Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.05□□□□□ -2.08
UPF3BQ9BZI7 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.05□□□□□ -2.08
UPF3BQ9BZI7 RNU4-62P-201ENST00000410125 130 ntBASIC2.05□□□□□ -2.08
UPF3BQ9BZI7 RNU2-33P-201ENST00000410344 192 ntBASIC2.05□□□□□ -2.08
UPF3BQ9BZI7 RNU4-27P-201ENST00000410889 139 ntBASIC2.05□□□□□ -2.08
UPF3BQ9BZI7 AP000275.1-201ENST00000411943 390 ntBASIC2.05□□□□□ -2.08
UPF3BQ9BZI7 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC2.05□□□□□ -2.08
UPF3BQ9BZI7 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.05□□□□□ -2.08
UPF3BQ9BZI7 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.05□□□□□ -2.08
UPF3BQ9BZI7 AC105252.1-201ENST00000503089 286 ntBASIC2.05□□□□□ -2.08
UPF3BQ9BZI7 AC022447.3-201ENST00000506865 495 ntBASIC2.05□□□□□ -2.08
UPF3BQ9BZI7 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.05□□□□□ -2.08
UPF3BQ9BZI7 AC010460.2-201ENST00000509054 677 ntBASIC2.05□□□□□ -2.08
UPF3BQ9BZI7 RNU7-193P-201ENST00000516723 65 ntBASIC2.05□□□□□ -2.08
UPF3BQ9BZI7 AC022662.1-201ENST00000580252 331 ntBASIC2.05□□□□□ -2.08
UPF3BQ9BZI7 MIR3618-201ENST00000580330 88 ntBASIC2.05□□□□□ -2.08
UPF3BQ9BZI7 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
UPF3BQ9BZI7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
UPF3BQ9BZI7 RNU6-792P-201ENST00000363490 107 ntBASIC2.04□□□□□ -2.08
UPF3BQ9BZI7 MIR676-201ENST00000390702 67 ntBASIC2.04□□□□□ -2.08
UPF3BQ9BZI7 AL109755.1-201ENST00000401791 649 ntBASIC2.04□□□□□ -2.08
UPF3BQ9BZI7 AL021407.1-201ENST00000404531 386 ntBASIC2.04□□□□□ -2.08
UPF3BQ9BZI7 CIR1P3-201ENST00000405137 479 ntBASIC2.04□□□□□ -2.08
UPF3BQ9BZI7 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC2.04□□□□□ -2.08
UPF3BQ9BZI7 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.04□□□□□ -2.08
UPF3BQ9BZI7 RPL7P55-201ENST00000450522 746 ntBASIC2.04□□□□□ -2.08
UPF3BQ9BZI7 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.04□□□□□ -2.08
UPF3BQ9BZI7 RPS20P20-201ENST00000460498 340 ntBASIC2.04□□□□□ -2.08
UPF3BQ9BZI7 KLF3P2-201ENST00000465138 268 ntBASIC2.04□□□□□ -2.08
UPF3BQ9BZI7 DYNLL1P5-201ENST00000467158 270 ntBASIC2.04□□□□□ -2.08
UPF3BQ9BZI7 HMGB3P17-201ENST00000504195 649 ntBASIC2.04□□□□□ -2.08
UPF3BQ9BZI7 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.04□□□□□ -2.08
UPF3BQ9BZI7 AC010468.3-201ENST00000508225 458 ntBASIC2.04□□□□□ -2.08
UPF3BQ9BZI7 AC006499.2-201ENST00000513470 337 ntBASIC2.04□□□□□ -2.08
UPF3BQ9BZI7 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.04□□□□□ -2.08
UPF3BQ9BZI7 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
UPF3BQ9BZI7 AC007375.1-201ENST00000554513 578 ntBASIC2.04□□□□□ -2.08
UPF3BQ9BZI7 AL359212.1-201ENST00000556608 614 ntBASIC2.04□□□□□ -2.08
UPF3BQ9BZI7 AL354943.1-201ENST00000572103 781 ntBASIC2.04□□□□□ -2.08
UPF3BQ9BZI7 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.04□□□□□ -2.08
UPF3BQ9BZI7 SNORA4-201ENST00000584302 138 ntBASIC2.04□□□□□ -2.08
UPF3BQ9BZI7 BX248123.2-201ENST00000606318 124 ntBASIC2.04□□□□□ -2.08
UPF3BQ9BZI7 MIR8081-201ENST00000611533 95 ntBASIC2.04□□□□□ -2.08
UPF3BQ9BZI7 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.04□□□□□ -2.08
UPF3BQ9BZI7 AC084768.2-201ENST00000622736 221 ntBASIC2.04□□□□□ -2.08
UPF3BQ9BZI7 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.04□□□□□ -2.08
UPF3BQ9BZI7 MTND1P37-201ENST00000636562 264 ntBASIC2.04□□□□□ -2.08
UPF3BQ9BZI7 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
UPF3BQ9BZI7 RNU6-140P-201ENST00000384566 108 ntBASIC2.03□□□□□ -2.08
UPF3BQ9BZI7 USP9YP6-201ENST00000413550 854 ntBASIC2.03□□□□□ -2.08
UPF3BQ9BZI7 MTATP6P27-201ENST00000416987 621 ntBASIC2.03□□□□□ -2.08
UPF3BQ9BZI7 CYCSP48-201ENST00000417124 323 ntBASIC2.03□□□□□ -2.08
UPF3BQ9BZI7 ZNF90P2-204ENST00000419323 1075 ntBASIC2.03□□□□□ -2.08
UPF3BQ9BZI7 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.03□□□□□ -2.08
UPF3BQ9BZI7 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.03□□□□□ -2.08
UPF3BQ9BZI7 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.03□□□□□ -2.08
UPF3BQ9BZI7 AC098831.1-201ENST00000440661 216 ntBASIC2.03□□□□□ -2.08
UPF3BQ9BZI7 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.03□□□□□ -2.08
UPF3BQ9BZI7 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.03□□□□□ -2.08
UPF3BQ9BZI7 ATG12P2-201ENST00000456830 416 ntBASIC2.03□□□□□ -2.08
UPF3BQ9BZI7 RPL26P9-201ENST00000457466 433 ntBASIC2.03□□□□□ -2.08
UPF3BQ9BZI7 AC026410.2-201ENST00000460281 156 ntBASIC2.03□□□□□ -2.08
UPF3BQ9BZI7 RNU6-528P-201ENST00000516926 100 ntBASIC2.03□□□□□ -2.08
UPF3BQ9BZI7 DNAJC19P9-201ENST00000555084 351 ntBASIC2.03□□□□□ -2.08
UPF3BQ9BZI7 RPS3AP4-201ENST00000555161 764 ntBASIC2.03□□□□□ -2.08
UPF3BQ9BZI7 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.03□□□□□ -2.08
UPF3BQ9BZI7 AL109918.3-201ENST00000603072 338 ntBASIC2.03□□□□□ -2.08
UPF3BQ9BZI7 AP000403.1-201ENST00000603349 851 ntBASIC2.03□□□□□ -2.08
UPF3BQ9BZI7 OR4H6P-202ENST00000603819 340 ntBASIC2.03□□□□□ -2.08
UPF3BQ9BZI7 U4atac.1-201ENST00000618345 95 ntBASIC2.03□□□□□ -2.08
UPF3BQ9BZI7 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.03□□□□□ -2.08
UPF3BQ9BZI7 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.09
UPF3BQ9BZI7 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
UPF3BQ9BZI7 RNU6-650P-201ENST00000365658 111 ntBASIC2.02□□□□□ -2.09
UPF3BQ9BZI7 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
UPF3BQ9BZI7 RNU6-481P-201ENST00000384194 107 ntBASIC2.02□□□□□ -2.09
UPF3BQ9BZI7 U6atac.2-201ENST00000408644 118 ntBASIC2.02□□□□□ -2.09
UPF3BQ9BZI7 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.02□□□□□ -2.09
UPF3BQ9BZI7 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.02□□□□□ -2.09
UPF3BQ9BZI7 EIF4EP4-201ENST00000424916 578 ntBASIC2.02□□□□□ -2.09
UPF3BQ9BZI7 AC008850.1-201ENST00000427546 362 ntBASIC2.02□□□□□ -2.09
UPF3BQ9BZI7 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.02□□□□□ -2.09
UPF3BQ9BZI7 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
UPF3BQ9BZI7 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.02□□□□□ -2.09
UPF3BQ9BZI7 AC055855.1-201ENST00000489563 579 ntBASIC2.02□□□□□ -2.09
UPF3BQ9BZI7 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
UPF3BQ9BZI7 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.02□□□□□ -2.09
UPF3BQ9BZI7 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
UPF3BQ9BZI7 MIR892C-201ENST00000516410 77 ntBASIC2.02□□□□□ -2.09
UPF3BQ9BZI7 NDUFA5P6-201ENST00000542110 379 ntBASIC2.02□□□□□ -2.09
UPF3BQ9BZI7 AC125611.1-201ENST00000549563 229 ntBASIC2.02□□□□□ -2.09
UPF3BQ9BZI7 AL133241.1-201ENST00000556832 487 ntBASIC2.02□□□□□ -2.09
UPF3BQ9BZI7 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.02□□□□□ -2.09
UPF3BQ9BZI7 AC007151.1-201ENST00000572774 483 ntBASIC2.02□□□□□ -2.09
UPF3BQ9BZI7 ZNF92P2-201ENST00000600543 1059 ntBASIC2.02□□□□□ -2.09
UPF3BQ9BZI7 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.02□□□□□ -2.09
UPF3BQ9BZI7 AL391813.1-201ENST00000603098 260 ntBASIC2.02□□□□□ -2.09
UPF3BQ9BZI7 AL096840.1-201ENST00000603287 93 ntBASIC2.02□□□□□ -2.09
UPF3BQ9BZI7 AL512598.1-201ENST00000610158 273 ntBASIC2.02□□□□□ -2.09
UPF3BQ9BZI7 AL627230.6-201ENST00000611129 280 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms