Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 Y_RNA.534-201ENST00000384599 112 ntBASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 MIR558-201ENST00000384920 94 ntBASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 MIR183-201ENST00000384958 110 ntBASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 SNORA48.7-201ENST00000391302 135 ntBASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 AL357075.1-201ENST00000404107 726 ntBASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 RNU6-195P-201ENST00000411352 109 ntBASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 AC245054.2-201ENST00000415639 319 ntBASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 AC114491.1-201ENST00000416095 246 ntBASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 AL158156.1-201ENST00000422509 473 ntBASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 MED13P1-201ENST00000428342 171 ntBASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 AL591704.1-201ENST00000432574 275 ntBASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 AL022238.1-201ENST00000442557 355 ntBASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 AL136380.1-201ENST00000447970 162 ntBASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 DPPA3P1-201ENST00000448050 469 ntBASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 GAPDHP17-201ENST00000449858 1001 ntBASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 PRSS3P4-201ENST00000453323 162 ntBASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 SNORD42A-201ENST00000459584 64 ntBASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 RPL23AP70-201ENST00000483361 460 ntBASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 AC117522.1-201ENST00000509821 380 ntBASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 AC098591.2-201ENST00000510152 315 ntBASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 AC010486.3-201ENST00000511602 785 ntBASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 AC091965.2-201ENST00000512324 613 ntBASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 AP003122.3-201ENST00000526316 255 ntBASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 AC084851.1-201ENST00000529105 249 ntBASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 AC021739.1-201ENST00000559631 174 ntBASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 AL451007.1-201ENST00000595491 289 ntBASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 AC073544.2-201ENST00000601155 540 ntBASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 AC019159.1-201ENST00000605094 187 ntBASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 MIR15A-201ENST00000607334 83 ntBASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 FARSBP1-201ENST00000435808 1778 ntBASIC3.12□□□□□ -1.91
CCDC68Q9H2F9 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 RNA5SP72-201ENST00000364442 117 ntBASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 RNU1-109P-201ENST00000383960 147 ntBASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 SNORD15B-201ENST00000384714 146 ntBASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 FO393413.1-201ENST00000402892 195 ntBASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 RNA5SP274-201ENST00000410484 108 ntBASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 AC080125.1-201ENST00000414888 684 ntBASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 AC009518.2-201ENST00000418056 731 ntBASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 AC090960.1-201ENST00000421072 306 ntBASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 AL109913.1-201ENST00000421173 514 ntBASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 AC073614.1-201ENST00000438690 650 ntBASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 AL513043.1-201ENST00000439124 535 ntBASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 HMGN2P10-201ENST00000448085 265 ntBASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 RN7SL863P-201ENST00000462370 296 ntBASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 AC026801.1-201ENST00000497178 464 ntBASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 AC109927.2-201ENST00000506416 303 ntBASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 RNU6-1220P-201ENST00000517126 108 ntBASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 RNU6-1315P-201ENST00000517187 99 ntBASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 AC087883.1-201ENST00000551882 391 ntBASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 AC007151.1-201ENST00000572774 483 ntBASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 MIR3167-201ENST00000579623 85 ntBASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 AC103810.1-201ENST00000579873 453 ntBASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 AC084757.4-201ENST00000616350 526 ntBASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 AC138932.5-201ENST00000617759 563 ntBASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 MIR7975-201ENST00000619350 68 ntBASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 AC012314.7-201ENST00000619693 93 ntBASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 MIR7515-201ENST00000637837 67 ntBASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
CCDC68Q9H2F9 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC68Q9H2F9 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC68Q9H2F9 SNORA11-201ENST00000408789 128 ntBASIC3.1□□□□□ -1.91
CCDC68Q9H2F9 RNU4-47P-201ENST00000410876 114 ntBASIC3.1□□□□□ -1.91
CCDC68Q9H2F9 RN7SKP142-201ENST00000411236 328 ntBASIC3.1□□□□□ -1.91
CCDC68Q9H2F9 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.1□□□□□ -1.91
CCDC68Q9H2F9 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC68Q9H2F9 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC68Q9H2F9 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC68Q9H2F9 AC009961.2-201ENST00000435771 251 ntBASIC3.1□□□□□ -1.91
CCDC68Q9H2F9 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.1□□□□□ -1.91
CCDC68Q9H2F9 BRK1P2-201ENST00000442875 223 ntBASIC3.1□□□□□ -1.91
CCDC68Q9H2F9 OSTCP8-201ENST00000445117 448 ntBASIC3.1□□□□□ -1.91
CCDC68Q9H2F9 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC68Q9H2F9 AC233279.1-201ENST00000455300 423 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms