Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SH3RF3Q8TEJ3 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SH3RF3Q8TEJ3 PRO1804-201ENST00000623780 2050 ntBASIC4.33□□□□□ -1.72
SH3RF3Q8TEJ3 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.33□□□□□ -1.72
SH3RF3Q8TEJ3 BDP1P-201ENST00000582658 1990 ntBASIC4.33□□□□□ -1.72
SH3RF3Q8TEJ3 AL049641.1-201ENST00000441055 1948 ntBASIC4.33□□□□□ -1.72
SH3RF3Q8TEJ3 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 RNU6-552P-201ENST00000362869 119 ntBASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 RNU6-238P-201ENST00000363313 106 ntBASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 Y_RNA.252-201ENST00000364556 101 ntBASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 Y_RNA.364-201ENST00000365532 101 ntBASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 Y_RNA.463-201ENST00000384271 102 ntBASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 RNY1P14-201ENST00000384426 108 ntBASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 Y_RNA.556-201ENST00000384677 113 ntBASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 MIR34B-201ENST00000385076 84 ntBASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 RNU2-36P-201ENST00000410361 191 ntBASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 RPS15AP12-201ENST00000419498 388 ntBASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 AC093151.1-201ENST00000427711 313 ntBASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 AC010881.1-201ENST00000433830 235 ntBASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 RNU7-180P-201ENST00000459240 63 ntBASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 AC128713.1-201ENST00000471495 306 ntBASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 AP001025.2-201ENST00000490908 477 ntBASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 TRBVA-201ENST00000498804 316 ntBASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 AC025445.1-201ENST00000502728 300 ntBASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 AC074250.1-201ENST00000511117 192 ntBASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 FTH1P9-201ENST00000513251 355 ntBASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 RNU6-1038P-201ENST00000516516 104 ntBASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 RNA5SP454-201ENST00000517231 127 ntBASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 MIR4790-201ENST00000577799 79 ntBASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 AC105224.1-201ENST00000587055 421 ntBASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 GLUD1P4-201ENST00000590914 418 ntBASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 AC104695.3-201ENST00000604052 296 ntBASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 BRDTP1-201ENST00000605735 677 ntBASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 AL121992.2-201ENST00000606262 256 ntBASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 AC130324.3-201ENST00000614165 542 ntBASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 AC137590.2-201ENST00000619709 240 ntBASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SH3RF3Q8TEJ3 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 Y_RNA.378-201ENST00000365652 113 ntBASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 Y_RNA.455-201ENST00000384230 98 ntBASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 RNU6-39P-201ENST00000384344 107 ntBASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 Y_RNA.496-201ENST00000384444 101 ntBASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 RNVU1-14-201ENST00000384770 164 ntBASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 RN7SKP177-201ENST00000410567 355 ntBASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 AC080125.1-201ENST00000414888 684 ntBASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 OR4K11P-201ENST00000431829 904 ntBASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 AF228730.2-201ENST00000438784 848 ntBASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 RPL23AP33-201ENST00000442301 452 ntBASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 AC020550.1-201ENST00000447385 163 ntBASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 AC010655.1-201ENST00000449336 292 ntBASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 CYCSP35-201ENST00000451978 304 ntBASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 RPL23AP11-201ENST00000475260 469 ntBASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 AC090453.1-201ENST00000495560 436 ntBASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 RNU6-1143P-201ENST00000516125 104 ntBASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 AC107016.1-201ENST00000550463 337 ntBASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 OR4K8P-201ENST00000578842 1048 ntBASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 MIR3146-201ENST00000580367 79 ntBASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 MIR3672-201ENST00000584290 82 ntBASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 BBIP1P1-201ENST00000602999 279 ntBASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 AC018462.2-201ENST00000605375 395 ntBASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.31□□□□□ -1.72
SH3RF3Q8TEJ3 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms