Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
VCX3AQ9NNX9 NACAP2-201ENST00000318548 624 ntBASIC1.84□□□□□ -2.11
VCX3AQ9NNX9 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
VCX3AQ9NNX9 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.84□□□□□ -2.11
VCX3AQ9NNX9 SNORA44-201ENST00000384584 132 ntBASIC1.84□□□□□ -2.11
VCX3AQ9NNX9 MIR1284-201ENST00000408337 120 ntBASIC1.84□□□□□ -2.11
VCX3AQ9NNX9 PGBD4P6-201ENST00000421501 610 ntBASIC1.84□□□□□ -2.11
VCX3AQ9NNX9 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
VCX3AQ9NNX9 AC019097.1-201ENST00000424783 735 ntBASIC1.84□□□□□ -2.11
VCX3AQ9NNX9 USP9YP8-201ENST00000441913 500 ntBASIC1.84□□□□□ -2.11
VCX3AQ9NNX9 H2AFZP6-201ENST00000444403 394 ntBASIC1.84□□□□□ -2.11
VCX3AQ9NNX9 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.84□□□□□ -2.11
VCX3AQ9NNX9 AC092001.1-201ENST00000453012 261 ntBASIC1.84□□□□□ -2.11
VCX3AQ9NNX9 AC068587.1-201ENST00000483613 781 ntBASIC1.84□□□□□ -2.11
VCX3AQ9NNX9 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.84□□□□□ -2.11
VCX3AQ9NNX9 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.84□□□□□ -2.11
VCX3AQ9NNX9 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.84□□□□□ -2.11
VCX3AQ9NNX9 UBTFL10-201ENST00000528532 562 ntBASIC1.84□□□□□ -2.11
VCX3AQ9NNX9 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.84□□□□□ -2.11
VCX3AQ9NNX9 AC093012.1-202ENST00000549403 582 ntBASIC1.84□□□□□ -2.11
VCX3AQ9NNX9 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.84□□□□□ -2.11
VCX3AQ9NNX9 DEFB122-202ENST00000569013 197 ntBASIC1.84□□□□□ -2.11
VCX3AQ9NNX9 MIR4325-201ENST00000583049 90 ntBASIC1.84□□□□□ -2.11
VCX3AQ9NNX9 AC068620.3-201ENST00000602749 560 ntBASIC1.84□□□□□ -2.11
VCX3AQ9NNX9 MTCYBP22-201ENST00000603788 447 ntBASIC1.84□□□□□ -2.11
VCX3AQ9NNX9 AF129408.1-201ENST00000608767 431 ntBASIC1.84□□□□□ -2.11
VCX3AQ9NNX9 MIR6748-201ENST00000610433 71 ntBASIC1.84□□□□□ -2.11
VCX3AQ9NNX9 AC244517.12-201ENST00000623581 663 ntBASIC1.84□□□□□ -2.11
VCX3AQ9NNX9 AC112204.3-201ENST00000623822 332 ntBASIC1.84□□□□□ -2.11
VCX3AQ9NNX9 AC116618.1-201ENST00000634617 774 ntBASIC1.84□□□□□ -2.11
VCX3AQ9NNX9 Z75746.1-201ENST00000440243 2080 ntBASIC1.84□□□□□ -2.12
VCX3AQ9NNX9 UBE2L2-201ENST00000254302 429 ntBASIC1.83□□□□□ -2.12
VCX3AQ9NNX9 RNA5SP276-201ENST00000362580 94 ntBASIC1.83□□□□□ -2.12
VCX3AQ9NNX9 AL021407.1-201ENST00000404531 386 ntBASIC1.83□□□□□ -2.12
VCX3AQ9NNX9 RNU6ATAC10P-201ENST00000408635 111 ntBASIC1.83□□□□□ -2.12
VCX3AQ9NNX9 RNU2-52P-201ENST00000410680 190 ntBASIC1.83□□□□□ -2.12
VCX3AQ9NNX9 AC096920.1-201ENST00000423991 241 ntBASIC1.83□□□□□ -2.12
VCX3AQ9NNX9 AC063976.3-201ENST00000426849 329 ntBASIC1.83□□□□□ -2.12
VCX3AQ9NNX9 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.83□□□□□ -2.12
VCX3AQ9NNX9 SNRPEP7-201ENST00000438350 220 ntBASIC1.83□□□□□ -2.12
VCX3AQ9NNX9 RPL7P12-201ENST00000446719 750 ntBASIC1.83□□□□□ -2.12
VCX3AQ9NNX9 MTCO2P25-201ENST00000447065 681 ntBASIC1.83□□□□□ -2.12
VCX3AQ9NNX9 ELOCP30-201ENST00000447108 299 ntBASIC1.83□□□□□ -2.12
VCX3AQ9NNX9 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
VCX3AQ9NNX9 PMCHL2-203ENST00000457791 237 ntBASIC1.83□□□□□ -2.12
VCX3AQ9NNX9 BZW1P2-201ENST00000473537 826 ntBASIC1.83□□□□□ -2.12
VCX3AQ9NNX9 AC011005.2-201ENST00000487324 359 ntBASIC1.83□□□□□ -2.12
VCX3AQ9NNX9 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC1.83□□□□□ -2.12
VCX3AQ9NNX9 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.83□□□□□ -2.12
VCX3AQ9NNX9 LRRC6P1-201ENST00000532188 885 ntBASIC1.83□□□□□ -2.12
VCX3AQ9NNX9 MRPS36P5-201ENST00000551909 298 ntBASIC1.83□□□□□ -2.12
VCX3AQ9NNX9 AC233702.2-202ENST00000562547 291 ntBASIC1.83□□□□□ -2.12
VCX3AQ9NNX9 MIR3126-201ENST00000577443 74 ntBASIC1.83□□□□□ -2.12
VCX3AQ9NNX9 MIR3200-201ENST00000580767 85 ntBASIC1.83□□□□□ -2.12
VCX3AQ9NNX9 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.83□□□□□ -2.12
VCX3AQ9NNX9 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC1.83□□□□□ -2.12
VCX3AQ9NNX9 AC010928.2-201ENST00000588017 287 ntBASIC1.83□□□□□ -2.12
VCX3AQ9NNX9 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.83□□□□□ -2.12
VCX3AQ9NNX9 AC091057.3-201ENST00000602684 733 ntBASIC1.83□□□□□ -2.12
VCX3AQ9NNX9 AL355297.2-201ENST00000604792 129 ntBASIC1.83□□□□□ -2.12
VCX3AQ9NNX9 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.83□□□□□ -2.12
VCX3AQ9NNX9 AL627230.6-201ENST00000611129 280 ntBASIC1.83□□□□□ -2.12
VCX3AQ9NNX9 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.83□□□□□ -2.12
VCX3AQ9NNX9 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.83□□□□□ -2.12
VCX3AQ9NNX9 FTO-223ENST00000640179 210 ntTSL 5 BASIC1.83□□□□□ -2.12
VCX3AQ9NNX9 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
VCX3AQ9NNX9 AP006437.1-201ENST00000641440 3685 ntBASIC1.82□□□□□ -2.12
VCX3AQ9NNX9 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
VCX3AQ9NNX9 MIR196B-201ENST00000384852 84 ntBASIC1.82□□□□□ -2.12
VCX3AQ9NNX9 AL359634.1-202ENST00000404721 284 ntBASIC1.82□□□□□ -2.12
VCX3AQ9NNX9 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.82□□□□□ -2.12
VCX3AQ9NNX9 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.82□□□□□ -2.12
VCX3AQ9NNX9 AP000542.1-201ENST00000448473 371 ntBASIC1.82□□□□□ -2.12
VCX3AQ9NNX9 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.82□□□□□ -2.12
VCX3AQ9NNX9 AC034222.1-201ENST00000494052 532 ntBASIC1.82□□□□□ -2.12
VCX3AQ9NNX9 RN7SL636P-201ENST00000497504 294 ntBASIC1.82□□□□□ -2.12
VCX3AQ9NNX9 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
VCX3AQ9NNX9 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.82□□□□□ -2.12
VCX3AQ9NNX9 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.82□□□□□ -2.12
VCX3AQ9NNX9 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.82□□□□□ -2.12
VCX3AQ9NNX9 MIR4529-201ENST00000578110 78 ntBASIC1.82□□□□□ -2.12
VCX3AQ9NNX9 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
VCX3AQ9NNX9 MIR4287-201ENST00000579398 78 ntBASIC1.82□□□□□ -2.12
VCX3AQ9NNX9 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
VCX3AQ9NNX9 BNIP3P23-201ENST00000599655 511 ntBASIC1.82□□□□□ -2.12
VCX3AQ9NNX9 BNIP3P26-201ENST00000600827 554 ntBASIC1.82□□□□□ -2.12
VCX3AQ9NNX9 AC104763.2-201ENST00000604179 382 ntBASIC1.82□□□□□ -2.12
VCX3AQ9NNX9 AL133445.2-201ENST00000611191 527 ntBASIC1.82□□□□□ -2.12
VCX3AQ9NNX9 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
VCX3AQ9NNX9 AP000676.3-201ENST00000623299 569 ntBASIC1.82□□□□□ -2.12
VCX3AQ9NNX9 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.82□□□□□ -2.12
VCX3AQ9NNX9 DDX43P2-201ENST00000604753 1354 ntBASIC1.82□□□□□ -2.12
VCX3AQ9NNX9 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.82□□□□□ -2.12
VCX3AQ9NNX9 RNU6-748P-201ENST00000384648 107 ntBASIC1.81□□□□□ -2.12
VCX3AQ9NNX9 RNU6-298P-201ENST00000390888 96 ntBASIC1.81□□□□□ -2.12
VCX3AQ9NNX9 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms