Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.97□□□□□ -2.09
LINC00477Q96M19 AF131215.7-201ENST00000602443 707 ntBASIC1.97□□□□□ -2.09
LINC00477Q96M19 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.97□□□□□ -2.09
LINC00477Q96M19 AC007038.2-201ENST00000608095 740 ntBASIC1.97□□□□□ -2.09
LINC00477Q96M19 AC103710.2-201ENST00000609912 942 ntBASIC1.97□□□□□ -2.09
LINC00477Q96M19 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.97□□□□□ -2.09
LINC00477Q96M19 AC245884.12-201ENST00000615364 59 ntBASIC1.97□□□□□ -2.09
LINC00477Q96M19 AC078883.4-201ENST00000623218 367 ntBASIC1.97□□□□□ -2.09
LINC00477Q96M19 MIR3974-201ENST00000637126 96 ntBASIC1.97□□□□□ -2.09
LINC00477Q96M19 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
LINC00477Q96M19 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
LINC00477Q96M19 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.96□□□□□ -2.09
LINC00477Q96M19 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.96□□□□□ -2.09
LINC00477Q96M19 ZNF271P-202ENST00000465539 1970 ntBASIC1.96□□□□□ -2.1
LINC00477Q96M19 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
LINC00477Q96M19 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC1.96□□□□□ -2.1
LINC00477Q96M19 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
LINC00477Q96M19 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
LINC00477Q96M19 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
LINC00477Q96M19 RNU5A-1-201ENST00000362698 116 ntBASIC1.96□□□□□ -2.1
LINC00477Q96M19 SNORD116-2-201ENST00000384274 95 ntBASIC1.96□□□□□ -2.1
LINC00477Q96M19 SNORD116-1-201ENST00000384335 95 ntBASIC1.96□□□□□ -2.1
LINC00477Q96M19 RNU6-1035P-201ENST00000384477 107 ntBASIC1.96□□□□□ -2.1
LINC00477Q96M19 SNORD116-6-201ENST00000384711 96 ntBASIC1.96□□□□□ -2.1
LINC00477Q96M19 RNU2-36P-201ENST00000410361 191 ntBASIC1.96□□□□□ -2.1
LINC00477Q96M19 Y_RNA.608-201ENST00000410647 95 ntBASIC1.96□□□□□ -2.1
LINC00477Q96M19 AF274854.1-201ENST00000413236 615 ntBASIC1.96□□□□□ -2.1
LINC00477Q96M19 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.96□□□□□ -2.1
LINC00477Q96M19 SEPT2P1-201ENST00000419651 180 ntBASIC1.96□□□□□ -2.1
LINC00477Q96M19 Z99497.1-201ENST00000421282 135 ntBASIC1.96□□□□□ -2.1
LINC00477Q96M19 AC099548.1-201ENST00000421443 426 ntBASIC1.96□□□□□ -2.1
LINC00477Q96M19 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.96□□□□□ -2.1
LINC00477Q96M19 AC019097.1-201ENST00000424783 735 ntBASIC1.96□□□□□ -2.1
LINC00477Q96M19 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
LINC00477Q96M19 TIMM9P1-201ENST00000436122 256 ntBASIC1.96□□□□□ -2.1
LINC00477Q96M19 RPS12P2-201ENST00000439728 269 ntBASIC1.96□□□□□ -2.1
LINC00477Q96M19 RPS24P13-201ENST00000442520 397 ntBASIC1.96□□□□□ -2.1
LINC00477Q96M19 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.96□□□□□ -2.1
LINC00477Q96M19 WASF1P1-201ENST00000447560 1131 ntBASIC1.96□□□□□ -2.1
LINC00477Q96M19 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.96□□□□□ -2.1
LINC00477Q96M19 AC093534.1-201ENST00000504977 132 ntBASIC1.96□□□□□ -2.1
LINC00477Q96M19 AC026427.2-201ENST00000506228 536 ntBASIC1.96□□□□□ -2.1
LINC00477Q96M19 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC1.96□□□□□ -2.1
LINC00477Q96M19 MTND1P22-201ENST00000510572 951 ntBASIC1.96□□□□□ -2.1
LINC00477Q96M19 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.96□□□□□ -2.1
LINC00477Q96M19 IGLV3-17-201ENST00000519099 244 ntBASIC1.96□□□□□ -2.1
LINC00477Q96M19 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.96□□□□□ -2.1
LINC00477Q96M19 HMGB1P41-201ENST00000520234 440 ntBASIC1.96□□□□□ -2.1
LINC00477Q96M19 AC100870.1-201ENST00000522035 505 ntBASIC1.96□□□□□ -2.1
LINC00477Q96M19 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.96□□□□□ -2.1
LINC00477Q96M19 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC1.96□□□□□ -2.1
LINC00477Q96M19 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.96□□□□□ -2.1
LINC00477Q96M19 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.96□□□□□ -2.1
LINC00477Q96M19 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC1.96□□□□□ -2.1
LINC00477Q96M19 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.96□□□□□ -2.1
LINC00477Q96M19 AC009127.3-201ENST00000570531 403 ntBASIC1.96□□□□□ -2.1
LINC00477Q96M19 MIR5195-201ENST00000583555 115 ntBASIC1.96□□□□□ -2.1
LINC00477Q96M19 AC009977.1-201ENST00000586015 570 ntBASIC1.96□□□□□ -2.1
LINC00477Q96M19 AC119751.7-201ENST00000600494 245 ntBASIC1.96□□□□□ -2.1
LINC00477Q96M19 AC004987.4-201ENST00000603383 338 ntBASIC1.96□□□□□ -2.1
LINC00477Q96M19 AC135507.1-201ENST00000607214 561 ntBASIC1.96□□□□□ -2.1
LINC00477Q96M19 AC138749.5-201ENST00000611461 208 ntBASIC1.96□□□□□ -2.1
LINC00477Q96M19 AC091304.9-201ENST00000612091 226 ntBASIC1.96□□□□□ -2.1
LINC00477Q96M19 AC093783.1-201ENST00000612976 329 ntBASIC1.96□□□□□ -2.1
LINC00477Q96M19 AL442067.2-201ENST00000614033 363 ntBASIC1.96□□□□□ -2.1
LINC00477Q96M19 AC116165.2-201ENST00000616705 206 ntBASIC1.96□□□□□ -2.1
LINC00477Q96M19 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.96□□□□□ -2.1
LINC00477Q96M19 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
LINC00477Q96M19 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.96□□□□□ -2.1
LINC00477Q96M19 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.95□□□□□ -2.1
LINC00477Q96M19 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LINC00477Q96M19 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LINC00477Q96M19 GNG5P1-201ENST00000255500 204 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 AL139276.1-201ENST00000311910 1001 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
LINC00477Q96M19 MIR208A-201ENST00000362287 71 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 RNU5E-1-201ENST00000362477 120 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 RNA5SP387-201ENST00000364226 106 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 RN7SKP226-201ENST00000364912 300 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LINC00477Q96M19 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.95□□□□□ -2.1
LINC00477Q96M19 DEFA7P-201ENST00000382676 285 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 RNU6-432P-201ENST00000384196 109 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 RNU6-14P-201ENST00000384630 106 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 AL109755.1-201ENST00000401791 649 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 RN7SKP140-201ENST00000411196 284 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.95□□□□□ -2.1
LINC00477Q96M19 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.95□□□□□ -2.1
LINC00477Q96M19 RPLP0P7-201ENST00000416050 667 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 CCDC58P2-201ENST00000417131 366 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 USP9YP20-201ENST00000419224 558 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 AC090960.1-201ENST00000421072 306 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 MTCO3P30-201ENST00000426425 670 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 AC008850.1-201ENST00000427546 362 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.95□□□□□ -2.1
LINC00477Q96M19 AC244035.1-201ENST00000430042 390 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.95□□□□□ -2.1
LINC00477Q96M19 FCF1P1-201ENST00000432690 571 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC1.95□□□□□ -2.1
LINC00477Q96M19 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms