Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 MTCYBP32-201ENST00000427945 1084 ntBASIC1.49□□□□□ -2.17
HIST1H3AP68431 SNRPEP9-201ENST00000436794 238 ntBASIC1.49□□□□□ -2.17
HIST1H3AP68431 RPL39P6-201ENST00000448289 150 ntBASIC1.49□□□□□ -2.17
HIST1H3AP68431 RPL7P55-201ENST00000450522 746 ntBASIC1.49□□□□□ -2.17
HIST1H3AP68431 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.49□□□□□ -2.17
HIST1H3AP68431 AC244505.3-201ENST00000454598 187 ntBASIC1.49□□□□□ -2.17
HIST1H3AP68431 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.49□□□□□ -2.17
HIST1H3AP68431 PPP1R2P5-201ENST00000457256 603 ntBASIC1.49□□□□□ -2.17
HIST1H3AP68431 HMGB1P35-201ENST00000503360 598 ntBASIC1.49□□□□□ -2.17
HIST1H3AP68431 AC091965.2-201ENST00000512324 613 ntBASIC1.49□□□□□ -2.17
HIST1H3AP68431 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.49□□□□□ -2.17
HIST1H3AP68431 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.49□□□□□ -2.17
HIST1H3AP68431 AC093677.1-201ENST00000514414 678 ntBASIC1.49□□□□□ -2.17
HIST1H3AP68431 SNORA4.4-201ENST00000515921 135 ntBASIC1.49□□□□□ -2.17
HIST1H3AP68431 RNU6-250P-201ENST00000516958 103 ntBASIC1.49□□□□□ -2.17
HIST1H3AP68431 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.49□□□□□ -2.17
HIST1H3AP68431 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.49□□□□□ -2.17
HIST1H3AP68431 AC012435.1-202ENST00000568772 240 ntBASIC1.49□□□□□ -2.17
HIST1H3AP68431 AC090615.1-201ENST00000577519 154 ntBASIC1.49□□□□□ -2.17
HIST1H3AP68431 NRBF2P1-201ENST00000587407 859 ntBASIC1.49□□□□□ -2.17
HIST1H3AP68431 AL357094.1-201ENST00000603845 844 ntBASIC1.49□□□□□ -2.17
HIST1H3AP68431 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.49□□□□□ -2.17
HIST1H3AP68431 AL138478.1-201ENST00000612252 832 ntBASIC1.49□□□□□ -2.17
HIST1H3AP68431 uc_338.14-201ENST00000613162 166 ntBASIC1.49□□□□□ -2.17
HIST1H3AP68431 AL773524.1-201ENST00000614065 229 ntBASIC1.49□□□□□ -2.17
HIST1H3AP68431 AC009233.1-201ENST00000616477 371 ntBASIC1.49□□□□□ -2.17
HIST1H3AP68431 AC024581.2-201ENST00000619986 252 ntBASIC1.49□□□□□ -2.17
HIST1H3AP68431 AL158801.5-201ENST00000623123 465 ntBASIC1.49□□□□□ -2.17
HIST1H3AP68431 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.49□□□□□ -2.17
HIST1H3AP68431 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.48□□□□□ -2.17
HIST1H3AP68431 RNU4-27P-201ENST00000410889 139 ntBASIC1.48□□□□□ -2.17
HIST1H3AP68431 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.48□□□□□ -2.17
HIST1H3AP68431 AL158823.1-201ENST00000418441 478 ntBASIC1.48□□□□□ -2.17
HIST1H3AP68431 AL139421.1-201ENST00000423010 169 ntBASIC1.48□□□□□ -2.17
HIST1H3AP68431 SKA2P1-201ENST00000425592 390 ntBASIC1.48□□□□□ -2.17
HIST1H3AP68431 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.48□□□□□ -2.17
HIST1H3AP68431 TRIM60P13-201ENST00000432350 1283 ntBASIC1.48□□□□□ -2.17
HIST1H3AP68431 MTND6P13-201ENST00000443510 523 ntBASIC1.48□□□□□ -2.17
HIST1H3AP68431 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.48□□□□□ -2.17
HIST1H3AP68431 RPL7P12-201ENST00000446719 750 ntBASIC1.48□□□□□ -2.17
HIST1H3AP68431 BZW1P2-201ENST00000473537 826 ntBASIC1.48□□□□□ -2.17
HIST1H3AP68431 AC079203.1-201ENST00000487972 404 ntBASIC1.48□□□□□ -2.17
HIST1H3AP68431 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.48□□□□□ -2.17
HIST1H3AP68431 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.48□□□□□ -2.17
HIST1H3AP68431 SMURF2P1-201ENST00000514992 481 ntBASIC1.48□□□□□ -2.17
HIST1H3AP68431 SNORD19.2-201ENST00000516978 73 ntBASIC1.48□□□□□ -2.17
HIST1H3AP68431 SNORA76.2-201ENST00000517095 137 ntBASIC1.48□□□□□ -2.17
HIST1H3AP68431 RNA5SP290-201ENST00000517133 127 ntBASIC1.48□□□□□ -2.17
HIST1H3AP68431 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.48□□□□□ -2.17
HIST1H3AP68431 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.48□□□□□ -2.17
HIST1H3AP68431 AK6P1-201ENST00000540219 478 ntBASIC1.48□□□□□ -2.17
HIST1H3AP68431 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.48□□□□□ -2.17
HIST1H3AP68431 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.48□□□□□ -2.17
HIST1H3AP68431 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC1.48□□□□□ -2.17
HIST1H3AP68431 DEFB122-202ENST00000569013 197 ntBASIC1.48□□□□□ -2.17
HIST1H3AP68431 AC124283.4-201ENST00000581815 456 ntBASIC1.48□□□□□ -2.17
HIST1H3AP68431 MIR6845-201ENST00000613182 61 ntBASIC1.48□□□□□ -2.17
HIST1H3AP68431 AL118556.2-201ENST00000614375 824 ntBASIC1.48□□□□□ -2.17
HIST1H3AP68431 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
HIST1H3AP68431 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
HIST1H3AP68431 SNORA23-201ENST00000365128 182 ntBASIC1.47□□□□□ -2.17
HIST1H3AP68431 SUGT1P1-201ENST00000379514 476 ntBASIC1.47□□□□□ -2.17
HIST1H3AP68431 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
HIST1H3AP68431 RNU6-516P-201ENST00000411381 104 ntBASIC1.47□□□□□ -2.17
HIST1H3AP68431 AL158050.1-201ENST00000416077 457 ntBASIC1.47□□□□□ -2.17
HIST1H3AP68431 AC244636.1-201ENST00000421152 228 ntBASIC1.47□□□□□ -2.17
HIST1H3AP68431 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.47□□□□□ -2.17
HIST1H3AP68431 AC093155.1-201ENST00000440164 826 ntBASIC1.47□□□□□ -2.17
HIST1H3AP68431 MTCYBP11-201ENST00000447254 1109 ntBASIC1.47□□□□□ -2.17
HIST1H3AP68431 snoU13.15-201ENST00000459407 104 ntBASIC1.47□□□□□ -2.17
HIST1H3AP68431 AP001324.2-201ENST00000461163 319 ntBASIC1.47□□□□□ -2.17
HIST1H3AP68431 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.47□□□□□ -2.17
HIST1H3AP68431 AL160314.1-201ENST00000490836 438 ntBASIC1.47□□□□□ -2.17
HIST1H3AP68431 AC034222.1-201ENST00000494052 532 ntBASIC1.47□□□□□ -2.17
HIST1H3AP68431 AC022861.1-201ENST00000522981 663 ntBASIC1.47□□□□□ -2.17
HIST1H3AP68431 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.47□□□□□ -2.17
HIST1H3AP68431 AC233702.2-202ENST00000562547 291 ntBASIC1.47□□□□□ -2.17
HIST1H3AP68431 MTCYBP22-201ENST00000603788 447 ntBASIC1.47□□□□□ -2.17
HIST1H3AP68431 KATNBL1P5-201ENST00000605015 517 ntBASIC1.47□□□□□ -2.17
HIST1H3AP68431 AC004805.2-201ENST00000605382 482 ntBASIC1.47□□□□□ -2.17
HIST1H3AP68431 AC239868.4-201ENST00000608318 671 ntBASIC1.47□□□□□ -2.17
HIST1H3AP68431 AC002550.2-201ENST00000621246 394 ntBASIC1.47□□□□□ -2.17
HIST1H3AP68431 HPVC1-201ENST00000629899 1198 ntBASIC1.47□□□□□ -2.17
HIST1H3AP68431 AC087821.2-201ENST00000637086 450 ntBASIC1.47□□□□□ -2.17
HIST1H3AP68431 MKKS-204ENST00000639674 192 ntBASIC1.47□□□□□ -2.17
HIST1H3AP68431 AC005539.1-201ENST00000443768 1479 ntBASIC1.47□□□□□ -2.17
HIST1H3AP68431 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.47□□□□□ -2.17
HIST1H3AP68431 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.46□□□□□ -2.18
HIST1H3AP68431 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
HIST1H3AP68431 AL356292.1-201ENST00000283110 373 ntBASIC1.46□□□□□ -2.18
HIST1H3AP68431 RNU6-549P-201ENST00000384433 107 ntBASIC1.46□□□□□ -2.18
HIST1H3AP68431 RNU6-748P-201ENST00000384648 107 ntBASIC1.46□□□□□ -2.18
HIST1H3AP68431 Y_RNA.548-201ENST00000384656 105 ntBASIC1.46□□□□□ -2.18
HIST1H3AP68431 OR9R1P-201ENST00000412200 877 ntBASIC1.46□□□□□ -2.18
HIST1H3AP68431 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.46□□□□□ -2.18
HIST1H3AP68431 AL451054.2-201ENST00000420896 202 ntBASIC1.46□□□□□ -2.18
HIST1H3AP68431 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.46□□□□□ -2.18
HIST1H3AP68431 AL161651.1-201ENST00000440882 223 ntBASIC1.46□□□□□ -2.18
HIST1H3AP68431 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.46□□□□□ -2.18
HIST1H3AP68431 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms