Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RNU6-483P-201ENST00000384088 108 ntBASIC2.8□□□□□ -1.96
NKX2-1P43699 SNORA24.1-201ENST00000384401 135 ntBASIC2.8□□□□□ -1.96
NKX2-1P43699 RPS12P24-201ENST00000412619 387 ntBASIC2.8□□□□□ -1.96
NKX2-1P43699 TRIAP1P1-201ENST00000427062 225 ntBASIC2.8□□□□□ -1.96
NKX2-1P43699 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.8□□□□□ -1.96
NKX2-1P43699 GPM6BP2-201ENST00000432046 144 ntBASIC2.8□□□□□ -1.96
NKX2-1P43699 AL591704.1-201ENST00000432574 275 ntBASIC2.8□□□□□ -1.96
NKX2-1P43699 AL606489.2-201ENST00000433886 234 ntBASIC2.8□□□□□ -1.96
NKX2-1P43699 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.8□□□□□ -1.96
NKX2-1P43699 AL714022.1-201ENST00000439897 151 ntBASIC2.8□□□□□ -1.96
NKX2-1P43699 GPM6BP1-201ENST00000446387 144 ntBASIC2.8□□□□□ -1.96
NKX2-1P43699 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.8□□□□□ -1.96
NKX2-1P43699 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.8□□□□□ -1.96
NKX2-1P43699 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.8□□□□□ -1.96
NKX2-1P43699 RNU7-23P-201ENST00000459465 62 ntBASIC2.8□□□□□ -1.96
NKX2-1P43699 MTCO3P38-201ENST00000468910 766 ntBASIC2.8□□□□□ -1.96
NKX2-1P43699 AL163973.1-201ENST00000484753 577 ntBASIC2.8□□□□□ -1.96
NKX2-1P43699 AC026427.2-201ENST00000506228 536 ntBASIC2.8□□□□□ -1.96
NKX2-1P43699 RN7SKP219-201ENST00000516825 296 ntBASIC2.8□□□□□ -1.96
NKX2-1P43699 RNU6-143P-201ENST00000516942 93 ntBASIC2.8□□□□□ -1.96
NKX2-1P43699 AC245166.1-201ENST00000521012 253 ntBASIC2.8□□□□□ -1.96
NKX2-1P43699 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC2.8□□□□□ -1.96
NKX2-1P43699 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.8□□□□□ -1.96
NKX2-1P43699 AP005435.4-201ENST00000529514 284 ntBASIC2.8□□□□□ -1.96
NKX2-1P43699 MTCO3P24-201ENST00000572729 782 ntBASIC2.8□□□□□ -1.96
NKX2-1P43699 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.8□□□□□ -1.96
NKX2-1P43699 BNIP3P9-201ENST00000603714 553 ntBASIC2.8□□□□□ -1.96
NKX2-1P43699 AC004852.3-201ENST00000614131 326 ntBASIC2.8□□□□□ -1.96
NKX2-1P43699 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.8□□□□□ -1.96
NKX2-1P43699 AC073308.1-201ENST00000623696 305 ntBASIC2.8□□□□□ -1.96
NKX2-1P43699 PTER-201ENST00000298942 3448 ntTSL 5 BASIC2.8□□□□□ -1.96
NKX2-1P43699 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
NKX2-1P43699 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
NKX2-1P43699 MTND5P27-201ENST00000428871 1720 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
NKX2-1P43699 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
NKX2-1P43699 AC008669.1-201ENST00000565823 2178 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
NKX2-1P43699 RNU6-179P-201ENST00000363350 107 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 RNY3P3-201ENST00000363816 102 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 Y_RNA.256-201ENST00000364594 104 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 RNU4-12P-201ENST00000365233 139 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 SNORD115-7-201ENST00000365306 82 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.79□□□□□ -1.96
NKX2-1P43699 Y_RNA.409-201ENST00000383990 98 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 RNU6-198P-201ENST00000384258 104 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 RNA5SP252-201ENST00000391131 119 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 AL354719.1-201ENST00000406535 843 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 RNA5SP118-201ENST00000410385 109 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 RN7SKP263-201ENST00000411194 309 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
NKX2-1P43699 AC080125.1-201ENST00000414888 684 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.79□□□□□ -1.96
NKX2-1P43699 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
NKX2-1P43699 AC114491.1-201ENST00000416095 246 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.79□□□□□ -1.96
NKX2-1P43699 BTF3L4P3-201ENST00000418879 476 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 AC099548.1-201ENST00000421443 426 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.79□□□□□ -1.96
NKX2-1P43699 MTCO1P20-201ENST00000425366 358 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 RPL21P40-201ENST00000428586 483 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 MRPS10P2-201ENST00000431226 381 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 MTND1P18-201ENST00000448191 573 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.79□□□□□ -1.96
NKX2-1P43699 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.79□□□□□ -1.96
NKX2-1P43699 NUTF2P7-201ENST00000453086 375 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.79□□□□□ -1.96
NKX2-1P43699 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.79□□□□□ -1.96
NKX2-1P43699 RPL7P5-201ENST00000471472 736 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 RPL23AP11-201ENST00000475260 469 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.79□□□□□ -1.96
NKX2-1P43699 RNU6-928P-201ENST00000516876 104 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 SNORD60.2-201ENST00000516883 86 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 RNA5SP471-201ENST00000516971 106 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.79□□□□□ -1.96
NKX2-1P43699 OR5B19P-201ENST00000531766 928 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 DNAJC8P1-201ENST00000554535 372 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 AL138976.2-201ENST00000563989 694 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.79□□□□□ -1.96
NKX2-1P43699 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.79□□□□□ -1.96
NKX2-1P43699 AC087499.8-201ENST00000578406 226 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.79□□□□□ -1.96
NKX2-1P43699 Z84480.1-201ENST00000605131 311 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 AL359547.2-201ENST00000615810 418 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 AC011155.2-201ENST00000623202 216 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.79□□□□□ -1.96
NKX2-1P43699 SRP72P2-201ENST00000344851 1979 ntBASIC2.79□□□□□ -1.96
NKX2-1P43699 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.79□□□□□ -1.96
NKX2-1P43699 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.79□□□□□ -1.96
NKX2-1P43699 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
NKX2-1P43699 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
NKX2-1P43699 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.78□□□□□ -1.96
NKX2-1P43699 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
NKX2-1P43699 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC2.78□□□□□ -1.96
NKX2-1P43699 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
NKX2-1P43699 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
NKX2-1P43699 RNU6-799P-201ENST00000363567 107 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 RNU6-188P-201ENST00000364207 107 ntBASIC2.78□□□□□ -1.96
NKX2-1P43699 RNU6-534P-201ENST00000364877 106 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 163.3 ms