Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 MTND5P19-201ENST00000424872 1794 ntBASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 TNPO1P3-201ENST00000436471 2662 ntBASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 AC010680.1-201ENST00000590024 3590 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 U3.3-201ENST00000362986 216 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 Y_RNA.138-201ENST00000363462 102 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 RNU6-596P-201ENST00000365395 98 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 RNU6-198P-201ENST00000384258 104 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 RNU1-44P-201ENST00000384453 163 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 AL590004.1-201ENST00000405321 300 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 RNA5SP178-201ENST00000410380 128 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 RNU6-1077P-201ENST00000410506 102 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 RAB9AP3-201ENST00000412737 573 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 AC093155.2-201ENST00000420734 937 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 AL355433.1-201ENST00000422804 300 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 AL133173.1-201ENST00000423458 397 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 AC017083.1-201ENST00000428093 483 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 AL358472.1-201ENST00000431295 329 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 AC087650.1-201ENST00000431445 468 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 BX323845.1-201ENST00000432417 179 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 MTCYBP6-201ENST00000441810 138 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 RAB9AP1-201ENST00000449393 573 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 AC008571.1-201ENST00000467232 300 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 RPL23AP14-201ENST00000468281 468 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 RPS21P4-201ENST00000487122 248 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 RPS29P20-201ENST00000489592 171 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 SSX6-203ENST00000509958 336 ntTSL 3 BASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 SNORA31.1-201ENST00000515993 133 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 SNORD46.2-201ENST00000516021 102 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 SNORA31.5-201ENST00000516190 133 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 SNORA43.2-201ENST00000516652 128 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 RNU6-1213P-201ENST00000517075 94 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 RNA5SP373-201ENST00000517271 95 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 OR8R1P-201ENST00000543943 764 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 AC103996.1-201ENST00000555468 102 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 AC109446.1-201ENST00000566172 220 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 AC010547.6-201ENST00000571789 193 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 SNORA74C-1-201ENST00000580726 201 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 RPSAP73-201ENST00000614820 330 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 AC127024.6-201ENST00000621598 424 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 AL158163.1-201ENST00000603915 1649 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 MTCO1P12-201ENST00000414273 1543 ntBASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.69□□□□□ -1.82
CLRN3Q8NCR9 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 MTND4P27-201ENST00000450813 1354 ntBASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 Y_RNA.2-201ENST00000362330 96 ntBASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 Y_RNA.197-201ENST00000364004 102 ntBASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 RNU6-1317P-201ENST00000364582 104 ntBASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 SNORA75.6-201ENST00000391318 127 ntBASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 MIR548P-201ENST00000408336 84 ntBASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 RPL31P12-201ENST00000422587 358 ntBASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 RPS11P7-201ENST00000442125 465 ntBASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 NIPA2P5-201ENST00000452282 464 ntBASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 RNU7-23P-201ENST00000459465 62 ntBASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 Y_RNA.631-201ENST00000459607 101 ntBASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 AC133134.1-201ENST00000466800 359 ntBASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 RPL7P42-201ENST00000481005 679 ntBASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 RPL23AP49-201ENST00000492925 468 ntBASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 AC021739.1-201ENST00000559631 174 ntBASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 MIR4474-201ENST00000579189 78 ntBASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 MIR4505-201ENST00000582238 73 ntBASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 AC091178.1-203ENST00000584586 279 ntBASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 AL354984.3-201ENST00000604803 325 ntBASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 AC005046.1-201ENST00000608515 625 ntBASIC3.68□□□□□ -1.82
CLRN3Q8NCR9 FP236240.3-201ENST00000623061 327 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms