Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AP006587.4-201ENST00000526053 529 ntBASIC2.68□□□□□ -1.98
SRP54P61011 AC123904.2-201ENST00000548059 300 ntBASIC2.68□□□□□ -1.98
SRP54P61011 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.68□□□□□ -1.98
SRP54P61011 AC009094.1-201ENST00000564443 426 ntBASIC2.68□□□□□ -1.98
SRP54P61011 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.68□□□□□ -1.98
SRP54P61011 AC103810.1-201ENST00000579873 453 ntBASIC2.68□□□□□ -1.98
SRP54P61011 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.68□□□□□ -1.98
SRP54P61011 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.68□□□□□ -1.98
SRP54P61011 AC010297.1-201ENST00000623948 149 ntBASIC2.68□□□□□ -1.98
SRP54P61011 AC079416.3-201ENST00000624479 549 ntBASIC2.68□□□□□ -1.98
SRP54P61011 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.68□□□□□ -1.98
SRP54P61011 ELF2P3-201ENST00000445099 1506 ntBASIC2.68□□□□□ -1.98
SRP54P61011 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.67□□□□□ -1.98
SRP54P61011 RNY3P13-201ENST00000365542 102 ntBASIC2.67□□□□□ -1.98
SRP54P61011 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
SRP54P61011 RNU6-809P-201ENST00000384461 107 ntBASIC2.67□□□□□ -1.98
SRP54P61011 MIR181A2-201ENST00000384863 110 ntBASIC2.67□□□□□ -1.98
SRP54P61011 RNU6-817P-201ENST00000391083 104 ntBASIC2.67□□□□□ -1.98
SRP54P61011 RNU2-49P-201ENST00000410666 184 ntBASIC2.67□□□□□ -1.98
SRP54P61011 RNU2-25P-201ENST00000411041 191 ntBASIC2.67□□□□□ -1.98
SRP54P61011 AL451074.5-201ENST00000415894 435 ntBASIC2.67□□□□□ -1.98
SRP54P61011 AC006366.1-201ENST00000422002 759 ntBASIC2.67□□□□□ -1.98
SRP54P61011 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.67□□□□□ -1.98
SRP54P61011 AC092427.1-202ENST00000430569 476 ntBASIC2.67□□□□□ -1.98
SRP54P61011 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.67□□□□□ -1.98
SRP54P61011 RPL22P17-201ENST00000438729 315 ntBASIC2.67□□□□□ -1.98
SRP54P61011 RPS15AP7-201ENST00000439294 405 ntBASIC2.67□□□□□ -1.98
SRP54P61011 MTND5P2-201ENST00000442927 1142 ntBASIC2.67□□□□□ -1.98
SRP54P61011 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.67□□□□□ -1.98
SRP54P61011 SNORD97-201ENST00000459187 142 ntBASIC2.67□□□□□ -1.98
SRP54P61011 AC003982.1-202ENST00000469928 248 ntBASIC2.67□□□□□ -1.98
SRP54P61011 AC107626.1-201ENST00000471084 183 ntBASIC2.67□□□□□ -1.98
SRP54P61011 RBM43P1-201ENST00000476891 1081 ntBASIC2.67□□□□□ -1.98
SRP54P61011 AC090525.1-201ENST00000479116 478 ntBASIC2.67□□□□□ -1.98
SRP54P61011 RPL23AP70-201ENST00000483361 460 ntBASIC2.67□□□□□ -1.98
SRP54P61011 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.67□□□□□ -1.98
SRP54P61011 RN7SKP287-201ENST00000516546 266 ntBASIC2.67□□□□□ -1.98
SRP54P61011 RN7SKP40-201ENST00000517211 242 ntBASIC2.67□□□□□ -1.98
SRP54P61011 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.67□□□□□ -1.98
SRP54P61011 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.67□□□□□ -1.98
SRP54P61011 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.67□□□□□ -1.98
SRP54P61011 OR1M4P-201ENST00000589199 287 ntBASIC2.67□□□□□ -1.98
SRP54P61011 AL670379.6-201ENST00000603753 252 ntBASIC2.67□□□□□ -1.98
SRP54P61011 AL670379.11-201ENST00000604059 253 ntBASIC2.67□□□□□ -1.98
SRP54P61011 AC008162.1-201ENST00000604718 254 ntBASIC2.67□□□□□ -1.98
SRP54P61011 AL670379.1-201ENST00000604752 252 ntBASIC2.67□□□□□ -1.98
SRP54P61011 AC093424.1-201ENST00000604999 338 ntBASIC2.67□□□□□ -1.98
SRP54P61011 AL670379.5-201ENST00000605253 252 ntBASIC2.67□□□□□ -1.98
SRP54P61011 AL670379.12-201ENST00000605291 253 ntBASIC2.67□□□□□ -1.98
SRP54P61011 AL670379.8-201ENST00000605353 252 ntBASIC2.67□□□□□ -1.98
SRP54P61011 AL670379.7-201ENST00000605823 252 ntBASIC2.67□□□□□ -1.98
SRP54P61011 AC034229.4-201ENST00000607861 441 ntBASIC2.67□□□□□ -1.98
SRP54P61011 AC108747.1-201ENST00000609508 535 ntBASIC2.67□□□□□ -1.98
SRP54P61011 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.67□□□□□ -1.98
SRP54P61011 FRG1KP-201ENST00000623592 341 ntBASIC2.67□□□□□ -1.98
SRP54P61011 FO624990.1-201ENST00000636373 85 ntBASIC2.67□□□□□ -1.98
SRP54P61011 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SRP54P61011 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SRP54P61011 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.66□□□□□ -1.98
SRP54P61011 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
SRP54P61011 RNA5SP393-201ENST00000363423 117 ntBASIC2.66□□□□□ -1.98
SRP54P61011 SET-203ENST00000372688 801 ntTSL 2 BASIC2.66□□□□□ -1.98
SRP54P61011 SNORD115.1-201ENST00000391109 76 ntBASIC2.66□□□□□ -1.98
SRP54P61011 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.66□□□□□ -1.98
SRP54P61011 RAC1P6-201ENST00000423911 575 ntBASIC2.66□□□□□ -1.98
SRP54P61011 MED14P1-201ENST00000430517 648 ntBASIC2.66□□□□□ -1.98
SRP54P61011 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.66□□□□□ -1.98
SRP54P61011 RPL36AP53-201ENST00000432891 316 ntBASIC2.66□□□□□ -1.98
SRP54P61011 AC118469.1-201ENST00000442943 488 ntBASIC2.66□□□□□ -1.98
SRP54P61011 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SRP54P61011 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.66□□□□□ -1.98
SRP54P61011 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.66□□□□□ -1.98
SRP54P61011 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.66□□□□□ -1.98
SRP54P61011 AC073901.1-201ENST00000462471 408 ntBASIC2.66□□□□□ -1.98
SRP54P61011 AC126389.1-201ENST00000477436 290 ntBASIC2.66□□□□□ -1.98
SRP54P61011 AC112204.1-201ENST00000502591 103 ntBASIC2.66□□□□□ -1.98
SRP54P61011 AC118465.1-201ENST00000513820 1271 ntBASIC2.66□□□□□ -1.98
SRP54P61011 AC096725.1-201ENST00000514266 313 ntBASIC2.66□□□□□ -1.98
SRP54P61011 RNU6-1129P-201ENST00000515964 104 ntBASIC2.66□□□□□ -1.98
SRP54P61011 SCARNA11.3-201ENST00000517276 130 ntBASIC2.66□□□□□ -1.98
SRP54P61011 HMGB1P41-201ENST00000520234 440 ntBASIC2.66□□□□□ -1.98
SRP54P61011 MTND4LP18-201ENST00000526864 291 ntBASIC2.66□□□□□ -1.98
SRP54P61011 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.66□□□□□ -1.98
SRP54P61011 MIR3605-201ENST00000583214 100 ntBASIC2.66□□□□□ -1.98
SRP54P61011 AC121334.2-201ENST00000605387 271 ntBASIC2.66□□□□□ -1.98
SRP54P61011 AL391813.2-201ENST00000609113 322 ntBASIC2.66□□□□□ -1.98
SRP54P61011 AL161734.1-201ENST00000609720 557 ntBASIC2.66□□□□□ -1.98
SRP54P61011 AC004223.4-201ENST00000612426 332 ntBASIC2.66□□□□□ -1.98
SRP54P61011 MIR7844-201ENST00000616161 122 ntBASIC2.66□□□□□ -1.98
SRP54P61011 AC140725.3-201ENST00000616193 880 ntBASIC2.66□□□□□ -1.98
SRP54P61011 AC005858.4-201ENST00000623191 700 ntBASIC2.66□□□□□ -1.98
SRP54P61011 AC092608.2-201ENST00000624427 218 ntBASIC2.66□□□□□ -1.98
SRP54P61011 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.66□□□□□ -1.98
SRP54P61011 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.66□□□□□ -1.98
SRP54P61011 AC093591.3-201ENST00000634516 308 ntBASIC2.66□□□□□ -1.98
SRP54P61011 AC010149.2-201ENST00000637608 315 ntBASIC2.66□□□□□ -1.98
SRP54P61011 AC092104.1-201ENST00000497346 1441 ntBASIC2.66□□□□□ -1.98
SRP54P61011 AL137003.2-201ENST00000606924 2538 ntBASIC2.66□□□□□ -1.98
SRP54P61011 ASNSP3-201ENST00000451989 1306 ntBASIC2.66□□□□□ -1.98
SRP54P61011 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms