Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC113Q9H0I3 RANP8-201ENST00000444720 713 ntBASIC4.43□□□□□ -1.7
CCDC113Q9H0I3 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC113Q9H0I3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC113Q9H0I3 RN7SL585P-201ENST00000470538 280 ntBASIC4.43□□□□□ -1.7
CCDC113Q9H0I3 RPL30P5-201ENST00000494923 336 ntBASIC4.43□□□□□ -1.7
CCDC113Q9H0I3 HMGN1P13-201ENST00000505795 138 ntBASIC4.43□□□□□ -1.7
CCDC113Q9H0I3 RNU6-1332P-201ENST00000516666 104 ntBASIC4.43□□□□□ -1.7
CCDC113Q9H0I3 RNA5SP165-201ENST00000517142 115 ntBASIC4.43□□□□□ -1.7
CCDC113Q9H0I3 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC113Q9H0I3 AP003122.3-201ENST00000526316 255 ntBASIC4.43□□□□□ -1.7
CCDC113Q9H0I3 AC084851.1-201ENST00000529105 249 ntBASIC4.43□□□□□ -1.7
CCDC113Q9H0I3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC113Q9H0I3 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC113Q9H0I3 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC113Q9H0I3 AC007151.1-201ENST00000572774 483 ntBASIC4.43□□□□□ -1.7
CCDC113Q9H0I3 AC025627.2-201ENST00000576220 160 ntBASIC4.43□□□□□ -1.7
CCDC113Q9H0I3 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC113Q9H0I3 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC113Q9H0I3 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.43□□□□□ -1.7
CCDC113Q9H0I3 AC008725.1-201ENST00000605123 2263 ntBASIC4.43□□□□□ -1.7
CCDC113Q9H0I3 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC113Q9H0I3 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC113Q9H0I3 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC113Q9H0I3 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 RNU6-266P-201ENST00000364225 107 ntBASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 RNU6-1303P-201ENST00000364841 107 ntBASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 Y_RNA.431-201ENST00000384086 102 ntBASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 MIR548F5-201ENST00000408421 86 ntBASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 RNA5SP306-201ENST00000411087 107 ntBASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 TMEM167AP1-201ENST00000423409 219 ntBASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 AL691449.1-201ENST00000426570 421 ntBASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 NDUFB4P6-201ENST00000436819 366 ntBASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 AL356535.1-201ENST00000440335 398 ntBASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 Y_RNA.635-201ENST00000459041 101 ntBASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 MTND4P17-201ENST00000470444 350 ntBASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 AC117503.1-201ENST00000472241 394 ntBASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 AC026402.1-201ENST00000513642 170 ntBASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 RNA5SP454-201ENST00000517231 127 ntBASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 YPEL5P3-201ENST00000547227 352 ntBASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 AL356055.1-201ENST00000602528 446 ntBASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 NUTF2P8-201ENST00000604593 363 ntBASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 AL353621.2-201ENST00000605340 133 ntBASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 AF117829.1-206ENST00000621883 3802 ntBASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC113Q9H0I3 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 SNORD35B-201ENST00000363660 87 ntBASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 SNORD116-11-201ENST00000383882 92 ntBASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 RNU6-128P-201ENST00000383976 107 ntBASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 RNU6-214P-201ENST00000384130 107 ntBASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 Y_RNA.474-201ENST00000384341 102 ntBASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 HSPE1P26-201ENST00000405341 275 ntBASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 RNU2-37P-201ENST00000410695 177 ntBASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 RPL37P10-201ENST00000412884 288 ntBASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 YPEL5P1-201ENST00000419731 367 ntBASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 SNAP23P1-201ENST00000433229 246 ntBASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 AL512844.2-201ENST00000433990 593 ntBASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 RPL9P32-201ENST00000464118 620 ntBASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 AC104472.2-201ENST00000469035 601 ntBASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 AC022493.1-201ENST00000492984 337 ntBASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 AC025554.1-201ENST00000505641 188 ntBASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 RN7SKP24-201ENST00000515888 284 ntBASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 RNU1-61P-201ENST00000516107 151 ntBASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 AC023043.2-201ENST00000589678 1026 ntBASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 AC245389.1-201ENST00000605141 529 ntBASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 AC004805.2-201ENST00000605382 482 ntBASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 AC135507.2-201ENST00000612443 309 ntBASIC4.41□□□□□ -1.7
CCDC113Q9H0I3 AL442067.2-201ENST00000614033 363 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms