Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 AC112220.1-201ENST00000434628 355 ntBASIC3.47□□□□□ -1.85
MEIS3Q99687 AC105272.1-201ENST00000438604 198 ntBASIC3.47□□□□□ -1.85
MEIS3Q99687 SEPT14P3-201ENST00000439401 183 ntBASIC3.47□□□□□ -1.85
MEIS3Q99687 AL732372.2-207ENST00000445840 183 ntBASIC3.47□□□□□ -1.85
MEIS3Q99687 MRPL50P4-201ENST00000446432 475 ntBASIC3.47□□□□□ -1.85
MEIS3Q99687 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.47□□□□□ -1.85
MEIS3Q99687 SEPT14P2-201ENST00000453405 183 ntBASIC3.47□□□□□ -1.85
MEIS3Q99687 snoU13.7-201ENST00000459220 104 ntBASIC3.47□□□□□ -1.85
MEIS3Q99687 AC083798.1-201ENST00000472671 131 ntBASIC3.47□□□□□ -1.85
MEIS3Q99687 AC104563.1-201ENST00000476147 376 ntBASIC3.47□□□□□ -1.85
MEIS3Q99687 AC090525.1-201ENST00000479116 478 ntBASIC3.47□□□□□ -1.85
MEIS3Q99687 RN7SL283P-201ENST00000489055 303 ntBASIC3.47□□□□□ -1.85
MEIS3Q99687 AC034222.1-201ENST00000494052 532 ntBASIC3.47□□□□□ -1.85
MEIS3Q99687 SEPT14P4-201ENST00000513445 186 ntBASIC3.47□□□□□ -1.85
MEIS3Q99687 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.47□□□□□ -1.85
MEIS3Q99687 RNA5SP337-201ENST00000517007 109 ntBASIC3.47□□□□□ -1.85
MEIS3Q99687 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.47□□□□□ -1.85
MEIS3Q99687 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.47□□□□□ -1.85
MEIS3Q99687 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.47□□□□□ -1.85
MEIS3Q99687 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.47□□□□□ -1.85
MEIS3Q99687 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.47□□□□□ -1.85
MEIS3Q99687 AC107953.1-201ENST00000522216 297 ntBASIC3.47□□□□□ -1.85
MEIS3Q99687 FO082796.1-201ENST00000523795 183 ntBASIC3.47□□□□□ -1.85
MEIS3Q99687 AC243972.3-201ENST00000539655 198 ntBASIC3.47□□□□□ -1.85
MEIS3Q99687 AC023050.3-201ENST00000541142 333 ntBASIC3.47□□□□□ -1.85
MEIS3Q99687 AC135001.1-201ENST00000544546 283 ntBASIC3.47□□□□□ -1.85
MEIS3Q99687 ZNF861P-201ENST00000588126 639 ntBASIC3.47□□□□□ -1.85
MEIS3Q99687 AC018638.8-201ENST00000588755 281 ntBASIC3.47□□□□□ -1.85
MEIS3Q99687 AC010525.2-201ENST00000590920 195 ntBASIC3.47□□□□□ -1.85
MEIS3Q99687 AC011468.4-201ENST00000603942 409 ntBASIC3.47□□□□□ -1.85
MEIS3Q99687 AC121334.2-201ENST00000605387 271 ntBASIC3.47□□□□□ -1.85
MEIS3Q99687 AL133255.1-201ENST00000606374 441 ntBASIC3.47□□□□□ -1.85
MEIS3Q99687 AC107294.3-201ENST00000609211 526 ntBASIC3.47□□□□□ -1.85
MEIS3Q99687 AC112204.3-201ENST00000623822 332 ntBASIC3.47□□□□□ -1.85
MEIS3Q99687 AC009161.2-201ENST00000624626 138 ntBASIC3.47□□□□□ -1.85
MEIS3Q99687 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
MEIS3Q99687 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.47□□□□□ -1.85
MEIS3Q99687 AL139811.1-201ENST00000424779 2299 ntBASIC3.47□□□□□ -1.85
MEIS3Q99687 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
MEIS3Q99687 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
MEIS3Q99687 MTND5P27-201ENST00000428871 1720 ntBASIC3.47□□□□□ -1.85
MEIS3Q99687 MTND5P33-201ENST00000571250 1450 ntBASIC3.47□□□□□ -1.85
MEIS3Q99687 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
MEIS3Q99687 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
MEIS3Q99687 AC130650.2-201ENST00000618736 2403 ntBASIC3.46□□□□□ -1.85
MEIS3Q99687 ASNSP3-201ENST00000451989 1306 ntBASIC3.46□□□□□ -1.85
MEIS3Q99687 CKAP2P1-201ENST00000555477 2049 ntBASIC3.46□□□□□ -1.86
MEIS3Q99687 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
MEIS3Q99687 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
MEIS3Q99687 RNU4-79P-201ENST00000362764 141 ntBASIC3.46□□□□□ -1.86
MEIS3Q99687 SNORA32.2-201ENST00000384049 122 ntBASIC3.46□□□□□ -1.86
MEIS3Q99687 Y_RNA.481-201ENST00000384373 102 ntBASIC3.46□□□□□ -1.86
MEIS3Q99687 AL590004.2-201ENST00000404787 371 ntBASIC3.46□□□□□ -1.86
MEIS3Q99687 AL162578.1-201ENST00000406202 378 ntBASIC3.46□□□□□ -1.86
MEIS3Q99687 AL354751.2-201ENST00000415471 210 ntBASIC3.46□□□□□ -1.86
MEIS3Q99687 ELOCP4-201ENST00000420090 333 ntBASIC3.46□□□□□ -1.86
MEIS3Q99687 SNRPEP10-201ENST00000420249 274 ntBASIC3.46□□□□□ -1.86
MEIS3Q99687 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.46□□□□□ -1.86
MEIS3Q99687 AC096632.1-201ENST00000427395 310 ntBASIC3.46□□□□□ -1.86
MEIS3Q99687 PSMA6P3-201ENST00000428242 164 ntBASIC3.46□□□□□ -1.86
MEIS3Q99687 AC244505.4-201ENST00000434905 287 ntBASIC3.46□□□□□ -1.86
MEIS3Q99687 RPL23AP74-201ENST00000437246 471 ntBASIC3.46□□□□□ -1.86
MEIS3Q99687 AC016691.1-201ENST00000441321 413 ntBASIC3.46□□□□□ -1.86
MEIS3Q99687 RPS24P13-201ENST00000442520 397 ntBASIC3.46□□□□□ -1.86
MEIS3Q99687 SSXP5-201ENST00000443473 287 ntBASIC3.46□□□□□ -1.86
MEIS3Q99687 TRBV26-201ENST00000456572 344 ntBASIC3.46□□□□□ -1.86
MEIS3Q99687 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.46□□□□□ -1.86
MEIS3Q99687 snoU13.24-201ENST00000458998 104 ntBASIC3.46□□□□□ -1.86
MEIS3Q99687 PABPC1P3-201ENST00000469174 459 ntBASIC3.46□□□□□ -1.86
MEIS3Q99687 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.46□□□□□ -1.86
MEIS3Q99687 AP000893.1-201ENST00000474462 794 ntBASIC3.46□□□□□ -1.86
MEIS3Q99687 AC078817.1-201ENST00000492623 435 ntBASIC3.46□□□□□ -1.86
MEIS3Q99687 AC117522.3-201ENST00000507974 584 ntBASIC3.46□□□□□ -1.86
MEIS3Q99687 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC3.46□□□□□ -1.86
MEIS3Q99687 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.46□□□□□ -1.86
MEIS3Q99687 GMPSP1-201ENST00000514075 579 ntBASIC3.46□□□□□ -1.86
MEIS3Q99687 RNA5SP380-201ENST00000517190 98 ntBASIC3.46□□□□□ -1.86
MEIS3Q99687 IGKV2-23-201ENST00000518729 323 ntBASIC3.46□□□□□ -1.86
MEIS3Q99687 AC090572.1-201ENST00000519251 160 ntBASIC3.46□□□□□ -1.86
MEIS3Q99687 OR4P1P-201ENST00000530808 1136 ntBASIC3.46□□□□□ -1.86
MEIS3Q99687 AP000907.2-201ENST00000530827 353 ntBASIC3.46□□□□□ -1.86
MEIS3Q99687 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.46□□□□□ -1.86
MEIS3Q99687 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.46□□□□□ -1.86
MEIS3Q99687 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.46□□□□□ -1.86
MEIS3Q99687 AC078795.3-201ENST00000602913 472 ntBASIC3.46□□□□□ -1.86
MEIS3Q99687 AC004825.2-201ENST00000616634 455 ntBASIC3.46□□□□□ -1.86
MEIS3Q99687 AL354950.2-201ENST00000617939 290 ntBASIC3.46□□□□□ -1.86
MEIS3Q99687 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.46□□□□□ -1.86
MEIS3Q99687 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.46□□□□□ -1.86
MEIS3Q99687 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.46□□□□□ -1.86
MEIS3Q99687 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
MEIS3Q99687 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
MEIS3Q99687 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
MEIS3Q99687 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.45□□□□□ -1.86
MEIS3Q99687 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
MEIS3Q99687 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
MEIS3Q99687 XPOTP1-201ENST00000443317 2398 ntBASIC3.45□□□□□ -1.86
MEIS3Q99687 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
MEIS3Q99687 NACAP2-201ENST00000318548 624 ntBASIC3.45□□□□□ -1.86
MEIS3Q99687 Y_RNA.67-201ENST00000362870 100 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms