Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 DNAJC19P3-201ENST00000594491 331 ntBASIC1.36□□□□□ -2.19
RPL28P46779 AC078899.2-201ENST00000595282 212 ntBASIC1.36□□□□□ -2.19
RPL28P46779 AC099785.1-201ENST00000605697 437 ntBASIC1.36□□□□□ -2.19
RPL28P46779 AC009237.15-201ENST00000610252 501 ntBASIC1.36□□□□□ -2.19
RPL28P46779 DUSP12P1-201ENST00000612874 516 ntBASIC1.36□□□□□ -2.19
RPL28P46779 AC011939.3-201ENST00000613686 466 ntBASIC1.36□□□□□ -2.19
RPL28P46779 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
RPL28P46779 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.35□□□□□ -2.19
RPL28P46779 snoZ40.1-201ENST00000364540 72 ntBASIC1.35□□□□□ -2.19
RPL28P46779 RNU6-432P-201ENST00000384196 109 ntBASIC1.35□□□□□ -2.19
RPL28P46779 MIR221-201ENST00000385135 110 ntBASIC1.35□□□□□ -2.19
RPL28P46779 MIR23A-201ENST00000385245 73 ntBASIC1.35□□□□□ -2.19
RPL28P46779 RPL17P50-201ENST00000396131 546 ntBASIC1.35□□□□□ -2.19
RPL28P46779 AL356421.1-201ENST00000403255 413 ntBASIC1.35□□□□□ -2.19
RPL28P46779 BTF3P7-201ENST00000407097 488 ntBASIC1.35□□□□□ -2.19
RPL28P46779 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.35□□□□□ -2.19
RPL28P46779 RNU2-68P-201ENST00000410878 191 ntBASIC1.35□□□□□ -2.19
RPL28P46779 EDDM3CP-201ENST00000415977 425 ntBASIC1.35□□□□□ -2.19
RPL28P46779 UBE2FP1-201ENST00000416536 447 ntBASIC1.35□□□□□ -2.19
RPL28P46779 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.35□□□□□ -2.19
RPL28P46779 USP9YP26-201ENST00000421008 661 ntBASIC1.35□□□□□ -2.19
RPL28P46779 PTP4A1P7-201ENST00000423476 514 ntBASIC1.35□□□□□ -2.19
RPL28P46779 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.35□□□□□ -2.19
RPL28P46779 RPL21P134-201ENST00000453468 483 ntBASIC1.35□□□□□ -2.19
RPL28P46779 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.35□□□□□ -2.19
RPL28P46779 AC005410.1-202ENST00000460347 485 ntBASIC1.35□□□□□ -2.19
RPL28P46779 RPL23AP41-201ENST00000484754 458 ntBASIC1.35□□□□□ -2.19
RPL28P46779 AC107032.1-201ENST00000485945 480 ntBASIC1.35□□□□□ -2.19
RPL28P46779 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.35□□□□□ -2.19
RPL28P46779 AC104090.1-201ENST00000506341 1171 ntBASIC1.35□□□□□ -2.19
RPL28P46779 AC008628.1-201ENST00000508663 265 ntBASIC1.35□□□□□ -2.19
RPL28P46779 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.35□□□□□ -2.19
RPL28P46779 MTCO3P27-201ENST00000514397 196 ntBASIC1.35□□□□□ -2.19
RPL28P46779 RNU6-703P-201ENST00000516946 107 ntBASIC1.35□□□□□ -2.19
RPL28P46779 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.35□□□□□ -2.19
RPL28P46779 AP003122.3-201ENST00000526316 255 ntBASIC1.35□□□□□ -2.19
RPL28P46779 DUXAP1-201ENST00000556632 463 ntBASIC1.35□□□□□ -2.19
RPL28P46779 AC023825.1-201ENST00000566704 1030 ntBASIC1.35□□□□□ -2.19
RPL28P46779 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.35□□□□□ -2.19
RPL28P46779 AL627230.6-201ENST00000611129 280 ntBASIC1.35□□□□□ -2.19
RPL28P46779 AC244517.12-201ENST00000623581 663 ntBASIC1.35□□□□□ -2.19
RPL28P46779 AC243829.7-201ENST00000633081 225 ntBASIC1.35□□□□□ -2.19
RPL28P46779 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.35□□□□□ -2.19
RPL28P46779 AC099063.3-201ENST00000642066 185 ntBASIC1.35□□□□□ -2.19
RPL28P46779 ADAM3A-203ENST00000461344 2157 ntBASIC1.35□□□□□ -2.19
RPL28P46779 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.35□□□□□ -2.19
RPL28P46779 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.34□□□□□ -2.19
RPL28P46779 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
RPL28P46779 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
RPL28P46779 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
RPL28P46779 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
RPL28P46779 RNU6-1167P-201ENST00000363227 94 ntBASIC1.34□□□□□ -2.19
RPL28P46779 Y_RNA.111-201ENST00000363248 100 ntBASIC1.34□□□□□ -2.19
RPL28P46779 AL139397.2-201ENST00000404529 772 ntBASIC1.34□□□□□ -2.19
RPL28P46779 RPS24P7-201ENST00000416921 246 ntBASIC1.34□□□□□ -2.19
RPL28P46779 BTF3L4P3-201ENST00000418879 476 ntBASIC1.34□□□□□ -2.19
RPL28P46779 USP9YP21-201ENST00000420603 432 ntBASIC1.34□□□□□ -2.19
RPL28P46779 AL353729.1-201ENST00000425044 720 ntBASIC1.34□□□□□ -2.19
RPL28P46779 AIMP1P2-201ENST00000425294 312 ntBASIC1.34□□□□□ -2.19
RPL28P46779 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.34□□□□□ -2.19
RPL28P46779 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.34□□□□□ -2.19
RPL28P46779 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.34□□□□□ -2.19
RPL28P46779 MTATP6P30-201ENST00000443540 664 ntBASIC1.34□□□□□ -2.19
RPL28P46779 NDUFAF4P2-201ENST00000445374 520 ntBASIC1.34□□□□□ -2.19
RPL28P46779 AL353705.4-201ENST00000449661 238 ntBASIC1.34□□□□□ -2.19
RPL28P46779 MTCO1P42-201ENST00000457379 726 ntBASIC1.34□□□□□ -2.19
RPL28P46779 AP001324.2-201ENST00000461163 319 ntBASIC1.34□□□□□ -2.19
RPL28P46779 AC104563.1-201ENST00000476147 376 ntBASIC1.34□□□□□ -2.19
RPL28P46779 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.34□□□□□ -2.19
RPL28P46779 RPS15AP36-201ENST00000492022 382 ntBASIC1.34□□□□□ -2.19
RPL28P46779 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.34□□□□□ -2.19
RPL28P46779 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.34□□□□□ -2.19
RPL28P46779 AC023538.1-201ENST00000534576 736 ntBASIC1.34□□□□□ -2.19
RPL28P46779 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
RPL28P46779 MRPS36P5-201ENST00000551909 298 ntBASIC1.34□□□□□ -2.19
RPL28P46779 AC026464.5-201ENST00000562497 722 ntBASIC1.34□□□□□ -2.19
RPL28P46779 AL049838.1-201ENST00000563647 981 ntBASIC1.34□□□□□ -2.19
RPL28P46779 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.34□□□□□ -2.19
RPL28P46779 MIR3167-201ENST00000579623 85 ntBASIC1.34□□□□□ -2.19
RPL28P46779 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.34□□□□□ -2.19
RPL28P46779 AL355598.1-201ENST00000604169 202 ntBASIC1.34□□□□□ -2.19
RPL28P46779 AL161798.1-201ENST00000604630 131 ntBASIC1.34□□□□□ -2.19
RPL28P46779 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.34□□□□□ -2.19
RPL28P46779 AC231657.1-201ENST00000624313 397 ntBASIC1.34□□□□□ -2.19
RPL28P46779 AL356094.1-201ENST00000624663 1212 ntBASIC1.34□□□□□ -2.19
RPL28P46779 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
RPL28P46779 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.34□□□□□ -2.19
RPL28P46779 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.2
RPL28P46779 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
RPL28P46779 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.33□□□□□ -2.2
RPL28P46779 RNU6-1159P-201ENST00000362933 107 ntBASIC1.33□□□□□ -2.2
RPL28P46779 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.33□□□□□ -2.2
RPL28P46779 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.33□□□□□ -2.2
RPL28P46779 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.33□□□□□ -2.2
RPL28P46779 AL512604.1-201ENST00000404812 257 ntBASIC1.33□□□□□ -2.2
RPL28P46779 RNA5SP425-201ENST00000410336 112 ntBASIC1.33□□□□□ -2.2
RPL28P46779 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.33□□□□□ -2.2
RPL28P46779 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.33□□□□□ -2.2
RPL28P46779 ZNF90P2-204ENST00000419323 1075 ntBASIC1.33□□□□□ -2.2
RPL28P46779 HMGN2P19-201ENST00000425149 265 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms