Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 AC104806.1-201ENST00000508720 308 ntBASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 AC105417.1-201ENST00000514691 285 ntBASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 RN7SKP18-201ENST00000516005 275 ntBASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 SNORA64.4-201ENST00000516632 81 ntBASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 RNA5SP165-201ENST00000517142 115 ntBASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 IGKV2-26-201ENST00000518305 343 ntBASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 AC104383.1-201ENST00000530297 370 ntBASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 AL512310.1-201ENST00000548639 172 ntBASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 HMGB1P33-201ENST00000563485 527 ntBASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 AC004805.2-201ENST00000605382 482 ntBASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 AC073308.1-201ENST00000623696 305 ntBASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 AL512643.1-201ENST00000635735 524 ntBASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 AC068137.3-201ENST00000639191 341 ntBASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 AC073869.6-201ENST00000640656 341 ntBASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 AL161912.2-201ENST00000565707 3007 ntBASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SLC6A13Q9NSD5 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.15□□□□□ -1.9
SLC6A13Q9NSD5 AC027514.1-201ENST00000588561 1603 ntBASIC3.15□□□□□ -1.9
SLC6A13Q9NSD5 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SLC6A13Q9NSD5 AC017071.1-201ENST00000564407 2204 ntBASIC3.15□□□□□ -1.9
SLC6A13Q9NSD5 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 MIR301A-201ENST00000385261 86 ntBASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 RNU6-1158P-201ENST00000391167 107 ntBASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 CISD1P1-201ENST00000393907 327 ntBASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 RNA5SP44-201ENST00000410446 133 ntBASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 RNA5SP293-201ENST00000410527 113 ntBASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 RNU2-68P-201ENST00000410878 191 ntBASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 MRPL50P2-201ENST00000416821 482 ntBASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 YME1L1P1-201ENST00000429435 297 ntBASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 RPL36AP53-201ENST00000432891 316 ntBASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 AL596276.1-201ENST00000434465 418 ntBASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 FDX1P2-201ENST00000450769 375 ntBASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 RBMY2UP-201ENST00000453474 324 ntBASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 AC010099.1-201ENST00000455434 375 ntBASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 RPL12P25-201ENST00000455592 494 ntBASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 AL162395.1-201ENST00000457882 422 ntBASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 AC126182.1-201ENST00000478134 357 ntBASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 AC006483.1-201ENST00000487308 313 ntBASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 SUMO2P6-201ENST00000505273 288 ntBASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 RNU1-95P-201ENST00000516357 160 ntBASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 Y_RNA.693-201ENST00000516641 110 ntBASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 RNU1-128P-201ENST00000516704 160 ntBASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 RNU6-1315P-201ENST00000517187 99 ntBASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 RNU6-711P-201ENST00000517255 106 ntBASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 AP003122.3-201ENST00000526316 255 ntBASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 AC084851.1-201ENST00000529105 249 ntBASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 AC005951.1-201ENST00000576706 485 ntBASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 MIR4703-201ENST00000577728 79 ntBASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 MIR3944-201ENST00000581277 108 ntBASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 AC007621.1-201ENST00000604544 437 ntBASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 AL021368.2-201ENST00000606125 5352 ntBASIC3.15□□□□□ -1.91
SLC6A13Q9NSD5 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 RNU6-1287P-201ENST00000362914 107 ntBASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 SNORA73.2-201ENST00000364946 201 ntBASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 SNORA70.4-201ENST00000365509 134 ntBASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 SNORA5A-201ENST00000384111 134 ntBASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 RNU6-1060P-201ENST00000384664 107 ntBASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 MIR888-201ENST00000401186 77 ntBASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 FCF1P9-201ENST00000412546 282 ntBASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 RPS15AP6-201ENST00000420703 385 ntBASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 AC099548.1-201ENST00000421443 426 ntBASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 AL160275.3-201ENST00000423876 471 ntBASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 MTCO3P30-201ENST00000426425 670 ntBASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 AL606489.2-201ENST00000433886 234 ntBASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 RPL23AP22-201ENST00000437556 453 ntBASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 RPL7P54-201ENST00000438336 674 ntBASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 MTND1P18-201ENST00000448191 573 ntBASIC3.14□□□□□ -1.91
SLC6A13Q9NSD5 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms