Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.12□□□□□ -2.23
LSM3P62310 MIR4648-201ENST00000580107 72 ntBASIC1.12□□□□□ -2.23
LSM3P62310 MIR4713-201ENST00000582691 75 ntBASIC1.12□□□□□ -2.23
LSM3P62310 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.12□□□□□ -2.23
LSM3P62310 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.12□□□□□ -2.23
LSM3P62310 MIR6845-201ENST00000613182 61 ntBASIC1.12□□□□□ -2.23
LSM3P62310 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.12□□□□□ -2.23
LSM3P62310 AL359854.1-201ENST00000614203 1594 ntBASIC1.12□□□□□ -2.23
LSM3P62310 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.11□□□□□ -2.23
LSM3P62310 RNU6-486P-201ENST00000363116 107 ntBASIC1.11□□□□□ -2.23
LSM3P62310 RNU6-338P-201ENST00000383888 105 ntBASIC1.11□□□□□ -2.23
LSM3P62310 AL591034.2-201ENST00000402839 359 ntBASIC1.11□□□□□ -2.23
LSM3P62310 AL356131.1-201ENST00000405826 414 ntBASIC1.11□□□□□ -2.23
LSM3P62310 RNU6-174P-201ENST00000410406 106 ntBASIC1.11□□□□□ -2.23
LSM3P62310 RNU2-63P-201ENST00000410792 194 ntBASIC1.11□□□□□ -2.23
LSM3P62310 OR51A5P-201ENST00000415429 942 ntBASIC1.11□□□□□ -2.23
LSM3P62310 MTND2P6-201ENST00000455337 1030 ntBASIC1.11□□□□□ -2.23
LSM3P62310 HMGN2P23-201ENST00000456759 269 ntBASIC1.11□□□□□ -2.23
LSM3P62310 AC008379.1-201ENST00000463655 464 ntBASIC1.11□□□□□ -2.23
LSM3P62310 AC027575.1-201ENST00000481064 460 ntBASIC1.11□□□□□ -2.23
LSM3P62310 AC018868.1-201ENST00000491307 315 ntBASIC1.11□□□□□ -2.23
LSM3P62310 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.11□□□□□ -2.23
LSM3P62310 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC1.11□□□□□ -2.23
LSM3P62310 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.11□□□□□ -2.23
LSM3P62310 AC012414.2-201ENST00000559474 187 ntBASIC1.11□□□□□ -2.23
LSM3P62310 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC1.11□□□□□ -2.23
LSM3P62310 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.11□□□□□ -2.23
LSM3P62310 AL645939.4-201ENST00000604495 135 ntBASIC1.11□□□□□ -2.23
LSM3P62310 AC239803.2-201ENST00000610161 430 ntBASIC1.11□□□□□ -2.23
LSM3P62310 AC107075.1-201ENST00000613695 314 ntBASIC1.11□□□□□ -2.23
LSM3P62310 AC009032.1-201ENST00000617574 431 ntBASIC1.11□□□□□ -2.23
LSM3P62310 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.11□□□□□ -2.23
LSM3P62310 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.11□□□□□ -2.23
LSM3P62310 MTND5P11-201ENST00000511037 1812 ntBASIC1.1□□□□□ -2.23
LSM3P62310 MIR424-201ENST00000362227 98 ntBASIC1.1□□□□□ -2.23
LSM3P62310 RNU5E-8P-201ENST00000363502 116 ntBASIC1.1□□□□□ -2.23
LSM3P62310 AC019178.2-201ENST00000423595 505 ntBASIC1.1□□□□□ -2.23
LSM3P62310 AL160275.3-201ENST00000423876 471 ntBASIC1.1□□□□□ -2.23
LSM3P62310 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.1□□□□□ -2.23
LSM3P62310 AC098831.1-201ENST00000440661 216 ntBASIC1.1□□□□□ -2.23
LSM3P62310 AC034114.1-201ENST00000520293 285 ntBASIC1.1□□□□□ -2.23
LSM3P62310 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.1□□□□□ -2.23
LSM3P62310 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC1.1□□□□□ -2.23
LSM3P62310 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.1□□□□□ -2.23
LSM3P62310 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.1□□□□□ -2.23
LSM3P62310 AL356432.3-201ENST00000568952 465 ntBASIC1.1□□□□□ -2.23
LSM3P62310 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.1□□□□□ -2.23
LSM3P62310 AC091152.3-201ENST00000604227 325 ntBASIC1.1□□□□□ -2.23
LSM3P62310 AC004853.1-201ENST00000604902 698 ntBASIC1.1□□□□□ -2.23
LSM3P62310 AP000238.1-201ENST00000608759 426 ntBASIC1.1□□□□□ -2.23
LSM3P62310 AL138478.1-201ENST00000612252 832 ntBASIC1.1□□□□□ -2.23
LSM3P62310 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.1□□□□□ -2.23
LSM3P62310 AC097655.1-201ENST00000635075 318 ntBASIC1.1□□□□□ -2.23
LSM3P62310 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
LSM3P62310 SNORD115-3-201ENST00000363100 82 ntBASIC1.09□□□□□ -2.23
LSM3P62310 SNORA25B-201ENST00000365507 128 ntBASIC1.09□□□□□ -2.23
LSM3P62310 RNA5SP508-201ENST00000411327 119 ntBASIC1.09□□□□□ -2.23
LSM3P62310 UBE2V1P11-201ENST00000411559 285 ntBASIC1.09□□□□□ -2.23
LSM3P62310 RSU1P2-202ENST00000437884 485 ntBASIC1.09□□□□□ -2.23
LSM3P62310 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.09□□□□□ -2.23
LSM3P62310 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.09□□□□□ -2.23
LSM3P62310 HMGN2P10-201ENST00000448085 265 ntBASIC1.09□□□□□ -2.23
LSM3P62310 USP9YP34-201ENST00000453983 808 ntBASIC1.09□□□□□ -2.23
LSM3P62310 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.09□□□□□ -2.23
LSM3P62310 RNA5SP57-201ENST00000459463 123 ntBASIC1.09□□□□□ -2.23
LSM3P62310 RPS20P22-201ENST00000473700 357 ntBASIC1.09□□□□□ -2.23
LSM3P62310 AC114801.2-201ENST00000503825 781 ntBASIC1.09□□□□□ -2.23
LSM3P62310 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.09□□□□□ -2.23
LSM3P62310 RNA5SP112-201ENST00000515937 99 ntBASIC1.09□□□□□ -2.23
LSM3P62310 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.09□□□□□ -2.23
LSM3P62310 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.09□□□□□ -2.23
LSM3P62310 CYB5AP5-201ENST00000549779 389 ntBASIC1.09□□□□□ -2.23
LSM3P62310 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
LSM3P62310 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.09□□□□□ -2.23
LSM3P62310 MIR3199-2-201ENST00000636243 86 ntBASIC1.09□□□□□ -2.23
LSM3P62310 LINC02211-204ENST00000642024 1070 ntBASIC1.09□□□□□ -2.23
LSM3P62310 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.09□□□□□ -2.24
LSM3P62310 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
LSM3P62310 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
LSM3P62310 U8.13-201ENST00000390842 128 ntBASIC1.08□□□□□ -2.24
LSM3P62310 MIR934-201ENST00000401241 83 ntBASIC1.08□□□□□ -2.24
LSM3P62310 MIR1283-2-201ENST00000408621 87 ntBASIC1.08□□□□□ -2.24
LSM3P62310 CCDC58P2-201ENST00000417131 366 ntBASIC1.08□□□□□ -2.24
LSM3P62310 AC092634.6-201ENST00000418558 192 ntBASIC1.08□□□□□ -2.24
LSM3P62310 MTND4P24-201ENST00000424002 397 ntBASIC1.08□□□□□ -2.24
LSM3P62310 Z93242.1-201ENST00000427102 353 ntBASIC1.08□□□□□ -2.24
LSM3P62310 ZNF965P-201ENST00000432501 817 ntBASIC1.08□□□□□ -2.24
LSM3P62310 USP9YP24-201ENST00000434374 697 ntBASIC1.08□□□□□ -2.24
LSM3P62310 RPL7P36-201ENST00000444633 681 ntBASIC1.08□□□□□ -2.24
LSM3P62310 AC002381.1-201ENST00000447049 280 ntBASIC1.08□□□□□ -2.24
LSM3P62310 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.08□□□□□ -2.24
LSM3P62310 HGF-207ENST00000453018 721 ntTSL 3 BASIC1.08□□□□□ -2.24
LSM3P62310 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.08□□□□□ -2.24
LSM3P62310 RNA5SP291-201ENST00000517222 105 ntBASIC1.08□□□□□ -2.24
LSM3P62310 NRON-201ENST00000517270 370 ntBASIC1.08□□□□□ -2.24
LSM3P62310 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC1.08□□□□□ -2.24
LSM3P62310 AC124293.1-201ENST00000530034 493 ntBASIC1.08□□□□□ -2.24
LSM3P62310 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.08□□□□□ -2.24
LSM3P62310 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.08□□□□□ -2.24
LSM3P62310 AC093519.1-201ENST00000566109 298 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms