Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AP001324.2-201ENST00000461163 319 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 KLF3P2-201ENST00000465138 268 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 AC117503.1-201ENST00000472241 394 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 MTND3P3-201ENST00000505004 126 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 AC026427.2-201ENST00000506228 536 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 AC008526.1-201ENST00000509149 338 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 HIGD1AP13-201ENST00000509878 289 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 MRPS33P3-201ENST00000513456 322 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 RNA5SP341-201ENST00000516261 117 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 RNA5SP282-201ENST00000516355 108 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 RNU6-143P-201ENST00000516942 93 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 AC022080.3-201ENST00000544433 482 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 MTND4P33-201ENST00000556706 766 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 CYCSP39-201ENST00000565821 309 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 AGGF1P5-201ENST00000567900 919 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 MTND1P8-201ENST00000571424 950 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 KC877982.1-201ENST00000602313 470 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 AL139022.2-201ENST00000606934 443 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 FRG1KP-201ENST00000623592 341 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 MTND4P35-201ENST00000604257 1375 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 AC005336.3-201ENST00000623833 2679 ntBASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.66□□□□□ -2.14
SND1-IT1Q9HBX3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.65□□□□□ -2.14
SND1-IT1Q9HBX3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
SND1-IT1Q9HBX3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 AL139276.1-201ENST00000311910 1001 ntBASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 SNORD62.1-201ENST00000362541 86 ntBASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 SNORD114-30-201ENST00000364448 72 ntBASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 RNU6-14P-201ENST00000384630 106 ntBASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 MIR34B-201ENST00000385076 84 ntBASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 AL356057.3-201ENST00000402607 340 ntBASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 RNU2-62P-201ENST00000410868 191 ntBASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 AC124916.1-201ENST00000444020 547 ntBASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 DUXAP8-207ENST00000456786 622 ntBASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 AC139453.3-201ENST00000493276 369 ntBASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 AC112673.1-201ENST00000513168 575 ntBASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 MTND2P7-201ENST00000521337 640 ntBASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 MIR4782-201ENST00000577987 79 ntBASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 NRBF2P1-201ENST00000587407 859 ntBASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 BNIP3P9-201ENST00000603714 553 ntBASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 AC104763.2-201ENST00000604179 382 ntBASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 AC007938.3-201ENST00000604965 623 ntBASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 AL450336.1-201ENST00000605180 586 ntBASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 uc_338.12-201ENST00000616344 181 ntBASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SND1-IT1Q9HBX3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.64□□□□□ -2.15
SND1-IT1Q9HBX3 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
SND1-IT1Q9HBX3 SNORA3A-201ENST00000364113 130 ntBASIC1.64□□□□□ -2.15
SND1-IT1Q9HBX3 RNU1-51P-201ENST00000365345 176 ntBASIC1.64□□□□□ -2.15
SND1-IT1Q9HBX3 RNU6-701P-201ENST00000384059 107 ntBASIC1.64□□□□□ -2.15
SND1-IT1Q9HBX3 SNORA41-201ENST00000384675 132 ntBASIC1.64□□□□□ -2.15
SND1-IT1Q9HBX3 MIR9-1-201ENST00000385198 89 ntBASIC1.64□□□□□ -2.15
SND1-IT1Q9HBX3 MIR301A-201ENST00000385261 86 ntBASIC1.64□□□□□ -2.15
SND1-IT1Q9HBX3 MIR1302-8-201ENST00000408342 128 ntBASIC1.64□□□□□ -2.15
SND1-IT1Q9HBX3 AC078974.1-201ENST00000411597 223 ntBASIC1.64□□□□□ -2.15
SND1-IT1Q9HBX3 RPS24P7-201ENST00000416921 246 ntBASIC1.64□□□□□ -2.15
SND1-IT1Q9HBX3 AL353621.1-201ENST00000418219 243 ntBASIC1.64□□□□□ -2.15
SND1-IT1Q9HBX3 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.64□□□□□ -2.15
SND1-IT1Q9HBX3 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.64□□□□□ -2.15
SND1-IT1Q9HBX3 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.64□□□□□ -2.15
SND1-IT1Q9HBX3 AL022400.1-201ENST00000423946 935 ntBASIC1.64□□□□□ -2.15
SND1-IT1Q9HBX3 EIF4EP4-201ENST00000424916 578 ntBASIC1.64□□□□□ -2.15
SND1-IT1Q9HBX3 MTCO2P23-201ENST00000425216 680 ntBASIC1.64□□□□□ -2.15
SND1-IT1Q9HBX3 AL451062.2-201ENST00000427515 271 ntBASIC1.64□□□□□ -2.15
SND1-IT1Q9HBX3 AL592045.1-201ENST00000429867 352 ntBASIC1.64□□□□□ -2.15
SND1-IT1Q9HBX3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.64□□□□□ -2.15
SND1-IT1Q9HBX3 Z98742.2-201ENST00000431564 187 ntBASIC1.64□□□□□ -2.15
SND1-IT1Q9HBX3 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.64□□□□□ -2.15
SND1-IT1Q9HBX3 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms