Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC063979.1-201ENST00000415539 377 ntBASIC3.22□□□□□ -1.89
CLCNKAP51800 RAC1P6-201ENST00000423911 575 ntBASIC3.22□□□□□ -1.89
CLCNKAP51800 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.22□□□□□ -1.89
CLCNKAP51800 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.22□□□□□ -1.89
CLCNKAP51800 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.22□□□□□ -1.89
CLCNKAP51800 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.22□□□□□ -1.89
CLCNKAP51800 RPL7P54-201ENST00000438336 674 ntBASIC3.22□□□□□ -1.89
CLCNKAP51800 AC006028.1-201ENST00000438379 402 ntBASIC3.22□□□□□ -1.89
CLCNKAP51800 BNIP3P2-201ENST00000441221 577 ntBASIC3.22□□□□□ -1.89
CLCNKAP51800 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.22□□□□□ -1.89
CLCNKAP51800 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CLCNKAP51800 Z75741.1-201ENST00000446793 314 ntBASIC3.22□□□□□ -1.89
CLCNKAP51800 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.22□□□□□ -1.89
CLCNKAP51800 FDX1P2-201ENST00000450769 375 ntBASIC3.22□□□□□ -1.89
CLCNKAP51800 AC027673.1-201ENST00000456245 405 ntBASIC3.22□□□□□ -1.89
CLCNKAP51800 RNU6-420P-201ENST00000458780 107 ntBASIC3.22□□□□□ -1.89
CLCNKAP51800 RPS4XP22-201ENST00000480755 780 ntBASIC3.22□□□□□ -1.89
CLCNKAP51800 MIR2276-201ENST00000516886 89 ntBASIC3.22□□□□□ -1.89
CLCNKAP51800 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.22□□□□□ -1.89
CLCNKAP51800 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.22□□□□□ -1.89
CLCNKAP51800 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.22□□□□□ -1.89
CLCNKAP51800 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.22□□□□□ -1.89
CLCNKAP51800 HIGD1AP1-201ENST00000550979 275 ntBASIC3.22□□□□□ -1.89
CLCNKAP51800 TRAV37-201ENST00000553906 342 ntBASIC3.22□□□□□ -1.89
CLCNKAP51800 MIR5004-201ENST00000579078 107 ntBASIC3.22□□□□□ -1.89
CLCNKAP51800 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.22□□□□□ -1.89
CLCNKAP51800 AC007363.1-201ENST00000604736 620 ntBASIC3.22□□□□□ -1.89
CLCNKAP51800 AC009570.1-201ENST00000609599 745 ntBASIC3.22□□□□□ -1.89
CLCNKAP51800 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.22□□□□□ -1.89
CLCNKAP51800 uc_338.1-201ENST00000612113 180 ntBASIC3.22□□□□□ -1.89
CLCNKAP51800 AC007014.2-201ENST00000615581 479 ntBASIC3.22□□□□□ -1.89
CLCNKAP51800 AC093648.1-201ENST00000623546 606 ntBASIC3.22□□□□□ -1.89
CLCNKAP51800 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.22□□□□□ -1.89
CLCNKAP51800 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.22□□□□□ -1.89
CLCNKAP51800 OR4G2P-202ENST00000641004 1759 ntBASIC3.22□□□□□ -1.89
CLCNKAP51800 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLCNKAP51800 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.22□□□□□ -1.89
CLCNKAP51800 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
CLCNKAP51800 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
CLCNKAP51800 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
CLCNKAP51800 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.21□□□□□ -1.89
CLCNKAP51800 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLCNKAP51800 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
CLCNKAP51800 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CLCNKAP51800 RNU1-75P-201ENST00000347264 129 ntBASIC3.21□□□□□ -1.9
CLCNKAP51800 MIR30E-201ENST00000362104 92 ntBASIC3.21□□□□□ -1.9
CLCNKAP51800 RNU1-70P-201ENST00000362618 164 ntBASIC3.21□□□□□ -1.9
CLCNKAP51800 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLCNKAP51800 SMIM11P1-201ENST00000369586 178 ntBASIC3.21□□□□□ -1.9
CLCNKAP51800 RNU6-483P-201ENST00000384088 108 ntBASIC3.21□□□□□ -1.9
CLCNKAP51800 AL591416.1-201ENST00000404015 867 ntBASIC3.21□□□□□ -1.9
CLCNKAP51800 AL357075.1-201ENST00000404107 726 ntBASIC3.21□□□□□ -1.9
CLCNKAP51800 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.21□□□□□ -1.9
CLCNKAP51800 AC018630.2-202ENST00000422992 927 ntBASIC3.21□□□□□ -1.9
CLCNKAP51800 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CLCNKAP51800 UBE2D3P2-201ENST00000424409 445 ntBASIC3.21□□□□□ -1.9
CLCNKAP51800 AL606489.2-201ENST00000433886 234 ntBASIC3.21□□□□□ -1.9
CLCNKAP51800 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.21□□□□□ -1.9
CLCNKAP51800 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.21□□□□□ -1.9
CLCNKAP51800 AC022364.2-201ENST00000457963 554 ntBASIC3.21□□□□□ -1.9
CLCNKAP51800 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.21□□□□□ -1.9
CLCNKAP51800 MTCO3P38-201ENST00000468910 766 ntBASIC3.21□□□□□ -1.9
CLCNKAP51800 AC109925.1-201ENST00000478069 331 ntBASIC3.21□□□□□ -1.9
CLCNKAP51800 RN7SL432P-201ENST00000484057 298 ntBASIC3.21□□□□□ -1.9
CLCNKAP51800 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.21□□□□□ -1.9
CLCNKAP51800 AC109927.2-201ENST00000506416 303 ntBASIC3.21□□□□□ -1.9
CLCNKAP51800 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.21□□□□□ -1.9
CLCNKAP51800 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.21□□□□□ -1.9
CLCNKAP51800 SNORD27.1-201ENST00000516319 72 ntBASIC3.21□□□□□ -1.9
CLCNKAP51800 RNA5SP380-201ENST00000517190 98 ntBASIC3.21□□□□□ -1.9
CLCNKAP51800 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.21□□□□□ -1.9
CLCNKAP51800 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.21□□□□□ -1.9
CLCNKAP51800 AC034105.3-201ENST00000565294 442 ntBASIC3.21□□□□□ -1.9
CLCNKAP51800 AC025678.1-201ENST00000567861 338 ntBASIC3.21□□□□□ -1.9
CLCNKAP51800 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.21□□□□□ -1.9
CLCNKAP51800 AC007621.1-201ENST00000604544 437 ntBASIC3.21□□□□□ -1.9
CLCNKAP51800 AL161756.2-201ENST00000604597 246 ntBASIC3.21□□□□□ -1.9
CLCNKAP51800 RBM11P1-201ENST00000604951 799 ntBASIC3.21□□□□□ -1.9
CLCNKAP51800 AC007619.2-201ENST00000605743 379 ntBASIC3.21□□□□□ -1.9
CLCNKAP51800 AC093788.1-201ENST00000609356 927 ntBASIC3.21□□□□□ -1.9
CLCNKAP51800 AL138880.2-201ENST00000616214 239 ntBASIC3.21□□□□□ -1.9
CLCNKAP51800 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.21□□□□□ -1.9
CLCNKAP51800 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.21□□□□□ -1.9
CLCNKAP51800 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
CLCNKAP51800 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.21□□□□□ -1.9
CLCNKAP51800 SRP72P2-201ENST00000344851 1979 ntBASIC3.21□□□□□ -1.9
CLCNKAP51800 MTND5P27-201ENST00000428871 1720 ntBASIC3.21□□□□□ -1.9
CLCNKAP51800 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLCNKAP51800 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLCNKAP51800 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.2□□□□□ -1.9
CLCNKAP51800 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.2□□□□□ -1.9
CLCNKAP51800 SNORA62.1-201ENST00000364287 154 ntBASIC3.2□□□□□ -1.9
CLCNKAP51800 Y_RNA.402-201ENST00000383972 102 ntBASIC3.2□□□□□ -1.9
CLCNKAP51800 RNU6-1158P-201ENST00000391167 107 ntBASIC3.2□□□□□ -1.9
CLCNKAP51800 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.2□□□□□ -1.9
CLCNKAP51800 AC114491.1-201ENST00000416095 246 ntBASIC3.2□□□□□ -1.9
CLCNKAP51800 RPL7L1P10-201ENST00000427790 463 ntBASIC3.2□□□□□ -1.9
CLCNKAP51800 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.2□□□□□ -1.9
CLCNKAP51800 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.2□□□□□ -1.9
CLCNKAP51800 AL353705.1-201ENST00000433468 480 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms