Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.51□□□□□ -1.85
HMGB4Q8WW32 SEPT14P4-201ENST00000513445 186 ntBASIC3.51□□□□□ -1.85
HMGB4Q8WW32 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.51□□□□□ -1.85
HMGB4Q8WW32 RNA5SP291-201ENST00000517222 105 ntBASIC3.51□□□□□ -1.85
HMGB4Q8WW32 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.51□□□□□ -1.85
HMGB4Q8WW32 FO082796.1-201ENST00000523795 183 ntBASIC3.51□□□□□ -1.85
HMGB4Q8WW32 RANP3-201ENST00000530970 276 ntBASIC3.51□□□□□ -1.85
HMGB4Q8WW32 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.51□□□□□ -1.85
HMGB4Q8WW32 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.51□□□□□ -1.85
HMGB4Q8WW32 AC012493.2-201ENST00000595083 291 ntBASIC3.51□□□□□ -1.85
HMGB4Q8WW32 YPEL5P2-201ENST00000605553 359 ntBASIC3.51□□□□□ -1.85
HMGB4Q8WW32 AC008945.2-201ENST00000606056 604 ntBASIC3.51□□□□□ -1.85
HMGB4Q8WW32 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HMGB4Q8WW32 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.51□□□□□ -1.85
HMGB4Q8WW32 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HMGB4Q8WW32 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.5□□□□□ -1.85
HMGB4Q8WW32 AL049641.1-201ENST00000441055 1948 ntBASIC3.5□□□□□ -1.85
HMGB4Q8WW32 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.5□□□□□ -1.85
HMGB4Q8WW32 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HMGB4Q8WW32 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HMGB4Q8WW32 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
HMGB4Q8WW32 CUL1P1-201ENST00000509510 2425 ntBASIC3.5□□□□□ -1.85
HMGB4Q8WW32 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
HMGB4Q8WW32 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HMGB4Q8WW32 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
HMGB4Q8WW32 RNU6-1287P-201ENST00000362914 107 ntBASIC3.5□□□□□ -1.85
HMGB4Q8WW32 RNU6-1283P-201ENST00000365314 105 ntBASIC3.5□□□□□ -1.85
HMGB4Q8WW32 RNU6-1060P-201ENST00000384664 107 ntBASIC3.5□□□□□ -1.85
HMGB4Q8WW32 RNU6-550P-201ENST00000391057 101 ntBASIC3.5□□□□□ -1.85
HMGB4Q8WW32 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HMGB4Q8WW32 AC080125.1-201ENST00000414888 684 ntBASIC3.5□□□□□ -1.85
HMGB4Q8WW32 OR6C66P-201ENST00000414917 930 ntBASIC3.5□□□□□ -1.85
HMGB4Q8WW32 AC092047.1-201ENST00000424997 240 ntBASIC3.5□□□□□ -1.85
HMGB4Q8WW32 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.5□□□□□ -1.85
HMGB4Q8WW32 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.5□□□□□ -1.85
HMGB4Q8WW32 RPL23AP69-201ENST00000431134 458 ntBASIC3.5□□□□□ -1.85
HMGB4Q8WW32 RBMX2P4-201ENST00000441256 376 ntBASIC3.5□□□□□ -1.85
HMGB4Q8WW32 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.5□□□□□ -1.85
HMGB4Q8WW32 DPPA3P1-201ENST00000448050 469 ntBASIC3.5□□□□□ -1.85
HMGB4Q8WW32 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGB4Q8WW32 ANP32BP2-201ENST00000454525 545 ntBASIC3.5□□□□□ -1.85
HMGB4Q8WW32 RNA5SP310-201ENST00000459084 116 ntBASIC3.5□□□□□ -1.85
HMGB4Q8WW32 RPL37P6-201ENST00000460682 294 ntBASIC3.5□□□□□ -1.85
HMGB4Q8WW32 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.5□□□□□ -1.85
HMGB4Q8WW32 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGB4Q8WW32 RNA5SP401-201ENST00000515920 127 ntBASIC3.5□□□□□ -1.85
HMGB4Q8WW32 RNU6-1282P-201ENST00000516735 96 ntBASIC3.5□□□□□ -1.85
HMGB4Q8WW32 RNU6-914P-201ENST00000516749 109 ntBASIC3.5□□□□□ -1.85
HMGB4Q8WW32 IGKV2-26-201ENST00000518305 343 ntBASIC3.5□□□□□ -1.85
HMGB4Q8WW32 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGB4Q8WW32 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.5□□□□□ -1.85
HMGB4Q8WW32 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.5□□□□□ -1.85
HMGB4Q8WW32 AP000907.4-201ENST00000604143 237 ntBASIC3.5□□□□□ -1.85
HMGB4Q8WW32 AL390240.1-201ENST00000612950 384 ntBASIC3.5□□□□□ -1.85
HMGB4Q8WW32 AC010338.1-201ENST00000621823 717 ntBASIC3.5□□□□□ -1.85
HMGB4Q8WW32 AC024940.5-201ENST00000622889 474 ntBASIC3.5□□□□□ -1.85
HMGB4Q8WW32 AC027309.3-201ENST00000623419 351 ntBASIC3.5□□□□□ -1.85
HMGB4Q8WW32 AL732372.2-225ENST00000642124 456 ntBASIC3.5□□□□□ -1.85
HMGB4Q8WW32 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
HMGB4Q8WW32 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.5□□□□□ -1.85
HMGB4Q8WW32 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
HMGB4Q8WW32 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
HMGB4Q8WW32 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
HMGB4Q8WW32 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HMGB4Q8WW32 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HMGB4Q8WW32 HSPA8P1-201ENST00000425843 1833 ntBASIC3.49□□□□□ -1.85
HMGB4Q8WW32 AL365361.1-201ENST00000566942 3481 ntBASIC3.49□□□□□ -1.85
HMGB4Q8WW32 RPL7P26-201ENST00000333817 754 ntBASIC3.49□□□□□ -1.85
HMGB4Q8WW32 RNY3P3-201ENST00000363816 102 ntBASIC3.49□□□□□ -1.85
HMGB4Q8WW32 Y_RNA.245-201ENST00000364493 95 ntBASIC3.49□□□□□ -1.85
HMGB4Q8WW32 Y_RNA.295-201ENST00000364918 102 ntBASIC3.49□□□□□ -1.85
HMGB4Q8WW32 AL354719.1-201ENST00000406535 843 ntBASIC3.49□□□□□ -1.85
HMGB4Q8WW32 TMEM167AP1-201ENST00000423409 219 ntBASIC3.49□□□□□ -1.85
HMGB4Q8WW32 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.49□□□□□ -1.85
HMGB4Q8WW32 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.49□□□□□ -1.85
HMGB4Q8WW32 MTND1P2-201ENST00000430604 821 ntBASIC3.49□□□□□ -1.85
HMGB4Q8WW32 RPL7P28-201ENST00000437739 740 ntBASIC3.49□□□□□ -1.85
HMGB4Q8WW32 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.49□□□□□ -1.85
HMGB4Q8WW32 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.49□□□□□ -1.85
HMGB4Q8WW32 FABP5P15-201ENST00000453566 214 ntBASIC3.49□□□□□ -1.85
HMGB4Q8WW32 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.49□□□□□ -1.85
HMGB4Q8WW32 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.49□□□□□ -1.85
HMGB4Q8WW32 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.49□□□□□ -1.85
HMGB4Q8WW32 SNORA70.14-201ENST00000516205 110 ntBASIC3.49□□□□□ -1.85
HMGB4Q8WW32 RNU1-103P-201ENST00000516502 125 ntBASIC3.49□□□□□ -1.85
HMGB4Q8WW32 RNU6-1178P-201ENST00000516674 107 ntBASIC3.49□□□□□ -1.85
HMGB4Q8WW32 RNA5SP290-201ENST00000517133 127 ntBASIC3.49□□□□□ -1.85
HMGB4Q8WW32 HIF1AP1-201ENST00000553642 175 ntBASIC3.49□□□□□ -1.85
HMGB4Q8WW32 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.49□□□□□ -1.85
HMGB4Q8WW32 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.49□□□□□ -1.85
HMGB4Q8WW32 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.49□□□□□ -1.85
HMGB4Q8WW32 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.49□□□□□ -1.85
HMGB4Q8WW32 BNIP3P9-201ENST00000603714 553 ntBASIC3.49□□□□□ -1.85
HMGB4Q8WW32 AC136601.2-201ENST00000604356 474 ntBASIC3.49□□□□□ -1.85
HMGB4Q8WW32 MIR15A-201ENST00000607334 83 ntBASIC3.49□□□□□ -1.85
HMGB4Q8WW32 AC002553.4-201ENST00000616896 331 ntBASIC3.49□□□□□ -1.85
HMGB4Q8WW32 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.49□□□□□ -1.85
HMGB4Q8WW32 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.49□□□□□ -1.85
HMGB4Q8WW32 AL354685.2-201ENST00000448218 1447 ntBASIC3.49□□□□□ -1.85
HMGB4Q8WW32 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms