Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.8□□□□□ -1.96
SOX3P41225 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.8□□□□□ -1.96
SOX3P41225 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.8□□□□□ -1.96
SOX3P41225 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.8□□□□□ -1.96
SOX3P41225 AL451007.1-201ENST00000595491 289 ntBASIC2.8□□□□□ -1.96
SOX3P41225 AC009570.1-201ENST00000609599 745 ntBASIC2.8□□□□□ -1.96
SOX3P41225 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.8□□□□□ -1.96
SOX3P41225 AC135507.2-201ENST00000612443 309 ntBASIC2.8□□□□□ -1.96
SOX3P41225 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
SOX3P41225 AC138649.3-201ENST00000622154 254 ntBASIC2.8□□□□□ -1.96
SOX3P41225 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.8□□□□□ -1.96
SOX3P41225 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
SOX3P41225 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.8□□□□□ -1.96
SOX3P41225 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SOX3P41225 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SOX3P41225 AC073343.1-201ENST00000328239 651 ntBASIC2.79□□□□□ -1.96
SOX3P41225 Y_RNA.41-201ENST00000362646 102 ntBASIC2.79□□□□□ -1.96
SOX3P41225 RNU6-1097P-201ENST00000363586 107 ntBASIC2.79□□□□□ -1.96
SOX3P41225 RN7SKP226-201ENST00000364912 300 ntBASIC2.79□□□□□ -1.96
SOX3P41225 RNU6-108P-201ENST00000365558 107 ntBASIC2.79□□□□□ -1.96
SOX3P41225 RNU6-701P-201ENST00000384059 107 ntBASIC2.79□□□□□ -1.96
SOX3P41225 RNU6-14P-201ENST00000384630 106 ntBASIC2.79□□□□□ -1.96
SOX3P41225 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.79□□□□□ -1.96
SOX3P41225 UBA52P6-201ENST00000399822 382 ntBASIC2.79□□□□□ -1.96
SOX3P41225 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.79□□□□□ -1.96
SOX3P41225 Z85995.1-201ENST00000415547 335 ntBASIC2.79□□□□□ -1.96
SOX3P41225 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.79□□□□□ -1.96
SOX3P41225 MED13P1-201ENST00000428342 171 ntBASIC2.79□□□□□ -1.96
SOX3P41225 AL590383.1-201ENST00000428602 75 ntBASIC2.79□□□□□ -1.96
SOX3P41225 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.79□□□□□ -1.96
SOX3P41225 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.79□□□□□ -1.96
SOX3P41225 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.79□□□□□ -1.96
SOX3P41225 AC087588.1-201ENST00000462203 316 ntBASIC2.79□□□□□ -1.96
SOX3P41225 RPS20P22-201ENST00000473700 357 ntBASIC2.79□□□□□ -1.96
SOX3P41225 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.79□□□□□ -1.96
SOX3P41225 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.79□□□□□ -1.96
SOX3P41225 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.79□□□□□ -1.96
SOX3P41225 OR5G4P-201ENST00000525251 760 ntBASIC2.79□□□□□ -1.96
SOX3P41225 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.79□□□□□ -1.96
SOX3P41225 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.79□□□□□ -1.96
SOX3P41225 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.79□□□□□ -1.96
SOX3P41225 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.79□□□□□ -1.96
SOX3P41225 AL163153.1-201ENST00000554223 283 ntBASIC2.79□□□□□ -1.96
SOX3P41225 AC245505.1-201ENST00000556398 224 ntBASIC2.79□□□□□ -1.96
SOX3P41225 H3F3AP1-201ENST00000559984 334 ntBASIC2.79□□□□□ -1.96
SOX3P41225 EIF1P4-201ENST00000572664 335 ntBASIC2.79□□□□□ -1.96
SOX3P41225 AC011471.1-201ENST00000585766 187 ntBASIC2.79□□□□□ -1.96
SOX3P41225 AC012119.1-201ENST00000603184 222 ntBASIC2.79□□□□□ -1.96
SOX3P41225 AL022154.1-201ENST00000604698 785 ntBASIC2.79□□□□□ -1.96
SOX3P41225 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.79□□□□□ -1.96
SOX3P41225 AC122108.2-201ENST00000611946 526 ntBASIC2.79□□□□□ -1.96
SOX3P41225 AL390240.1-201ENST00000612950 384 ntBASIC2.79□□□□□ -1.96
SOX3P41225 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.79□□□□□ -1.96
SOX3P41225 AL359740.1-201ENST00000624340 592 ntBASIC2.79□□□□□ -1.96
SOX3P41225 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.79□□□□□ -1.96
SOX3P41225 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.79□□□□□ -1.96
SOX3P41225 LRRC77P-213ENST00000637727 880 ntBASIC2.79□□□□□ -1.96
SOX3P41225 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
SOX3P41225 CUL1P1-201ENST00000509510 2425 ntBASIC2.79□□□□□ -1.96
SOX3P41225 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.79□□□□□ -1.96
SOX3P41225 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SOX3P41225 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.78□□□□□ -1.96
SOX3P41225 AC000403.1-201ENST00000613696 3585 ntBASIC2.78□□□□□ -1.96
SOX3P41225 MTND5P29-201ENST00000458676 1807 ntBASIC2.78□□□□□ -1.96
SOX3P41225 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
SOX3P41225 AC073325.2-201ENST00000339545 159 ntBASIC2.78□□□□□ -1.96
SOX3P41225 Y_RNA.22-201ENST00000362492 102 ntBASIC2.78□□□□□ -1.96
SOX3P41225 Y_RNA.296-201ENST00000364930 108 ntBASIC2.78□□□□□ -1.96
SOX3P41225 SMIM11P1-201ENST00000369586 178 ntBASIC2.78□□□□□ -1.96
SOX3P41225 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SOX3P41225 SNORA44-201ENST00000384584 132 ntBASIC2.78□□□□□ -1.96
SOX3P41225 MIR181B1-201ENST00000385240 110 ntBASIC2.78□□□□□ -1.96
SOX3P41225 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.78□□□□□ -1.96
SOX3P41225 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SOX3P41225 RPL7P46-201ENST00000425129 740 ntBASIC2.78□□□□□ -1.96
SOX3P41225 AC022018.1-201ENST00000430685 241 ntBASIC2.78□□□□□ -1.96
SOX3P41225 GPR143P-201ENST00000434155 205 ntBASIC2.78□□□□□ -1.96
SOX3P41225 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.78□□□□□ -1.96
SOX3P41225 AC079781.2-201ENST00000446424 169 ntBASIC2.78□□□□□ -1.96
SOX3P41225 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.78□□□□□ -1.96
SOX3P41225 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.78□□□□□ -1.96
SOX3P41225 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.78□□□□□ -1.96
SOX3P41225 RPL21P41-201ENST00000459863 264 ntBASIC2.78□□□□□ -1.96
SOX3P41225 AC023194.1-201ENST00000493084 308 ntBASIC2.78□□□□□ -1.96
SOX3P41225 RPL30P5-201ENST00000494923 336 ntBASIC2.78□□□□□ -1.96
SOX3P41225 AC107401.1-201ENST00000503426 685 ntBASIC2.78□□□□□ -1.96
SOX3P41225 HMGB1P29-201ENST00000505659 499 ntBASIC2.78□□□□□ -1.96
SOX3P41225 TTC39CP1-201ENST00000512513 755 ntBASIC2.78□□□□□ -1.96
SOX3P41225 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.78□□□□□ -1.96
SOX3P41225 CASP1P1-201ENST00000526345 212 ntBASIC2.78□□□□□ -1.96
SOX3P41225 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.78□□□□□ -1.96
SOX3P41225 AC098848.2-201ENST00000588023 330 ntBASIC2.78□□□□□ -1.96
SOX3P41225 AC002545.1-201ENST00000592511 181 ntBASIC2.78□□□□□ -1.96
SOX3P41225 DPPA3P3-201ENST00000603842 430 ntBASIC2.78□□□□□ -1.96
SOX3P41225 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.78□□□□□ -1.96
SOX3P41225 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
SOX3P41225 AC034102.8-201ENST00000615146 484 ntBASIC2.78□□□□□ -1.96
SOX3P41225 AC007998.5-201ENST00000622938 237 ntBASIC2.78□□□□□ -1.96
SOX3P41225 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SOX3P41225 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.78□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms