Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.35
RTN4Q9NQC3 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC6.58□□□□□ -1.36
RTN4Q9NQC3 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RTN4Q9NQC3 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
RTN4Q9NQC3 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RTN4Q9NQC3 RNA5SP77-201ENST00000365394 120 ntBASIC6.58□□□□□ -1.36
RTN4Q9NQC3 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RTN4Q9NQC3 RNU6-318P-201ENST00000384283 103 ntBASIC6.58□□□□□ -1.36
RTN4Q9NQC3 C4BPAP2-201ENST00000428434 478 ntBASIC6.58□□□□□ -1.36
RTN4Q9NQC3 WARS2P1-201ENST00000429678 537 ntBASIC6.58□□□□□ -1.36
RTN4Q9NQC3 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC6.58□□□□□ -1.36
RTN4Q9NQC3 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC6.58□□□□□ -1.36
RTN4Q9NQC3 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
RTN4Q9NQC3 MTND4LP30-201ENST00000454092 297 ntBASIC6.58□□□□□ -1.36
RTN4Q9NQC3 GZMAP1-201ENST00000503054 631 ntBASIC6.58□□□□□ -1.36
RTN4Q9NQC3 AC022404.1-201ENST00000555320 273 ntBASIC6.58□□□□□ -1.36
RTN4Q9NQC3 AC136932.1-201ENST00000574771 208 ntBASIC6.58□□□□□ -1.36
RTN4Q9NQC3 MIR3923-201ENST00000579521 83 ntBASIC6.58□□□□□ -1.36
RTN4Q9NQC3 AC073410.2-201ENST00000603240 332 ntBASIC6.58□□□□□ -1.36
RTN4Q9NQC3 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.58□□□□□ -1.36
RTN4Q9NQC3 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC6.58□□□□□ -1.36
RTN4Q9NQC3 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC6.58□□□□□ -1.36
RTN4Q9NQC3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RTN4Q9NQC3 AC009962.1-201ENST00000567327 3813 ntBASIC6.57□□□□□ -1.36
RTN4Q9NQC3 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
RTN4Q9NQC3 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RTN4Q9NQC3 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
RTN4Q9NQC3 RPS23P7-201ENST00000466210 444 ntBASIC6.57□□□□□ -1.36
RTN4Q9NQC3 RNA5SP96-201ENST00000516041 107 ntBASIC6.57□□□□□ -1.36
RTN4Q9NQC3 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.57□□□□□ -1.36
RTN4Q9NQC3 AC131935.1-201ENST00000524621 333 ntBASIC6.57□□□□□ -1.36
RTN4Q9NQC3 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC6.57□□□□□ -1.36
RTN4Q9NQC3 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC6.57□□□□□ -1.36
RTN4Q9NQC3 AC023824.2-201ENST00000566185 400 ntBASIC6.57□□□□□ -1.36
RTN4Q9NQC3 SNORD98-201ENST00000636377 67 ntBASIC6.57□□□□□ -1.36
RTN4Q9NQC3 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RTN4Q9NQC3 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RTN4Q9NQC3 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RTN4Q9NQC3 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RTN4Q9NQC3 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
RTN4Q9NQC3 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
RTN4Q9NQC3 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
RTN4Q9NQC3 RNU4-90P-201ENST00000362773 141 ntBASIC6.56□□□□□ -1.36
RTN4Q9NQC3 Y_RNA.352-201ENST00000365439 102 ntBASIC6.56□□□□□ -1.36
RTN4Q9NQC3 RNU6-245P-201ENST00000384020 107 ntBASIC6.56□□□□□ -1.36
RTN4Q9NQC3 AL033519.2-201ENST00000403958 392 ntBASIC6.56□□□□□ -1.36
RTN4Q9NQC3 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.56□□□□□ -1.36
RTN4Q9NQC3 RPL7AP28-201ENST00000464513 571 ntBASIC6.56□□□□□ -1.36
RTN4Q9NQC3 AC090525.1-201ENST00000479116 478 ntBASIC6.56□□□□□ -1.36
RTN4Q9NQC3 RN7SL273P-201ENST00000481561 299 ntBASIC6.56□□□□□ -1.36
RTN4Q9NQC3 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.56□□□□□ -1.36
RTN4Q9NQC3 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC6.56□□□□□ -1.36
RTN4Q9NQC3 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.56□□□□□ -1.36
RTN4Q9NQC3 RN7SL290P-201ENST00000578661 300 ntBASIC6.56□□□□□ -1.36
RTN4Q9NQC3 MIR4474-201ENST00000579189 78 ntBASIC6.56□□□□□ -1.36
RTN4Q9NQC3 AC012433.1-201ENST00000588916 398 ntBASIC6.56□□□□□ -1.36
RTN4Q9NQC3 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.56□□□□□ -1.36
RTN4Q9NQC3 uc_338.14-201ENST00000613162 166 ntBASIC6.56□□□□□ -1.36
RTN4Q9NQC3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC6.56□□□□□ -1.36
RTN4Q9NQC3 AC078938.1-201ENST00000620993 318 ntBASIC6.56□□□□□ -1.36
RTN4Q9NQC3 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC6.56□□□□□ -1.36
RTN4Q9NQC3 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
RTN4Q9NQC3 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC6.56□□□□□ -1.36
RTN4Q9NQC3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RTN4Q9NQC3 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.56□□□□□ -1.36
RTN4Q9NQC3 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RTN4Q9NQC3 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RTN4Q9NQC3 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RTN4Q9NQC3 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RTN4Q9NQC3 OR10R3P-201ENST00000361688 942 ntBASIC6.55□□□□□ -1.36
RTN4Q9NQC3 Y_RNA.20-201ENST00000362479 113 ntBASIC6.55□□□□□ -1.36
RTN4Q9NQC3 RNA5SP502-201ENST00000362694 119 ntBASIC6.55□□□□□ -1.36
RTN4Q9NQC3 RNU1-64P-201ENST00000365443 163 ntBASIC6.55□□□□□ -1.36
RTN4Q9NQC3 SNORD6-201ENST00000365444 73 ntBASIC6.55□□□□□ -1.36
RTN4Q9NQC3 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
RTN4Q9NQC3 AL078599.1-201ENST00000402075 293 ntBASIC6.55□□□□□ -1.36
RTN4Q9NQC3 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.55□□□□□ -1.36
RTN4Q9NQC3 CRIP1P1-201ENST00000427567 185 ntBASIC6.55□□□□□ -1.36
RTN4Q9NQC3 AC112220.1-201ENST00000434628 355 ntBASIC6.55□□□□□ -1.36
RTN4Q9NQC3 AL450023.1-201ENST00000450868 751 ntBASIC6.55□□□□□ -1.36
RTN4Q9NQC3 snoU13.14-201ENST00000459372 104 ntBASIC6.55□□□□□ -1.36
RTN4Q9NQC3 SEPT14P8-201ENST00000508026 178 ntBASIC6.55□□□□□ -1.36
RTN4Q9NQC3 AC107222.1-201ENST00000510899 637 ntBASIC6.55□□□□□ -1.36
RTN4Q9NQC3 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC6.55□□□□□ -1.36
RTN4Q9NQC3 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC6.55□□□□□ -1.36
RTN4Q9NQC3 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.55□□□□□ -1.36
RTN4Q9NQC3 AK6P2-201ENST00000549020 471 ntBASIC6.55□□□□□ -1.36
RTN4Q9NQC3 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC6.55□□□□□ -1.36
RTN4Q9NQC3 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.55□□□□□ -1.36
RTN4Q9NQC3 AC037487.3-201ENST00000606668 112 ntBASIC6.55□□□□□ -1.36
RTN4Q9NQC3 AP001282.2-201ENST00000616149 309 ntBASIC6.55□□□□□ -1.36
RTN4Q9NQC3 AC211486.4-201ENST00000621495 113 ntBASIC6.55□□□□□ -1.36
RTN4Q9NQC3 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RTN4Q9NQC3 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
RTN4Q9NQC3 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RTN4Q9NQC3 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.55□□□□□ -1.36
RTN4Q9NQC3 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RTN4Q9NQC3 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.55□□□□□ -1.36
RTN4Q9NQC3 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RTN4Q9NQC3 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms