Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 RNU1-40P-201ENST00000516816 164 ntBASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 RNU1-97P-201ENST00000516872 164 ntBASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 AC021451.1-201ENST00000523498 1129 ntBASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 VN1R83P-201ENST00000595685 445 ntBASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 AC009314.1-201ENST00000603871 304 ntBASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 APOOP1-201ENST00000604695 592 ntBASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 SNORD14A-201ENST00000606526 91 ntBASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 AC024060.1-201ENST00000607052 494 ntBASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 AC104763.3-201ENST00000613765 618 ntBASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 AC104985.3-201ENST00000623479 597 ntBASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
ZIC4Q8N9L1 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 RNU6-744P-201ENST00000365557 107 ntBASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 RNU6-1316P-201ENST00000384242 108 ntBASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 RNA5SP338-201ENST00000410495 85 ntBASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 RPL17P12-201ENST00000413391 526 ntBASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 BTF3L4P3-201ENST00000418879 476 ntBASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 ELOCP14-201ENST00000428070 331 ntBASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 GTF2IP3-201ENST00000433887 494 ntBASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 ELOCP7-201ENST00000439968 331 ntBASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 RPL37P6-201ENST00000460682 294 ntBASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 AC080013.2-201ENST00000460866 323 ntBASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 TRBV1-201ENST00000476502 284 ntBASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 MTAPP1-201ENST00000489154 819 ntBASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 RPS15AP36-201ENST00000492022 382 ntBASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 AC092436.1-201ENST00000506450 503 ntBASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 SNORA31.6-201ENST00000516241 130 ntBASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 SNORD19.2-201ENST00000516978 73 ntBASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 AC027807.1-201ENST00000559921 996 ntBASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 AC008121.1-201ENST00000603244 268 ntBASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 AC087241.4-201ENST00000612441 480 ntBASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 AC123767.1-202ENST00000620407 817 ntBASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
ZIC4Q8N9L1 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 DDX43P2-201ENST00000604753 1354 ntBASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 SNORA3A-201ENST00000364113 130 ntBASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 RNA5SP138-201ENST00000365098 114 ntBASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 U3.40-201ENST00000408706 208 ntBASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 AL953862.1-201ENST00000423016 168 ntBASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 EIF4EP4-201ENST00000424916 578 ntBASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 PAXBP1P1-201ENST00000449315 447 ntBASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 MEMO1P3-201ENST00000459811 302 ntBASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 AC008481.1-201ENST00000463278 396 ntBASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 AC090515.1-201ENST00000465295 476 ntBASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 LTV1P1-201ENST00000510683 1237 ntBASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 AC112198.4-201ENST00000515450 351 ntBASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 MIR892C-201ENST00000516410 77 ntBASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 MIR514B-201ENST00000516774 80 ntBASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 MRPS36P5-201ENST00000551909 298 ntBASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 YWHAZP1-201ENST00000556286 722 ntBASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 RPS3AP23-202ENST00000574601 686 ntBASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 BNIP3P26-201ENST00000600827 554 ntBASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 AL450336.1-201ENST00000605180 586 ntBASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 AC090186.1-201ENST00000605991 572 ntBASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 AC069294.1-201ENST00000608397 350 ntBASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 AC025048.6-202ENST00000627667 438 ntBASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 U2.21-201ENST00000637295 81 ntBASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.74□□□□□ -2.13
ZIC4Q8N9L1 KPNA2P1-201ENST00000458289 1591 ntBASIC1.73□□□□□ -2.13
ZIC4Q8N9L1 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms