Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 AL356583.2-201ENST00000426536 280 ntBASIC2.36□□□□□ -2.03
SKA3Q8IX90 ARPC3P1-201ENST00000437218 533 ntBASIC2.36□□□□□ -2.03
SKA3Q8IX90 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.36□□□□□ -2.03
SKA3Q8IX90 UBE2D3P4-201ENST00000441973 436 ntBASIC2.36□□□□□ -2.03
SKA3Q8IX90 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.36□□□□□ -2.03
SKA3Q8IX90 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC2.36□□□□□ -2.03
SKA3Q8IX90 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.36□□□□□ -2.03
SKA3Q8IX90 RBM43P1-201ENST00000476891 1081 ntBASIC2.36□□□□□ -2.03
SKA3Q8IX90 AL160314.1-201ENST00000490836 438 ntBASIC2.36□□□□□ -2.03
SKA3Q8IX90 RPPH1-2P-201ENST00000516688 293 ntBASIC2.36□□□□□ -2.03
SKA3Q8IX90 RNA5SP471-201ENST00000516971 106 ntBASIC2.36□□□□□ -2.03
SKA3Q8IX90 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.36□□□□□ -2.03
SKA3Q8IX90 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SKA3Q8IX90 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.36□□□□□ -2.03
SKA3Q8IX90 GTF3AP2-201ENST00000557014 266 ntBASIC2.36□□□□□ -2.03
SKA3Q8IX90 AC136601.2-201ENST00000604356 474 ntBASIC2.36□□□□□ -2.03
SKA3Q8IX90 AC112191.3-201ENST00000604371 277 ntBASIC2.36□□□□□ -2.03
SKA3Q8IX90 AL359999.1-201ENST00000604513 294 ntBASIC2.36□□□□□ -2.03
SKA3Q8IX90 AL160281.1-201ENST00000605307 311 ntBASIC2.36□□□□□ -2.03
SKA3Q8IX90 AC012360.2-201ENST00000609349 391 ntBASIC2.36□□□□□ -2.03
SKA3Q8IX90 MIR7106-201ENST00000612419 65 ntBASIC2.36□□□□□ -2.03
SKA3Q8IX90 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.36□□□□□ -2.03
SKA3Q8IX90 AC011890.2-201ENST00000613393 294 ntBASIC2.36□□□□□ -2.03
SKA3Q8IX90 AL161629.2-201ENST00000615347 275 ntBASIC2.36□□□□□ -2.03
SKA3Q8IX90 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.36□□□□□ -2.03
SKA3Q8IX90 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.36□□□□□ -2.03
SKA3Q8IX90 AC097520.1-201ENST00000624435 385 ntBASIC2.36□□□□□ -2.03
SKA3Q8IX90 AC110079.1-202ENST00000635213 138 ntBASIC2.36□□□□□ -2.03
SKA3Q8IX90 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.36□□□□□ -2.03
SKA3Q8IX90 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.36□□□□□ -2.03
SKA3Q8IX90 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.36□□□□□ -2.03
SKA3Q8IX90 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SKA3Q8IX90 AC022336.2-201ENST00000568966 2538 ntBASIC2.35□□□□□ -2.03
SKA3Q8IX90 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SKA3Q8IX90 AL360182.1-201ENST00000397433 468 ntBASIC2.35□□□□□ -2.03
SKA3Q8IX90 FCF1P10-201ENST00000407590 479 ntBASIC2.35□□□□□ -2.03
SKA3Q8IX90 RNU2-36P-201ENST00000410361 191 ntBASIC2.35□□□□□ -2.03
SKA3Q8IX90 RNU2-62P-201ENST00000410868 191 ntBASIC2.35□□□□□ -2.03
SKA3Q8IX90 RNU2-25P-201ENST00000411041 191 ntBASIC2.35□□□□□ -2.03
SKA3Q8IX90 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SKA3Q8IX90 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.35□□□□□ -2.03
SKA3Q8IX90 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.35□□□□□ -2.03
SKA3Q8IX90 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.35□□□□□ -2.03
SKA3Q8IX90 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.35□□□□□ -2.03
SKA3Q8IX90 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.35□□□□□ -2.03
SKA3Q8IX90 MTATP6P17-201ENST00000431030 672 ntBASIC2.35□□□□□ -2.03
SKA3Q8IX90 MTND1P26-201ENST00000440488 538 ntBASIC2.35□□□□□ -2.03
SKA3Q8IX90 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.35□□□□□ -2.03
SKA3Q8IX90 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.35□□□□□ -2.03
SKA3Q8IX90 MTND1P12-201ENST00000455231 147 ntBASIC2.35□□□□□ -2.03
SKA3Q8IX90 RPL12P25-201ENST00000455592 494 ntBASIC2.35□□□□□ -2.03
SKA3Q8IX90 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.35□□□□□ -2.03
SKA3Q8IX90 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
SKA3Q8IX90 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.35□□□□□ -2.03
SKA3Q8IX90 MTND3P7-201ENST00000474435 343 ntBASIC2.35□□□□□ -2.03
SKA3Q8IX90 AC096576.1-201ENST00000489014 359 ntBASIC2.35□□□□□ -2.03
SKA3Q8IX90 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.35□□□□□ -2.03
SKA3Q8IX90 ARL2BPP2-201ENST00000550907 489 ntBASIC2.35□□□□□ -2.03
SKA3Q8IX90 AL391261.3-201ENST00000557194 520 ntBASIC2.35□□□□□ -2.03
SKA3Q8IX90 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.35□□□□□ -2.03
SKA3Q8IX90 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.35□□□□□ -2.03
SKA3Q8IX90 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.35□□□□□ -2.03
SKA3Q8IX90 RPL23AP78-201ENST00000599928 470 ntBASIC2.35□□□□□ -2.03
SKA3Q8IX90 AC010620.2-201ENST00000600135 313 ntBASIC2.35□□□□□ -2.03
SKA3Q8IX90 AC012065.4-201ENST00000602445 679 ntBASIC2.35□□□□□ -2.03
SKA3Q8IX90 AC098826.3-201ENST00000603823 466 ntBASIC2.35□□□□□ -2.03
SKA3Q8IX90 ATP1B3P1-201ENST00000605365 821 ntBASIC2.35□□□□□ -2.03
SKA3Q8IX90 AC007619.2-201ENST00000605743 379 ntBASIC2.35□□□□□ -2.03
SKA3Q8IX90 AC138749.5-201ENST00000611461 208 ntBASIC2.35□□□□□ -2.03
SKA3Q8IX90 AC116165.2-201ENST00000616705 206 ntBASIC2.35□□□□□ -2.03
SKA3Q8IX90 AC091931.1-201ENST00000623488 728 ntBASIC2.35□□□□□ -2.03
SKA3Q8IX90 CR381653.2-201ENST00000624041 768 ntBASIC2.35□□□□□ -2.03
SKA3Q8IX90 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.35□□□□□ -2.03
SKA3Q8IX90 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SKA3Q8IX90 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.35□□□□□ -2.03
SKA3Q8IX90 AC026241.1-201ENST00000517873 2142 ntBASIC2.35□□□□□ -2.03
SKA3Q8IX90 AC099654.7-201ENST00000635788 2127 ntBASIC2.35□□□□□ -2.03
SKA3Q8IX90 AL365361.1-201ENST00000566942 3481 ntBASIC2.34□□□□□ -2.03
SKA3Q8IX90 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
SKA3Q8IX90 AC010680.1-201ENST00000590024 3590 ntBASIC2.34□□□□□ -2.03
SKA3Q8IX90 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SKA3Q8IX90 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.34□□□□□ -2.03
SKA3Q8IX90 RNU6-1167P-201ENST00000363227 94 ntBASIC2.34□□□□□ -2.03
SKA3Q8IX90 Y_RNA.245-201ENST00000364493 95 ntBASIC2.34□□□□□ -2.03
SKA3Q8IX90 RNU6-701P-201ENST00000384059 107 ntBASIC2.34□□□□□ -2.03
SKA3Q8IX90 MIR9-1-201ENST00000385198 89 ntBASIC2.34□□□□□ -2.03
SKA3Q8IX90 MT-TH-201ENST00000387441 69 ntBASIC2.34□□□□□ -2.03
SKA3Q8IX90 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.34□□□□□ -2.03
SKA3Q8IX90 AL356057.3-201ENST00000402607 340 ntBASIC2.34□□□□□ -2.03
SKA3Q8IX90 AL139397.2-201ENST00000404529 772 ntBASIC2.34□□□□□ -2.03
SKA3Q8IX90 NDUFB4P4-201ENST00000404822 243 ntBASIC2.34□□□□□ -2.03
SKA3Q8IX90 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.34□□□□□ -2.03
SKA3Q8IX90 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.34□□□□□ -2.03
SKA3Q8IX90 AC006366.1-201ENST00000422002 759 ntBASIC2.34□□□□□ -2.03
SKA3Q8IX90 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.34□□□□□ -2.03
SKA3Q8IX90 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.34□□□□□ -2.03
SKA3Q8IX90 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.34□□□□□ -2.03
SKA3Q8IX90 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.34□□□□□ -2.03
SKA3Q8IX90 AC098826.2-201ENST00000452011 651 ntBASIC2.34□□□□□ -2.03
SKA3Q8IX90 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 225.6 ms