Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC0.88□□□□□ -2.27
CACNA1EQ15878 MTCO3P46-201ENST00000425787 232 ntBASIC0.88□□□□□ -2.27
CACNA1EQ15878 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
CACNA1EQ15878 ZNF965P-201ENST00000432501 817 ntBASIC0.88□□□□□ -2.27
CACNA1EQ15878 AC004383.1-201ENST00000438135 289 ntBASIC0.88□□□□□ -2.27
CACNA1EQ15878 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC0.88□□□□□ -2.27
CACNA1EQ15878 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC0.88□□□□□ -2.27
CACNA1EQ15878 PABPC1P3-201ENST00000469174 459 ntBASIC0.88□□□□□ -2.27
CACNA1EQ15878 AC104806.1-201ENST00000508720 308 ntBASIC0.88□□□□□ -2.27
CACNA1EQ15878 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.88□□□□□ -2.27
CACNA1EQ15878 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC0.88□□□□□ -2.27
CACNA1EQ15878 DUXAP11-201ENST00000603858 526 ntBASIC0.88□□□□□ -2.27
CACNA1EQ15878 FAM71BP1-201ENST00000604431 523 ntBASIC0.88□□□□□ -2.27
CACNA1EQ15878 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC0.87□□□□□ -2.27
CACNA1EQ15878 Y_RNA.412-201ENST00000384001 104 ntBASIC0.87□□□□□ -2.27
CACNA1EQ15878 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.87□□□□□ -2.27
CACNA1EQ15878 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC0.87□□□□□ -2.27
CACNA1EQ15878 RPL36P19-201ENST00000430744 301 ntBASIC0.87□□□□□ -2.27
CACNA1EQ15878 AL392003.1-201ENST00000434394 243 ntBASIC0.87□□□□□ -2.27
CACNA1EQ15878 RPS15AP27-201ENST00000449183 343 ntBASIC0.87□□□□□ -2.27
CACNA1EQ15878 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC0.87□□□□□ -2.27
CACNA1EQ15878 AC055731.1-201ENST00000474387 401 ntBASIC0.87□□□□□ -2.27
CACNA1EQ15878 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC0.87□□□□□ -2.27
CACNA1EQ15878 AC020699.1-201ENST00000505161 445 ntBASIC0.87□□□□□ -2.27
CACNA1EQ15878 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC0.87□□□□□ -2.27
CACNA1EQ15878 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC0.87□□□□□ -2.27
CACNA1EQ15878 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC0.87□□□□□ -2.27
CACNA1EQ15878 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.87□□□□□ -2.27
CACNA1EQ15878 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC0.87□□□□□ -2.27
CACNA1EQ15878 AGGF1P5-201ENST00000567900 919 ntBASIC0.87□□□□□ -2.27
CACNA1EQ15878 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.87□□□□□ -2.27
CACNA1EQ15878 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.87□□□□□ -2.27
CACNA1EQ15878 MTND5P9-201ENST00000503854 1755 ntBASIC0.87□□□□□ -2.27
CACNA1EQ15878 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
CACNA1EQ15878 RNU6-670P-201ENST00000364312 104 ntBASIC0.87□□□□□ -2.27
CACNA1EQ15878 AP002784.2-201ENST00000397300 549 ntBASIC0.87□□□□□ -2.27
CACNA1EQ15878 AC099677.1-201ENST00000420575 175 ntBASIC0.87□□□□□ -2.27
CACNA1EQ15878 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC0.87□□□□□ -2.27
CACNA1EQ15878 AC015908.1-201ENST00000478739 476 ntBASIC0.87□□□□□ -2.27
CACNA1EQ15878 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.87□□□□□ -2.27
CACNA1EQ15878 AP004247.1-201ENST00000531556 1289 ntBASIC0.87□□□□□ -2.27
CACNA1EQ15878 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.87□□□□□ -2.27
CACNA1EQ15878 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC0.87□□□□□ -2.27
CACNA1EQ15878 AL627230.6-201ENST00000611129 280 ntBASIC0.87□□□□□ -2.27
CACNA1EQ15878 AC079395.3-201ENST00000615161 484 ntBASIC0.87□□□□□ -2.27
CACNA1EQ15878 AC004808.1-201ENST00000627671 721 ntBASIC0.87□□□□□ -2.27
CACNA1EQ15878 AC010889.1-201ENST00000566193 2666 ntBASIC0.86□□□□□ -2.27
CACNA1EQ15878 AC008555.8-201ENST00000623602 2168 ntBASIC0.86□□□□□ -2.27
CACNA1EQ15878 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC0.86□□□□□ -2.27
CACNA1EQ15878 VTRNA1-3-201ENST00000365645 89 ntBASIC0.86□□□□□ -2.27
CACNA1EQ15878 NDUFA5P10-201ENST00000432147 357 ntBASIC0.86□□□□□ -2.27
CACNA1EQ15878 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.86□□□□□ -2.27
CACNA1EQ15878 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC0.86□□□□□ -2.27
CACNA1EQ15878 AC010099.1-201ENST00000455434 375 ntBASIC0.86□□□□□ -2.27
CACNA1EQ15878 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC0.86□□□□□ -2.27
CACNA1EQ15878 MRPS36P2-201ENST00000512569 299 ntBASIC0.86□□□□□ -2.27
CACNA1EQ15878 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC0.86□□□□□ -2.27
CACNA1EQ15878 MTND2P26-201ENST00000528255 1029 ntBASIC0.86□□□□□ -2.27
CACNA1EQ15878 AC022880.1-201ENST00000534017 973 ntBASIC0.86□□□□□ -2.27
CACNA1EQ15878 AC092470.1-201ENST00000546187 132 ntBASIC0.86□□□□□ -2.27
CACNA1EQ15878 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC0.86□□□□□ -2.27
CACNA1EQ15878 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.86□□□□□ -2.27
CACNA1EQ15878 AL355812.1-201ENST00000603215 216 ntBASIC0.86□□□□□ -2.27
CACNA1EQ15878 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC0.86□□□□□ -2.27
CACNA1EQ15878 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.86□□□□□ -2.27
CACNA1EQ15878 MTND4P12-201ENST00000498999 1377 ntBASIC0.86□□□□□ -2.27
CACNA1EQ15878 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.86□□□□□ -2.27
CACNA1EQ15878 RNU6-263P-201ENST00000363811 107 ntBASIC0.86□□□□□ -2.27
CACNA1EQ15878 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.86□□□□□ -2.27
CACNA1EQ15878 LINC01347-201ENST00000417964 355 ntBASIC0.86□□□□□ -2.27
CACNA1EQ15878 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.86□□□□□ -2.27
CACNA1EQ15878 AC092648.1-201ENST00000425870 423 ntBASIC0.86□□□□□ -2.27
CACNA1EQ15878 MTATP6P7-201ENST00000453315 681 ntBASIC0.86□□□□□ -2.27
CACNA1EQ15878 GTF2IP12-201ENST00000456547 356 ntBASIC0.86□□□□□ -2.27
CACNA1EQ15878 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC0.86□□□□□ -2.27
CACNA1EQ15878 RNU1-98P-201ENST00000458992 160 ntBASIC0.86□□□□□ -2.27
CACNA1EQ15878 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.86□□□□□ -2.27
CACNA1EQ15878 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC0.86□□□□□ -2.27
CACNA1EQ15878 MRPS33P3-201ENST00000513456 322 ntBASIC0.86□□□□□ -2.27
CACNA1EQ15878 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC0.86□□□□□ -2.27
CACNA1EQ15878 CASP1P1-201ENST00000526345 212 ntBASIC0.86□□□□□ -2.27
CACNA1EQ15878 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.86□□□□□ -2.27
CACNA1EQ15878 AC090666.1-201ENST00000578241 445 ntBASIC0.86□□□□□ -2.27
CACNA1EQ15878 ZNF92P3-201ENST00000596594 954 ntBASIC0.86□□□□□ -2.27
CACNA1EQ15878 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.86□□□□□ -2.27
CACNA1EQ15878 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.86□□□□□ -2.27
CACNA1EQ15878 MIR338-201ENST00000636369 67 ntBASIC0.86□□□□□ -2.27
CACNA1EQ15878 RNU6-666P-201ENST00000363499 107 ntBASIC0.85□□□□□ -2.27
CACNA1EQ15878 SNORA68.1-201ENST00000364537 132 ntBASIC0.85□□□□□ -2.27
CACNA1EQ15878 AL512604.1-201ENST00000404812 257 ntBASIC0.85□□□□□ -2.27
CACNA1EQ15878 Z86062.1-201ENST00000406773 777 ntBASIC0.85□□□□□ -2.27
CACNA1EQ15878 AC092745.2-202ENST00000411880 369 ntBASIC0.85□□□□□ -2.27
CACNA1EQ15878 UBE2V1P9-201ENST00000414760 368 ntBASIC0.85□□□□□ -2.27
CACNA1EQ15878 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.85□□□□□ -2.27
CACNA1EQ15878 MTCO3P12-201ENST00000416718 547 ntBASIC0.85□□□□□ -2.27
CACNA1EQ15878 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC0.85□□□□□ -2.27
CACNA1EQ15878 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.85□□□□□ -2.27
CACNA1EQ15878 KLF3P2-201ENST00000465138 268 ntBASIC0.85□□□□□ -2.27
CACNA1EQ15878 AC111193.1-201ENST00000504097 155 ntBASIC0.85□□□□□ -2.27
CACNA1EQ15878 HMGB3P17-201ENST00000504195 649 ntBASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms