Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.52□□□□□ -2.01
MSH6P52701 AC011260.1-201ENST00000578420 472 ntBASIC2.52□□□□□ -2.01
MSH6P52701 MIR3908-201ENST00000579798 126 ntBASIC2.52□□□□□ -2.01
MSH6P52701 AL353997.4-201ENST00000586196 166 ntBASIC2.52□□□□□ -2.01
MSH6P52701 AC011451.2-201ENST00000604303 598 ntBASIC2.52□□□□□ -2.01
MSH6P52701 AP000254.1-201ENST00000609934 520 ntBASIC2.52□□□□□ -2.01
MSH6P52701 AC090772.4-201ENST00000623599 362 ntBASIC2.52□□□□□ -2.01
MSH6P52701 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.52□□□□□ -2.01
MSH6P52701 AC099654.9-201ENST00000637055 678 ntBASIC2.52□□□□□ -2.01
MSH6P52701 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
MSH6P52701 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
MSH6P52701 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
MSH6P52701 Y_RNA.192-201ENST00000363977 102 ntBASIC2.51□□□□□ -2.01
MSH6P52701 RNU6-359P-201ENST00000365466 108 ntBASIC2.51□□□□□ -2.01
MSH6P52701 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
MSH6P52701 RPL23AP29-201ENST00000397284 453 ntBASIC2.51□□□□□ -2.01
MSH6P52701 AL354692.1-201ENST00000423044 315 ntBASIC2.51□□□□□ -2.01
MSH6P52701 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.51□□□□□ -2.01
MSH6P52701 LSM1P1-201ENST00000438629 273 ntBASIC2.51□□□□□ -2.01
MSH6P52701 THAP5P1-201ENST00000439089 262 ntBASIC2.51□□□□□ -2.01
MSH6P52701 RPS15AP7-201ENST00000439294 405 ntBASIC2.51□□□□□ -2.01
MSH6P52701 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.51□□□□□ -2.01
MSH6P52701 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.51□□□□□ -2.01
MSH6P52701 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.51□□□□□ -2.01
MSH6P52701 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.51□□□□□ -2.01
MSH6P52701 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.51□□□□□ -2.01
MSH6P52701 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.51□□□□□ -2.01
MSH6P52701 snoU13.8-201ENST00000458890 104 ntBASIC2.51□□□□□ -2.01
MSH6P52701 SETP11-201ENST00000473027 690 ntBASIC2.51□□□□□ -2.01
MSH6P52701 RPL37P25-201ENST00000507308 276 ntBASIC2.51□□□□□ -2.01
MSH6P52701 AC109445.1-201ENST00000512356 383 ntBASIC2.51□□□□□ -2.01
MSH6P52701 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.51□□□□□ -2.01
MSH6P52701 RNU6-714P-201ENST00000516963 103 ntBASIC2.51□□□□□ -2.01
MSH6P52701 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.51□□□□□ -2.01
MSH6P52701 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.51□□□□□ -2.01
MSH6P52701 CYCSP2-201ENST00000558168 301 ntBASIC2.51□□□□□ -2.01
MSH6P52701 AC023813.2-201ENST00000564321 469 ntBASIC2.51□□□□□ -2.01
MSH6P52701 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC2.51□□□□□ -2.01
MSH6P52701 DUXAP10-204ENST00000612052 616 ntBASIC2.51□□□□□ -2.01
MSH6P52701 AC006386.1-201ENST00000619436 415 ntBASIC2.51□□□□□ -2.01
MSH6P52701 AC027309.3-201ENST00000623419 351 ntBASIC2.51□□□□□ -2.01
MSH6P52701 AC010608.3-201ENST00000625048 527 ntBASIC2.51□□□□□ -2.01
MSH6P52701 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.51□□□□□ -2.01
MSH6P52701 AC233981.2-201ENST00000611524 1614 ntBASIC2.51□□□□□ -2.01
MSH6P52701 AC099654.7-201ENST00000635788 2127 ntBASIC2.51□□□□□ -2.01
MSH6P52701 Y_RNA.112-201ENST00000363250 102 ntBASIC2.5□□□□□ -2.01
MSH6P52701 RNU4-68P-201ENST00000364314 141 ntBASIC2.5□□□□□ -2.01
MSH6P52701 Z98749.2-208ENST00000381646 500 ntBASIC2.5□□□□□ -2.01
MSH6P52701 RNA5SP252-201ENST00000391131 119 ntBASIC2.5□□□□□ -2.01
MSH6P52701 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
MSH6P52701 MIR1284-201ENST00000408337 120 ntBASIC2.5□□□□□ -2.01
MSH6P52701 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.5□□□□□ -2.01
MSH6P52701 AL953862.1-201ENST00000423016 168 ntBASIC2.5□□□□□ -2.01
MSH6P52701 PPP1R11P2-201ENST00000423543 382 ntBASIC2.5□□□□□ -2.01
MSH6P52701 SUMO1P4-201ENST00000429430 302 ntBASIC2.5□□□□□ -2.01
MSH6P52701 AC002381.1-201ENST00000447049 280 ntBASIC2.5□□□□□ -2.01
MSH6P52701 RPL21P134-201ENST00000453468 483 ntBASIC2.5□□□□□ -2.01
MSH6P52701 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.5□□□□□ -2.01
MSH6P52701 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.5□□□□□ -2.01
MSH6P52701 MTND1P16-201ENST00000465177 898 ntBASIC2.5□□□□□ -2.01
MSH6P52701 AL049714.1-201ENST00000466686 347 ntBASIC2.5□□□□□ -2.01
MSH6P52701 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.5□□□□□ -2.01
MSH6P52701 AC119751.4-201ENST00000507498 357 ntBASIC2.5□□□□□ -2.01
MSH6P52701 AC116353.3-201ENST00000511215 249 ntBASIC2.5□□□□□ -2.01
MSH6P52701 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.5□□□□□ -2.01
MSH6P52701 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.5□□□□□ -2.01
MSH6P52701 OR6C7P-201ENST00000547875 934 ntBASIC2.5□□□□□ -2.01
MSH6P52701 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC2.5□□□□□ -2.01
MSH6P52701 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.5□□□□□ -2.01
MSH6P52701 GLUD1P4-201ENST00000590914 418 ntBASIC2.5□□□□□ -2.01
MSH6P52701 WISP1-OT1-201ENST00000602893 642 ntBASIC2.5□□□□□ -2.01
MSH6P52701 RNU4-5P-201ENST00000607255 135 ntBASIC2.5□□□□□ -2.01
MSH6P52701 AC131235.4-201ENST00000609288 620 ntBASIC2.5□□□□□ -2.01
MSH6P52701 AL157392.4-201ENST00000609756 345 ntBASIC2.5□□□□□ -2.01
MSH6P52701 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.5□□□□□ -2.01
MSH6P52701 AC116618.1-201ENST00000634617 774 ntBASIC2.5□□□□□ -2.01
MSH6P52701 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
MSH6P52701 RNU4-92P-201ENST00000363783 136 ntBASIC2.49□□□□□ -2.01
MSH6P52701 Y_RNA.465-201ENST00000384293 102 ntBASIC2.49□□□□□ -2.01
MSH6P52701 MIR1290-201ENST00000408735 78 ntBASIC2.49□□□□□ -2.01
MSH6P52701 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.49□□□□□ -2.01
MSH6P52701 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.49□□□□□ -2.01
MSH6P52701 AC234775.1-201ENST00000454247 670 ntBASIC2.49□□□□□ -2.01
MSH6P52701 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.49□□□□□ -2.01
MSH6P52701 AC021146.8-201ENST00000507455 733 ntBASIC2.49□□□□□ -2.01
MSH6P52701 RNU6-150P-201ENST00000516237 95 ntBASIC2.49□□□□□ -2.01
MSH6P52701 RNU6-798P-201ENST00000516912 103 ntBASIC2.49□□□□□ -2.01
MSH6P52701 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.49□□□□□ -2.01
MSH6P52701 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.49□□□□□ -2.01
MSH6P52701 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.49□□□□□ -2.01
MSH6P52701 AC106791.2-201ENST00000604680 391 ntBASIC2.49□□□□□ -2.01
MSH6P52701 AL139022.2-201ENST00000606934 443 ntBASIC2.49□□□□□ -2.01
MSH6P52701 AL158211.4-201ENST00000606988 584 ntBASIC2.49□□□□□ -2.01
MSH6P52701 AC012360.2-201ENST00000609349 391 ntBASIC2.49□□□□□ -2.01
MSH6P52701 AC090132.2-201ENST00000615881 347 ntBASIC2.49□□□□□ -2.01
MSH6P52701 AC006213.4-201ENST00000616184 634 ntBASIC2.49□□□□□ -2.01
MSH6P52701 DDX43P2-201ENST00000604753 1354 ntBASIC2.49□□□□□ -2.01
MSH6P52701 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
MSH6P52701 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
MSH6P52701 AC011477.1-204ENST00000623416 1325 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms