Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 AL356274.2-201ENST00000624379 3752 ntBASIC3.24□□□□□ -1.89
POLR1BQ9H9Y6 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 MTND5P17-201ENST00000418405 1603 ntBASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 RNU6-188P-201ENST00000364207 107 ntBASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 RNU6-259P-201ENST00000383999 107 ntBASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 RNU6-641P-201ENST00000384006 107 ntBASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 RNU6-140P-201ENST00000384566 108 ntBASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 GSTA9P-201ENST00000406231 611 ntBASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 RPS12P24-201ENST00000412619 387 ntBASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 BTF3L4P3-201ENST00000418879 476 ntBASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 AL109913.1-201ENST00000421173 514 ntBASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 RPL21P40-201ENST00000428586 483 ntBASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 RPL23AP67-201ENST00000465341 474 ntBASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 ARL4AP2-201ENST00000507378 601 ntBASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 Y_RNA.655-201ENST00000515919 96 ntBASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 RNU6-1220P-201ENST00000517126 108 ntBASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 AC009063.1-201ENST00000563342 702 ntBASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 AC005951.1-201ENST00000576706 485 ntBASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 FTX_3.1-201ENST00000610451 147 ntBASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 AC068880.5-201ENST00000624331 290 ntBASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 AC009161.2-201ENST00000624626 138 ntBASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 AC010680.1-201ENST00000590024 3590 ntBASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
POLR1BQ9H9Y6 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 MIR422A-201ENST00000362286 90 ntBASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 SNORA14A-201ENST00000364773 135 ntBASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 RNU6-7-201ENST00000364784 107 ntBASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 RNU6-8-201ENST00000365467 107 ntBASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 RNU6-190P-201ENST00000384154 102 ntBASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 MTCO2P11-201ENST00000431069 680 ntBASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 GPM6BP2-201ENST00000432046 144 ntBASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 AL358934.1-201ENST00000432346 324 ntBASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 AC009969.1-201ENST00000438726 172 ntBASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 MTND4P25-201ENST00000441039 533 ntBASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 GPM6BP1-201ENST00000446387 144 ntBASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 NANOGNBP1-201ENST00000448444 480 ntBASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 FABP5P15-201ENST00000453566 214 ntBASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 AC116562.3-201ENST00000506136 177 ntBASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 MTND2P33-201ENST00000506452 1031 ntBASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 AC108078.1-201ENST00000508073 725 ntBASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 SNORD27.1-201ENST00000516319 72 ntBASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 RNU6-143P-201ENST00000516942 93 ntBASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 RNA5SP471-201ENST00000516971 106 ntBASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 AC107934.2-201ENST00000518653 310 ntBASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 AC245166.1-201ENST00000521012 253 ntBASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 AC068587.5-201ENST00000528506 175 ntBASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 AC073657.2-201ENST00000605661 303 ntBASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 AC015540.1-201ENST00000615828 501 ntBASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.22□□□□□ -1.89
POLR1BQ9H9Y6 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
POLR1BQ9H9Y6 RNU6-270P-201ENST00000364131 105 ntBASIC3.21□□□□□ -1.9
POLR1BQ9H9Y6 Y_RNA.296-201ENST00000364930 108 ntBASIC3.21□□□□□ -1.9
POLR1BQ9H9Y6 RNU1-140P-201ENST00000365040 165 ntBASIC3.21□□□□□ -1.9
POLR1BQ9H9Y6 RNU6-282P-201ENST00000365357 103 ntBASIC3.21□□□□□ -1.9
POLR1BQ9H9Y6 RNU6-74P-201ENST00000384235 107 ntBASIC3.21□□□□□ -1.9
POLR1BQ9H9Y6 RNU6-456P-201ENST00000384493 107 ntBASIC3.21□□□□□ -1.9
POLR1BQ9H9Y6 MIR888-201ENST00000401186 77 ntBASIC3.21□□□□□ -1.9
POLR1BQ9H9Y6 AL138885.1-201ENST00000405921 675 ntBASIC3.21□□□□□ -1.9
POLR1BQ9H9Y6 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC3.21□□□□□ -1.9
POLR1BQ9H9Y6 AC080125.1-201ENST00000414888 684 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms