Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.92□□□□□ -2.1
SHROOM3Q8TF72 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.91□□□□□ -2.1
SHROOM3Q8TF72 RNU6-777P-201ENST00000364265 104 ntBASIC1.91□□□□□ -2.1
SHROOM3Q8TF72 RNU6-837P-201ENST00000391056 108 ntBASIC1.91□□□□□ -2.1
SHROOM3Q8TF72 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.91□□□□□ -2.1
SHROOM3Q8TF72 MIR320C1-201ENST00000408566 88 ntBASIC1.91□□□□□ -2.1
SHROOM3Q8TF72 RNU4-78P-201ENST00000410940 126 ntBASIC1.91□□□□□ -2.1
SHROOM3Q8TF72 BEND7P1-201ENST00000422058 457 ntBASIC1.91□□□□□ -2.1
SHROOM3Q8TF72 AC018630.2-202ENST00000422992 927 ntBASIC1.91□□□□□ -2.1
SHROOM3Q8TF72 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SHROOM3Q8TF72 HMGN2P21-201ENST00000447764 270 ntBASIC1.91□□□□□ -2.1
SHROOM3Q8TF72 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.91□□□□□ -2.1
SHROOM3Q8TF72 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SHROOM3Q8TF72 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.91□□□□□ -2.1
SHROOM3Q8TF72 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.91□□□□□ -2.1
SHROOM3Q8TF72 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.91□□□□□ -2.1
SHROOM3Q8TF72 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.91□□□□□ -2.1
SHROOM3Q8TF72 HSPE1P20-201ENST00000538133 289 ntBASIC1.91□□□□□ -2.1
SHROOM3Q8TF72 ARL2BPP2-201ENST00000550907 489 ntBASIC1.91□□□□□ -2.1
SHROOM3Q8TF72 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.91□□□□□ -2.1
SHROOM3Q8TF72 MED28P6-201ENST00000558776 231 ntBASIC1.91□□□□□ -2.1
SHROOM3Q8TF72 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.91□□□□□ -2.1
SHROOM3Q8TF72 AC090616.5-202ENST00000582111 297 ntBASIC1.91□□□□□ -2.1
SHROOM3Q8TF72 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.91□□□□□ -2.1
SHROOM3Q8TF72 VN1R82P-201ENST00000601481 356 ntBASIC1.91□□□□□ -2.1
SHROOM3Q8TF72 AC004987.4-201ENST00000603383 338 ntBASIC1.91□□□□□ -2.1
SHROOM3Q8TF72 AC080013.3-201ENST00000606839 578 ntBASIC1.91□□□□□ -2.1
SHROOM3Q8TF72 AC072039.2-201ENST00000608883 439 ntBASIC1.91□□□□□ -2.1
SHROOM3Q8TF72 AL356585.4-201ENST00000623078 1229 ntBASIC1.91□□□□□ -2.1
SHROOM3Q8TF72 AP000770.2-201ENST00000623694 100 ntBASIC1.91□□□□□ -2.1
SHROOM3Q8TF72 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
SHROOM3Q8TF72 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SHROOM3Q8TF72 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.91□□□□□ -2.1
SHROOM3Q8TF72 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
SHROOM3Q8TF72 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
SHROOM3Q8TF72 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
SHROOM3Q8TF72 Y_RNA.18-201ENST00000362461 102 ntBASIC1.9□□□□□ -2.1
SHROOM3Q8TF72 RNU6-343P-201ENST00000364709 104 ntBASIC1.9□□□□□ -2.1
SHROOM3Q8TF72 DHFRP6-201ENST00000401776 268 ntBASIC1.9□□□□□ -2.1
SHROOM3Q8TF72 AL136372.1-201ENST00000403060 228 ntBASIC1.9□□□□□ -2.1
SHROOM3Q8TF72 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC1.9□□□□□ -2.1
SHROOM3Q8TF72 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.9□□□□□ -2.1
SHROOM3Q8TF72 AC007742.1-201ENST00000425789 329 ntBASIC1.9□□□□□ -2.1
SHROOM3Q8TF72 AC027124.2-201ENST00000428249 105 ntBASIC1.9□□□□□ -2.1
SHROOM3Q8TF72 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.9□□□□□ -2.1
SHROOM3Q8TF72 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.9□□□□□ -2.1
SHROOM3Q8TF72 AC024082.2-201ENST00000434771 238 ntBASIC1.9□□□□□ -2.1
SHROOM3Q8TF72 ELOCP26-201ENST00000436067 329 ntBASIC1.9□□□□□ -2.1
SHROOM3Q8TF72 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.9□□□□□ -2.1
SHROOM3Q8TF72 SDCBPP1-201ENST00000440192 890 ntBASIC1.9□□□□□ -2.1
SHROOM3Q8TF72 AL031659.1-201ENST00000447075 539 ntBASIC1.9□□□□□ -2.1
SHROOM3Q8TF72 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.9□□□□□ -2.1
SHROOM3Q8TF72 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.9□□□□□ -2.1
SHROOM3Q8TF72 AL163540.1-201ENST00000485382 386 ntBASIC1.9□□□□□ -2.1
SHROOM3Q8TF72 AC090255.1-201ENST00000495779 349 ntBASIC1.9□□□□□ -2.1
SHROOM3Q8TF72 AC147055.4-201ENST00000504399 745 ntBASIC1.9□□□□□ -2.1
SHROOM3Q8TF72 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.9□□□□□ -2.1
SHROOM3Q8TF72 AC093677.1-201ENST00000514414 678 ntBASIC1.9□□□□□ -2.1
SHROOM3Q8TF72 SNORA31.20-201ENST00000517111 133 ntBASIC1.9□□□□□ -2.1
SHROOM3Q8TF72 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.9□□□□□ -2.1
SHROOM3Q8TF72 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
SHROOM3Q8TF72 AC023050.2-201ENST00000544968 387 ntBASIC1.9□□□□□ -2.1
SHROOM3Q8TF72 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.9□□□□□ -2.1
SHROOM3Q8TF72 MIR4419B-201ENST00000577260 68 ntBASIC1.9□□□□□ -2.1
SHROOM3Q8TF72 SNORD84-203ENST00000584275 78 ntBASIC1.9□□□□□ -2.1
SHROOM3Q8TF72 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.9□□□□□ -2.1
SHROOM3Q8TF72 AL357094.1-201ENST00000603845 844 ntBASIC1.9□□□□□ -2.1
SHROOM3Q8TF72 AL031281.1-201ENST00000604049 488 ntBASIC1.9□□□□□ -2.1
SHROOM3Q8TF72 AC012360.2-201ENST00000609349 391 ntBASIC1.9□□□□□ -2.1
SHROOM3Q8TF72 AL445264.1-201ENST00000621719 171 ntBASIC1.9□□□□□ -2.1
SHROOM3Q8TF72 AC091925.2-201ENST00000625059 256 ntBASIC1.9□□□□□ -2.1
SHROOM3Q8TF72 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.9□□□□□ -2.11
SHROOM3Q8TF72 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SHROOM3Q8TF72 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SHROOM3Q8TF72 SNORD114-26-201ENST00000363543 72 ntBASIC1.9□□□□□ -2.11
SHROOM3Q8TF72 RNY3P9-201ENST00000384727 106 ntBASIC1.9□□□□□ -2.11
SHROOM3Q8TF72 AC016769.3-201ENST00000396562 315 ntBASIC1.9□□□□□ -2.11
SHROOM3Q8TF72 AF228730.1-201ENST00000397972 663 ntBASIC1.9□□□□□ -2.11
SHROOM3Q8TF72 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SHROOM3Q8TF72 AL049545.1-201ENST00000401856 572 ntBASIC1.9□□□□□ -2.11
SHROOM3Q8TF72 AL138880.1-201ENST00000405824 642 ntBASIC1.9□□□□□ -2.11
SHROOM3Q8TF72 RNU2-20P-201ENST00000410425 191 ntBASIC1.9□□□□□ -2.11
SHROOM3Q8TF72 USP9YP33-201ENST00000412220 421 ntBASIC1.9□□□□□ -2.11
SHROOM3Q8TF72 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.9□□□□□ -2.11
SHROOM3Q8TF72 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC1.9□□□□□ -2.11
SHROOM3Q8TF72 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.9□□□□□ -2.11
SHROOM3Q8TF72 MTND4LP10-201ENST00000435146 291 ntBASIC1.9□□□□□ -2.11
SHROOM3Q8TF72 USP9YP35-201ENST00000435696 412 ntBASIC1.9□□□□□ -2.11
SHROOM3Q8TF72 UBE2FP3-201ENST00000436366 524 ntBASIC1.9□□□□□ -2.11
SHROOM3Q8TF72 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SHROOM3Q8TF72 DNAJC19P4-201ENST00000440115 345 ntBASIC1.9□□□□□ -2.11
SHROOM3Q8TF72 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.9□□□□□ -2.11
SHROOM3Q8TF72 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.9□□□□□ -2.11
SHROOM3Q8TF72 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC1.9□□□□□ -2.11
SHROOM3Q8TF72 AC234775.1-201ENST00000454247 670 ntBASIC1.9□□□□□ -2.11
SHROOM3Q8TF72 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.9□□□□□ -2.11
SHROOM3Q8TF72 RNU6-759P-201ENST00000516740 103 ntBASIC1.9□□□□□ -2.11
SHROOM3Q8TF72 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.9□□□□□ -2.11
SHROOM3Q8TF72 AC068587.4-201ENST00000533893 186 ntBASIC1.9□□□□□ -2.11
SHROOM3Q8TF72 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms