HPF1Q9NWY4 AC079600.2-201ENST00000550076 130 ntBASIC2.53□□□□□ -2
HPF1Q9NWY4 RPS3AP4-201ENST00000555161 764 ntBASIC2.53□□□□□ -2
HPF1Q9NWY4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.53□□□□□ -2
HPF1Q9NWY4 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.53□□□□□ -2
HPF1Q9NWY4 NRBF2P1-201ENST00000587407 859 ntBASIC2.53□□□□□ -2
HPF1Q9NWY4 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.53□□□□□ -2
HPF1Q9NWY4 AL356575.1-201ENST00000603008 283 ntBASIC2.53□□□□□ -2
HPF1Q9NWY4 AC006023.1-201ENST00000603944 259 ntBASIC2.53□□□□□ -2
HPF1Q9NWY4 AL355472.4-201ENST00000610233 626 ntBASIC2.53□□□□□ -2
HPF1Q9NWY4 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.53□□□□□ -2
HPF1Q9NWY4 AC013470.4-201ENST00000619978 986 ntBASIC2.53□□□□□ -2
HPF1Q9NWY4 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.53□□□□□ -2
HPF1Q9NWY4 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.53□□□□□ -2
HPF1Q9NWY4 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
HPF1Q9NWY4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
HPF1Q9NWY4 RNU6-859P-201ENST00000362728 107 ntBASIC2.52□□□□□ -2.01
HPF1Q9NWY4 RNY4P24-201ENST00000362735 96 ntBASIC2.52□□□□□ -2.01
HPF1Q9NWY4 Y_RNA.500-201ENST00000384466 111 ntBASIC2.52□□□□□ -2.01
HPF1Q9NWY4 ELOCP17-201ENST00000414751 326 ntBASIC2.52□□□□□ -2.01
HPF1Q9NWY4 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.52□□□□□ -2.01
HPF1Q9NWY4 AL592045.1-201ENST00000429867 352 ntBASIC2.52□□□□□ -2.01
HPF1Q9NWY4 TIMM9P1-201ENST00000436122 256 ntBASIC2.52□□□□□ -2.01
HPF1Q9NWY4 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.52□□□□□ -2.01
HPF1Q9NWY4 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.52□□□□□ -2.01
HPF1Q9NWY4 AC124916.1-201ENST00000444020 547 ntBASIC2.52□□□□□ -2.01
HPF1Q9NWY4 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.52□□□□□ -2.01
HPF1Q9NWY4 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.52□□□□□ -2.01
HPF1Q9NWY4 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.52□□□□□ -2.01
HPF1Q9NWY4 RNU6-953P-201ENST00000459154 107 ntBASIC2.52□□□□□ -2.01
HPF1Q9NWY4 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.52□□□□□ -2.01
HPF1Q9NWY4 RN7SL297P-201ENST00000483161 293 ntBASIC2.52□□□□□ -2.01
HPF1Q9NWY4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.52□□□□□ -2.01
HPF1Q9NWY4 TBCAP3-201ENST00000512475 312 ntBASIC2.52□□□□□ -2.01
HPF1Q9NWY4 RNU6-581P-201ENST00000516214 105 ntBASIC2.52□□□□□ -2.01
HPF1Q9NWY4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.52□□□□□ -2.01
HPF1Q9NWY4 HMGB1P41-201ENST00000520234 440 ntBASIC2.52□□□□□ -2.01
HPF1Q9NWY4 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.52□□□□□ -2.01
HPF1Q9NWY4 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.52□□□□□ -2.01
HPF1Q9NWY4 MIR4782-201ENST00000577987 79 ntBASIC2.52□□□□□ -2.01
HPF1Q9NWY4 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.52□□□□□ -2.01
HPF1Q9NWY4 BNIP3P9-201ENST00000603714 553 ntBASIC2.52□□□□□ -2.01
HPF1Q9NWY4 AL670379.6-201ENST00000603753 252 ntBASIC2.52□□□□□ -2.01
HPF1Q9NWY4 AL670379.11-201ENST00000604059 253 ntBASIC2.52□□□□□ -2.01
HPF1Q9NWY4 AC008162.1-201ENST00000604718 254 ntBASIC2.52□□□□□ -2.01
HPF1Q9NWY4 AL670379.1-201ENST00000604752 252 ntBASIC2.52□□□□□ -2.01
HPF1Q9NWY4 AL670379.5-201ENST00000605253 252 ntBASIC2.52□□□□□ -2.01
HPF1Q9NWY4 AL670379.12-201ENST00000605291 253 ntBASIC2.52□□□□□ -2.01
HPF1Q9NWY4 AL670379.8-201ENST00000605353 252 ntBASIC2.52□□□□□ -2.01
HPF1Q9NWY4 AL670379.7-201ENST00000605823 252 ntBASIC2.52□□□□□ -2.01
HPF1Q9NWY4 MIR6895-201ENST00000613497 78 ntBASIC2.52□□□□□ -2.01
HPF1Q9NWY4 AL355493.4-201ENST00000618530 292 ntBASIC2.52□□□□□ -2.01
HPF1Q9NWY4 AL109620.1-201ENST00000618738 1197 ntBASIC2.52□□□□□ -2.01
HPF1Q9NWY4 AC012640.5-201ENST00000623897 319 ntBASIC2.52□□□□□ -2.01
HPF1Q9NWY4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.52□□□□□ -2.01
HPF1Q9NWY4 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
HPF1Q9NWY4 AL355596.1-201ENST00000565399 3996 ntBASIC2.51□□□□□ -2.01
HPF1Q9NWY4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
HPF1Q9NWY4 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HPF1Q9NWY4 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
HPF1Q9NWY4 ZNF29P-201ENST00000225587 168 ntBASIC2.51□□□□□ -2.01
HPF1Q9NWY4 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
HPF1Q9NWY4 RNU6-931P-201ENST00000363850 107 ntBASIC2.51□□□□□ -2.01
HPF1Q9NWY4 SNORA25.6-201ENST00000364121 118 ntBASIC2.51□□□□□ -2.01
HPF1Q9NWY4 RNU1-112P-201ENST00000364401 164 ntBASIC2.51□□□□□ -2.01
HPF1Q9NWY4 MIR196B-201ENST00000384852 84 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms