Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 AL078605.1-201ENST00000603529 500 ntBASIC0.59□□□□□ -2.31
TFF3Q07654 AC010487.4-201ENST00000637027 61 ntBASIC0.59□□□□□ -2.31
TFF3Q07654 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC0.58□□□□□ -2.32
TFF3Q07654 RNU6ATAC2P-201ENST00000387943 126 ntBASIC0.58□□□□□ -2.32
TFF3Q07654 RNU6-882P-201ENST00000391025 103 ntBASIC0.58□□□□□ -2.32
TFF3Q07654 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.58□□□□□ -2.32
TFF3Q07654 AC244636.1-201ENST00000421152 228 ntBASIC0.58□□□□□ -2.32
TFF3Q07654 TRIM60P3Y-201ENST00000432201 673 ntBASIC0.58□□□□□ -2.32
TFF3Q07654 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.58□□□□□ -2.32
TFF3Q07654 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC0.58□□□□□ -2.32
TFF3Q07654 AC117454.1-201ENST00000491120 168 ntBASIC0.58□□□□□ -2.32
TFF3Q07654 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC0.58□□□□□ -2.32
TFF3Q07654 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC0.58□□□□□ -2.32
TFF3Q07654 AC008945.2-201ENST00000606056 604 ntBASIC0.58□□□□□ -2.32
TFF3Q07654 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.58□□□□□ -2.32
TFF3Q07654 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
TFF3Q07654 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.57□□□□□ -2.32
TFF3Q07654 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.57□□□□□ -2.32
TFF3Q07654 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC0.57□□□□□ -2.32
TFF3Q07654 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
TFF3Q07654 RNA5SP347-201ENST00000362445 119 ntBASIC0.57□□□□□ -2.32
TFF3Q07654 RNA5SP457-201ENST00000363657 124 ntBASIC0.57□□□□□ -2.32
TFF3Q07654 NUP35P2-201ENST00000416748 943 ntBASIC0.57□□□□□ -2.32
TFF3Q07654 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC0.57□□□□□ -2.32
TFF3Q07654 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC0.57□□□□□ -2.32
TFF3Q07654 EIF4EP4-201ENST00000424916 578 ntBASIC0.57□□□□□ -2.32
TFF3Q07654 RPL7P34-201ENST00000433316 712 ntBASIC0.57□□□□□ -2.32
TFF3Q07654 AC015908.1-201ENST00000478739 476 ntBASIC0.57□□□□□ -2.32
TFF3Q07654 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC0.57□□□□□ -2.32
TFF3Q07654 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC0.57□□□□□ -2.32
TFF3Q07654 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC0.57□□□□□ -2.32
TFF3Q07654 AC104806.1-201ENST00000508720 308 ntBASIC0.57□□□□□ -2.32
TFF3Q07654 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC0.57□□□□□ -2.32
TFF3Q07654 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.57□□□□□ -2.32
TFF3Q07654 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC0.57□□□□□ -2.32
TFF3Q07654 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC0.57□□□□□ -2.32
TFF3Q07654 AC011472.4-201ENST00000615848 491 ntBASIC0.57□□□□□ -2.32
TFF3Q07654 LINC02211-204ENST00000642024 1070 ntBASIC0.57□□□□□ -2.32
TFF3Q07654 AL589743.1-201ENST00000551932 2712 ntBASIC0.57□□□□□ -2.32
TFF3Q07654 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
TFF3Q07654 RNU6-338P-201ENST00000383888 105 ntBASIC0.56□□□□□ -2.32
TFF3Q07654 RNU6-629P-201ENST00000384061 103 ntBASIC0.56□□□□□ -2.32
TFF3Q07654 RNU6-16P-201ENST00000384385 107 ntBASIC0.56□□□□□ -2.32
TFF3Q07654 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
TFF3Q07654 RPS3AP24-201ENST00000407896 734 ntBASIC0.56□□□□□ -2.32
TFF3Q07654 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC0.56□□□□□ -2.32
TFF3Q07654 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC0.56□□□□□ -2.32
TFF3Q07654 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.56□□□□□ -2.32
TFF3Q07654 AP003497.1-201ENST00000528472 562 ntBASIC0.56□□□□□ -2.32
TFF3Q07654 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.56□□□□□ -2.32
TFF3Q07654 AC008127.2-201ENST00000549925 1075 ntBASIC0.56□□□□□ -2.32
TFF3Q07654 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.56□□□□□ -2.32
TFF3Q07654 AP005137.2-201ENST00000609238 400 ntBASIC0.56□□□□□ -2.32
TFF3Q07654 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
TFF3Q07654 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
TFF3Q07654 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.56□□□□□ -2.32
TFF3Q07654 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.55□□□□□ -2.32
TFF3Q07654 MTND5P9-201ENST00000503854 1755 ntBASIC0.55□□□□□ -2.32
TFF3Q07654 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
TFF3Q07654 Y_RNA.30-201ENST00000362572 97 ntBASIC0.55□□□□□ -2.32
TFF3Q07654 RNA5SP499-201ENST00000363982 119 ntBASIC0.55□□□□□ -2.32
TFF3Q07654 Y_RNA.258-201ENST00000364613 105 ntBASIC0.55□□□□□ -2.32
TFF3Q07654 SNORA70.7-201ENST00000384159 133 ntBASIC0.55□□□□□ -2.32
TFF3Q07654 U3.20-201ENST00000390909 217 ntBASIC0.55□□□□□ -2.32
TFF3Q07654 RNA5SP105-201ENST00000391123 113 ntBASIC0.55□□□□□ -2.32
TFF3Q07654 AL139397.2-201ENST00000404529 772 ntBASIC0.55□□□□□ -2.32
TFF3Q07654 AL589655.1-201ENST00000405398 482 ntBASIC0.55□□□□□ -2.32
TFF3Q07654 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC0.55□□□□□ -2.32
TFF3Q07654 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC0.55□□□□□ -2.32
TFF3Q07654 AL365496.1-201ENST00000426885 215 ntBASIC0.55□□□□□ -2.32
TFF3Q07654 AC245047.4-201ENST00000433189 144 ntBASIC0.55□□□□□ -2.32
TFF3Q07654 AC092628.1-201ENST00000436250 252 ntBASIC0.55□□□□□ -2.32
TFF3Q07654 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC0.55□□□□□ -2.32
TFF3Q07654 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.55□□□□□ -2.32
TFF3Q07654 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC0.55□□□□□ -2.32
TFF3Q07654 RNU6-496P-201ENST00000516145 99 ntBASIC0.55□□□□□ -2.32
TFF3Q07654 AC016925.2-201ENST00000605108 242 ntBASIC0.55□□□□□ -2.32
TFF3Q07654 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC0.55□□□□□ -2.32
TFF3Q07654 MIR4496-201ENST00000635896 61 ntBASIC0.55□□□□□ -2.32
TFF3Q07654 AL022578.1-201ENST00000439330 1433 ntBASIC0.55□□□□□ -2.32
TFF3Q07654 RNA5SP276-201ENST00000362580 94 ntBASIC0.54□□□□□ -2.32
TFF3Q07654 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.54□□□□□ -2.32
TFF3Q07654 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC0.54□□□□□ -2.32
TFF3Q07654 ZNF965P-201ENST00000432501 817 ntBASIC0.54□□□□□ -2.32
TFF3Q07654 AL691517.1-201ENST00000440833 1235 ntBASIC0.54□□□□□ -2.32
TFF3Q07654 FAM206BP-201ENST00000510179 541 ntBASIC0.54□□□□□ -2.32
TFF3Q07654 AC093752.1-206ENST00000511823 336 ntBASIC0.54□□□□□ -2.32
TFF3Q07654 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.54□□□□□ -2.32
TFF3Q07654 AP003072.2-201ENST00000527756 676 ntBASIC0.54□□□□□ -2.32
TFF3Q07654 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.54□□□□□ -2.32
TFF3Q07654 AC006270.3-201ENST00000605967 1036 ntBASIC0.54□□□□□ -2.32
TFF3Q07654 AC103810.8-201ENST00000607347 118 ntBASIC0.54□□□□□ -2.32
TFF3Q07654 UCA1.1-201ENST00000620952 75 ntBASIC0.54□□□□□ -2.32
TFF3Q07654 AP003400.5-201ENST00000624827 617 ntBASIC0.54□□□□□ -2.32
TFF3Q07654 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.54□□□□□ -2.32
TFF3Q07654 AC004808.1-201ENST00000627671 721 ntBASIC0.54□□□□□ -2.32
TFF3Q07654 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.54□□□□□ -2.32
TFF3Q07654 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC0.54□□□□□ -2.32
TFF3Q07654 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
TFF3Q07654 ELL2P3-201ENST00000457883 1602 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms