Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 AC006133.1-201ENST00000617106 264 ntBASIC3.09□□□□□ -1.91
CCDC89Q8N998 AC007318.2-201ENST00000620999 243 ntBASIC3.09□□□□□ -1.91
CCDC89Q8N998 AC079248.2-201ENST00000623779 326 ntBASIC3.09□□□□□ -1.91
CCDC89Q8N998 PISRT1-201ENST00000626175 531 ntBASIC3.09□□□□□ -1.91
CCDC89Q8N998 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC89Q8N998 LRRC77P-213ENST00000637727 880 ntBASIC3.09□□□□□ -1.91
CCDC89Q8N998 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC89Q8N998 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CCDC89Q8N998 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CCDC89Q8N998 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.09□□□□□ -1.92
CCDC89Q8N998 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC89Q8N998 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC89Q8N998 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC89Q8N998 MIR22-201ENST00000362190 85 ntBASIC3.08□□□□□ -1.92
CCDC89Q8N998 RNU6-1280P-201ENST00000365211 107 ntBASIC3.08□□□□□ -1.92
CCDC89Q8N998 SNORA4.3-201ENST00000365564 137 ntBASIC3.08□□□□□ -1.92
CCDC89Q8N998 OR51A5P-201ENST00000415429 942 ntBASIC3.08□□□□□ -1.92
CCDC89Q8N998 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC89Q8N998 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC89Q8N998 AC003071.1-201ENST00000451219 789 ntBASIC3.08□□□□□ -1.92
CCDC89Q8N998 AC092001.1-201ENST00000453012 261 ntBASIC3.08□□□□□ -1.92
CCDC89Q8N998 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC89Q8N998 RNU7-125P-201ENST00000458760 62 ntBASIC3.08□□□□□ -1.92
CCDC89Q8N998 RPS29P2-201ENST00000479278 136 ntBASIC3.08□□□□□ -1.92
CCDC89Q8N998 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC89Q8N998 HMGB1P41-201ENST00000520234 440 ntBASIC3.08□□□□□ -1.92
CCDC89Q8N998 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC89Q8N998 CYCSP39-201ENST00000565821 309 ntBASIC3.08□□□□□ -1.92
CCDC89Q8N998 ROCK1P1-201ENST00000573767 549 ntBASIC3.08□□□□□ -1.92
CCDC89Q8N998 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC89Q8N998 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC89Q8N998 BNIP3P33-201ENST00000598912 569 ntBASIC3.08□□□□□ -1.92
CCDC89Q8N998 AC112191.3-201ENST00000604371 277 ntBASIC3.08□□□□□ -1.92
CCDC89Q8N998 AC122133.1-201ENST00000613964 233 ntBASIC3.08□□□□□ -1.92
CCDC89Q8N998 AC010678.1-201ENST00000614118 713 ntBASIC3.08□□□□□ -1.92
CCDC89Q8N998 AL359854.1-201ENST00000614203 1594 ntBASIC3.08□□□□□ -1.92
CCDC89Q8N998 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC89Q8N998 CDC27P3-201ENST00000635418 1910 ntBASIC3.07□□□□□ -1.92
CCDC89Q8N998 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC89Q8N998 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CCDC89Q8N998 Y_RNA.560-201ENST00000384689 102 ntBASIC3.07□□□□□ -1.92
CCDC89Q8N998 MIR218-1-201ENST00000384999 110 ntBASIC3.07□□□□□ -1.92
CCDC89Q8N998 RNU2-8P-201ENST00000410727 190 ntBASIC3.07□□□□□ -1.92
CCDC89Q8N998 AC080125.1-201ENST00000414888 684 ntBASIC3.07□□□□□ -1.92
CCDC89Q8N998 AL139281.1-201ENST00000422120 335 ntBASIC3.07□□□□□ -1.92
CCDC89Q8N998 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC89Q8N998 AL356583.2-201ENST00000426536 280 ntBASIC3.07□□□□□ -1.92
CCDC89Q8N998 AC005326.1-201ENST00000429197 123 ntBASIC3.07□□□□□ -1.92
CCDC89Q8N998 RPL23AP30-201ENST00000432419 501 ntBASIC3.07□□□□□ -1.92
CCDC89Q8N998 UBE2D3P1-201ENST00000436669 444 ntBASIC3.07□□□□□ -1.92
CCDC89Q8N998 MTND1P30-201ENST00000441241 901 ntBASIC3.07□□□□□ -1.92
CCDC89Q8N998 UBE2D3P4-201ENST00000441973 436 ntBASIC3.07□□□□□ -1.92
CCDC89Q8N998 AC006445.1-201ENST00000491925 405 ntBASIC3.07□□□□□ -1.92
CCDC89Q8N998 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.07□□□□□ -1.92
CCDC89Q8N998 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC89Q8N998 Y_RNA.689-201ENST00000516589 107 ntBASIC3.07□□□□□ -1.92
CCDC89Q8N998 SNORA67.7-201ENST00000516664 135 ntBASIC3.07□□□□□ -1.92
CCDC89Q8N998 SNORA31.19-201ENST00000517079 126 ntBASIC3.07□□□□□ -1.92
CCDC89Q8N998 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC89Q8N998 MTATP6P24-201ENST00000576835 677 ntBASIC3.07□□□□□ -1.92
CCDC89Q8N998 AC024153.1-201ENST00000603103 365 ntBASIC3.07□□□□□ -1.92
CCDC89Q8N998 AL022161.1-201ENST00000604390 213 ntBASIC3.07□□□□□ -1.92
CCDC89Q8N998 MIR7975-201ENST00000619350 68 ntBASIC3.07□□□□□ -1.92
CCDC89Q8N998 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.07□□□□□ -1.92
CCDC89Q8N998 AC010338.1-201ENST00000621823 717 ntBASIC3.07□□□□□ -1.92
CCDC89Q8N998 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC89Q8N998 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC89Q8N998 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC89Q8N998 Y_RNA.33-201ENST00000362591 102 ntBASIC3.06□□□□□ -1.92
CCDC89Q8N998 SNORA38-201ENST00000363946 132 ntBASIC3.06□□□□□ -1.92
CCDC89Q8N998 Z98749.2-208ENST00000381646 500 ntBASIC3.06□□□□□ -1.92
CCDC89Q8N998 RNU6-748P-201ENST00000384648 107 ntBASIC3.06□□□□□ -1.92
CCDC89Q8N998 AL031577.2-201ENST00000404133 280 ntBASIC3.06□□□□□ -1.92
CCDC89Q8N998 SNORD88.1-201ENST00000408684 91 ntBASIC3.06□□□□□ -1.92
CCDC89Q8N998 RNU6-1025P-201ENST00000410629 104 ntBASIC3.06□□□□□ -1.92
CCDC89Q8N998 AL109913.1-201ENST00000421173 514 ntBASIC3.06□□□□□ -1.92
CCDC89Q8N998 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC89Q8N998 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
CCDC89Q8N998 BX276092.3-201ENST00000424182 230 ntBASIC3.06□□□□□ -1.92
CCDC89Q8N998 AL589872.1-201ENST00000426602 288 ntBASIC3.06□□□□□ -1.92
CCDC89Q8N998 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.06□□□□□ -1.92
CCDC89Q8N998 AC007560.1-201ENST00000426912 237 ntBASIC3.06□□□□□ -1.92
CCDC89Q8N998 Z98742.2-201ENST00000431564 187 ntBASIC3.06□□□□□ -1.92
CCDC89Q8N998 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC89Q8N998 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC89Q8N998 USP9YP15-201ENST00000442391 422 ntBASIC3.06□□□□□ -1.92
CCDC89Q8N998 SNORA84-201ENST00000459229 133 ntBASIC3.06□□□□□ -1.92
CCDC89Q8N998 AC080013.2-201ENST00000460866 323 ntBASIC3.06□□□□□ -1.92
CCDC89Q8N998 AC116655.1-201ENST00000508324 901 ntBASIC3.06□□□□□ -1.92
CCDC89Q8N998 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC89Q8N998 RNA5SP112-201ENST00000515937 99 ntBASIC3.06□□□□□ -1.92
CCDC89Q8N998 AP003467.2-201ENST00000520175 319 ntBASIC3.06□□□□□ -1.92
CCDC89Q8N998 AP003122.4-201ENST00000530980 758 ntBASIC3.06□□□□□ -1.92
CCDC89Q8N998 AC010186.2-204ENST00000537668 439 ntBASIC3.06□□□□□ -1.92
CCDC89Q8N998 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC89Q8N998 AL157871.3-201ENST00000557231 293 ntBASIC3.06□□□□□ -1.92
CCDC89Q8N998 AC106782.4-201ENST00000568264 210 ntBASIC3.06□□□□□ -1.92
CCDC89Q8N998 NRBF2P1-201ENST00000587407 859 ntBASIC3.06□□□□□ -1.92
CCDC89Q8N998 WISP1-OT1-201ENST00000602893 642 ntBASIC3.06□□□□□ -1.92
CCDC89Q8N998 AL353778.1-201ENST00000603149 408 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms