Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 AP000936.2-201ENST00000447151 681 ntBASIC3.38□□□□□ -1.87
ALFQ53S48 DPPA3P1-201ENST00000448050 469 ntBASIC3.38□□□□□ -1.87
ALFQ53S48 AC003071.1-201ENST00000451219 789 ntBASIC3.38□□□□□ -1.87
ALFQ53S48 BX510359.1-201ENST00000456973 237 ntBASIC3.38□□□□□ -1.87
ALFQ53S48 TRBV1-201ENST00000476502 284 ntBASIC3.38□□□□□ -1.87
ALFQ53S48 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.38□□□□□ -1.87
ALFQ53S48 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ALFQ53S48 AC022447.1-201ENST00000515358 464 ntBASIC3.38□□□□□ -1.87
ALFQ53S48 RNU6-123P-201ENST00000516163 102 ntBASIC3.38□□□□□ -1.87
ALFQ53S48 SNORD19.2-201ENST00000516978 73 ntBASIC3.38□□□□□ -1.87
ALFQ53S48 SNORA31.19-201ENST00000517079 126 ntBASIC3.38□□□□□ -1.87
ALFQ53S48 AC090572.1-201ENST00000519251 160 ntBASIC3.38□□□□□ -1.87
ALFQ53S48 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.38□□□□□ -1.87
ALFQ53S48 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.38□□□□□ -1.87
ALFQ53S48 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ALFQ53S48 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
ALFQ53S48 AC006199.1-201ENST00000548728 219 ntBASIC3.38□□□□□ -1.87
ALFQ53S48 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.38□□□□□ -1.87
ALFQ53S48 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.38□□□□□ -1.87
ALFQ53S48 AC103810.1-201ENST00000579873 453 ntBASIC3.38□□□□□ -1.87
ALFQ53S48 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.38□□□□□ -1.87
ALFQ53S48 AC096577.2-201ENST00000611455 153 ntBASIC3.38□□□□□ -1.87
ALFQ53S48 uc_338.1-201ENST00000612113 180 ntBASIC3.38□□□□□ -1.87
ALFQ53S48 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
ALFQ53S48 AC024940.5-201ENST00000622889 474 ntBASIC3.38□□□□□ -1.87
ALFQ53S48 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.38□□□□□ -1.87
ALFQ53S48 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
ALFQ53S48 MTND5P1-201ENST00000445440 1375 ntBASIC3.38□□□□□ -1.87
ALFQ53S48 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
ALFQ53S48 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ALFQ53S48 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
ALFQ53S48 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.37□□□□□ -1.87
ALFQ53S48 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.37□□□□□ -1.87
ALFQ53S48 MTND5P27-201ENST00000428871 1720 ntBASIC3.37□□□□□ -1.87
ALFQ53S48 AC103710.2-202ENST00000641454 2853 ntBASIC3.37□□□□□ -1.87
ALFQ53S48 RN7SKP226-201ENST00000364912 300 ntBASIC3.37□□□□□ -1.87
ALFQ53S48 RNU6-1180P-201ENST00000364935 107 ntBASIC3.37□□□□□ -1.87
ALFQ53S48 AP002088.1-201ENST00000382740 395 ntBASIC3.37□□□□□ -1.87
ALFQ53S48 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ALFQ53S48 RNU6-55P-201ENST00000411092 107 ntBASIC3.37□□□□□ -1.87
ALFQ53S48 RNU6-954P-201ENST00000411355 107 ntBASIC3.37□□□□□ -1.87
ALFQ53S48 BX295541.1-201ENST00000417774 250 ntBASIC3.37□□□□□ -1.87
ALFQ53S48 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC3.37□□□□□ -1.87
ALFQ53S48 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.37□□□□□ -1.87
ALFQ53S48 AL161651.1-201ENST00000440882 223 ntBASIC3.37□□□□□ -1.87
ALFQ53S48 AL078601.1-201ENST00000444542 271 ntBASIC3.37□□□□□ -1.87
ALFQ53S48 USP9YP29-201ENST00000445112 563 ntBASIC3.37□□□□□ -1.87
ALFQ53S48 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.37□□□□□ -1.87
ALFQ53S48 AC233279.1-201ENST00000455300 423 ntBASIC3.37□□□□□ -1.87
ALFQ53S48 AC126389.1-201ENST00000477436 290 ntBASIC3.37□□□□□ -1.87
ALFQ53S48 AC004924.1-201ENST00000480160 781 ntBASIC3.37□□□□□ -1.87
ALFQ53S48 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.37□□□□□ -1.87
ALFQ53S48 ARL2BPP4-201ENST00000506854 471 ntBASIC3.37□□□□□ -1.87
ALFQ53S48 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.37□□□□□ -1.87
ALFQ53S48 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.37□□□□□ -1.87
ALFQ53S48 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.37□□□□□ -1.87
ALFQ53S48 AL356057.1-201ENST00000533798 831 ntBASIC3.37□□□□□ -1.87
ALFQ53S48 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.37□□□□□ -1.87
ALFQ53S48 AL121821.2-201ENST00000556081 394 ntBASIC3.37□□□□□ -1.87
ALFQ53S48 AC037471.2-201ENST00000564941 598 ntBASIC3.37□□□□□ -1.87
ALFQ53S48 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
ALFQ53S48 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.37□□□□□ -1.87
ALFQ53S48 AC010620.1-201ENST00000601088 1102 ntBASIC3.37□□□□□ -1.87
ALFQ53S48 AL121992.2-201ENST00000606262 256 ntBASIC3.37□□□□□ -1.87
ALFQ53S48 AC025034.2-201ENST00000623264 286 ntBASIC3.37□□□□□ -1.87
ALFQ53S48 CU459211.1-201ENST00000635667 749 ntBASIC3.37□□□□□ -1.87
ALFQ53S48 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.37□□□□□ -1.87
ALFQ53S48 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ALFQ53S48 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ALFQ53S48 AC004944.1-201ENST00000517807 3059 ntBASIC3.36□□□□□ -1.87
ALFQ53S48 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ALFQ53S48 SNORD56.5-201ENST00000364281 72 ntBASIC3.36□□□□□ -1.87
ALFQ53S48 SNORA68.1-201ENST00000364537 132 ntBASIC3.36□□□□□ -1.87
ALFQ53S48 MIR627-201ENST00000384979 97 ntBASIC3.36□□□□□ -1.87
ALFQ53S48 CISD1P1-201ENST00000393907 327 ntBASIC3.36□□□□□ -1.87
ALFQ53S48 RNA5SP229-201ENST00000410809 99 ntBASIC3.36□□□□□ -1.87
ALFQ53S48 RNU6-387P-201ENST00000411331 105 ntBASIC3.36□□□□□ -1.87
ALFQ53S48 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
ALFQ53S48 NIPA2P5-201ENST00000452282 464 ntBASIC3.36□□□□□ -1.87
ALFQ53S48 RPL23AP70-201ENST00000483361 460 ntBASIC3.36□□□□□ -1.87
ALFQ53S48 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.36□□□□□ -1.87
ALFQ53S48 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.36□□□□□ -1.87
ALFQ53S48 AC117532.1-201ENST00000514638 323 ntBASIC3.36□□□□□ -1.87
ALFQ53S48 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.36□□□□□ -1.87
ALFQ53S48 COX6CP5-201ENST00000527162 228 ntBASIC3.36□□□□□ -1.87
ALFQ53S48 AP001646.1-201ENST00000527936 915 ntBASIC3.36□□□□□ -1.87
ALFQ53S48 RANP3-201ENST00000530970 276 ntBASIC3.36□□□□□ -1.87
ALFQ53S48 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.36□□□□□ -1.87
ALFQ53S48 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.36□□□□□ -1.87
ALFQ53S48 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.36□□□□□ -1.87
ALFQ53S48 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.36□□□□□ -1.87
ALFQ53S48 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.36□□□□□ -1.87
ALFQ53S48 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.36□□□□□ -1.87
ALFQ53S48 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.36□□□□□ -1.87
ALFQ53S48 AL157786.1-207ENST00000627771 695 ntBASIC3.36□□□□□ -1.87
ALFQ53S48 MIR7515-201ENST00000637837 67 ntBASIC3.36□□□□□ -1.87
ALFQ53S48 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
ALFQ53S48 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
ALFQ53S48 AC004520.1-201ENST00000608362 1413 ntBASIC3.36□□□□□ -1.87
ALFQ53S48 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms