Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC010525.2-201ENST00000590920 195 ntBASIC2.74□□□□□ -1.97
LMO4P61968 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC2.74□□□□□ -1.97
LMO4P61968 AC068790.3-201ENST00000602988 553 ntBASIC2.74□□□□□ -1.97
LMO4P61968 AC012443.1-201ENST00000605605 231 ntBASIC2.74□□□□□ -1.97
LMO4P61968 AL590099.1-201ENST00000615276 138 ntBASIC2.74□□□□□ -1.97
LMO4P61968 AL159972.1-201ENST00000625150 448 ntBASIC2.74□□□□□ -1.97
LMO4P61968 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
LMO4P61968 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LMO4P61968 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.74□□□□□ -1.97
LMO4P61968 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
LMO4P61968 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
LMO4P61968 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.74□□□□□ -1.97
LMO4P61968 MTCO1P9-201ENST00000505577 1534 ntBASIC2.73□□□□□ -1.97
LMO4P61968 AC006020.1-201ENST00000420179 1854 ntBASIC2.73□□□□□ -1.97
LMO4P61968 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
LMO4P61968 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
LMO4P61968 AC009902.3-201ENST00000606235 2172 ntBASIC2.73□□□□□ -1.97
LMO4P61968 AC011460.1-201ENST00000636268 1834 ntBASIC2.73□□□□□ -1.97
LMO4P61968 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
LMO4P61968 TAB3P1-202ENST00000452645 1634 ntBASIC2.73□□□□□ -1.97
LMO4P61968 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
LMO4P61968 NACAP2-201ENST00000318548 624 ntBASIC2.73□□□□□ -1.97
LMO4P61968 Y_RNA.58-201ENST00000362807 102 ntBASIC2.73□□□□□ -1.97
LMO4P61968 Y_RNA.154-201ENST00000363624 102 ntBASIC2.73□□□□□ -1.97
LMO4P61968 RNY3P1-201ENST00000365085 102 ntBASIC2.73□□□□□ -1.97
LMO4P61968 RNY3-201ENST00000365484 102 ntBASIC2.73□□□□□ -1.97
LMO4P61968 Y_RNA.490-201ENST00000384413 102 ntBASIC2.73□□□□□ -1.97
LMO4P61968 RNU6-328P-201ENST00000390887 106 ntBASIC2.73□□□□□ -1.97
LMO4P61968 AL136116.1-201ENST00000403591 381 ntBASIC2.73□□□□□ -1.97
LMO4P61968 RNU6-1148P-201ENST00000410992 104 ntBASIC2.73□□□□□ -1.97
LMO4P61968 AC096664.2-201ENST00000411843 406 ntBASIC2.73□□□□□ -1.97
LMO4P61968 SSXP9-201ENST00000417503 292 ntBASIC2.73□□□□□ -1.97
LMO4P61968 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.73□□□□□ -1.97
LMO4P61968 AL353678.1-201ENST00000422735 741 ntBASIC2.73□□□□□ -1.97
LMO4P61968 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.73□□□□□ -1.97
LMO4P61968 MTCO3P46-201ENST00000425787 232 ntBASIC2.73□□□□□ -1.97
LMO4P61968 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.73□□□□□ -1.97
LMO4P61968 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
LMO4P61968 AC079781.2-201ENST00000446424 169 ntBASIC2.73□□□□□ -1.97
LMO4P61968 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.73□□□□□ -1.97
LMO4P61968 AC109925.1-201ENST00000478069 331 ntBASIC2.73□□□□□ -1.97
LMO4P61968 EIF4EP3-201ENST00000498782 656 ntBASIC2.73□□□□□ -1.97
LMO4P61968 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.73□□□□□ -1.97
LMO4P61968 AC020893.1-201ENST00000502452 580 ntBASIC2.73□□□□□ -1.97
LMO4P61968 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.73□□□□□ -1.97
LMO4P61968 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.73□□□□□ -1.97
LMO4P61968 VN1R104P-201ENST00000505115 1009 ntBASIC2.73□□□□□ -1.97
LMO4P61968 GMPSP1-201ENST00000514075 579 ntBASIC2.73□□□□□ -1.97
LMO4P61968 AC112206.3-201ENST00000514578 389 ntBASIC2.73□□□□□ -1.97
LMO4P61968 SNORD60.2-201ENST00000516883 86 ntBASIC2.73□□□□□ -1.97
LMO4P61968 AC107953.1-201ENST00000522216 297 ntBASIC2.73□□□□□ -1.97
LMO4P61968 SUB1P1-201ENST00000524415 382 ntBASIC2.73□□□□□ -1.97
LMO4P61968 PSMA2P1-201ENST00000526365 646 ntBASIC2.73□□□□□ -1.97
LMO4P61968 AC023050.3-201ENST00000541142 333 ntBASIC2.73□□□□□ -1.97
LMO4P61968 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2.73□□□□□ -1.97
LMO4P61968 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.73□□□□□ -1.97
LMO4P61968 MED28P6-201ENST00000558776 231 ntBASIC2.73□□□□□ -1.97
LMO4P61968 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC2.73□□□□□ -1.97
LMO4P61968 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.73□□□□□ -1.97
LMO4P61968 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.73□□□□□ -1.97
LMO4P61968 OR4K8P-201ENST00000578842 1048 ntBASIC2.73□□□□□ -1.97
LMO4P61968 MIR4738-201ENST00000579134 87 ntBASIC2.73□□□□□ -1.97
LMO4P61968 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.73□□□□□ -1.97
LMO4P61968 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.73□□□□□ -1.97
LMO4P61968 uc_338.12-201ENST00000616344 181 ntBASIC2.73□□□□□ -1.97
LMO4P61968 AL354950.2-201ENST00000617939 290 ntBASIC2.73□□□□□ -1.97
LMO4P61968 AC090617.10-201ENST00000624308 134 ntBASIC2.73□□□□□ -1.97
LMO4P61968 U6.98-201ENST00000637157 84 ntBASIC2.73□□□□□ -1.97
LMO4P61968 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
LMO4P61968 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
LMO4P61968 AC017071.1-201ENST00000564407 2204 ntBASIC2.73□□□□□ -1.97
LMO4P61968 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
LMO4P61968 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
LMO4P61968 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
LMO4P61968 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.73□□□□□ -1.97
LMO4P61968 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
LMO4P61968 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LMO4P61968 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.72□□□□□ -1.97
LMO4P61968 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
LMO4P61968 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
LMO4P61968 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LMO4P61968 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.72□□□□□ -1.97
LMO4P61968 AC002546.1-201ENST00000588041 2504 ntBASIC2.72□□□□□ -1.97
LMO4P61968 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
LMO4P61968 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.72□□□□□ -1.97
LMO4P61968 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LMO4P61968 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LMO4P61968 Y_RNA.367-201ENST00000365544 101 ntBASIC2.72□□□□□ -1.97
LMO4P61968 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LMO4P61968 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
LMO4P61968 RNU6-39P-201ENST00000384344 107 ntBASIC2.72□□□□□ -1.97
LMO4P61968 MIR135A2-201ENST00000384854 100 ntBASIC2.72□□□□□ -1.97
LMO4P61968 AL122016.1-201ENST00000403365 367 ntBASIC2.72□□□□□ -1.97
LMO4P61968 AL591034.1-201ENST00000407447 340 ntBASIC2.72□□□□□ -1.97
LMO4P61968 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.72□□□□□ -1.97
LMO4P61968 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.72□□□□□ -1.97
LMO4P61968 AC126124.2-201ENST00000413542 321 ntBASIC2.72□□□□□ -1.97
LMO4P61968 SRIP2-201ENST00000428470 166 ntBASIC2.72□□□□□ -1.97
LMO4P61968 AL365400.1-201ENST00000431854 640 ntBASIC2.72□□□□□ -1.97
LMO4P61968 TIMM9P1-201ENST00000436122 256 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms