Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC1.86□□□□□ -2.11
COL5A1P20908 UBE2FP3-201ENST00000436366 524 ntBASIC1.86□□□□□ -2.11
COL5A1P20908 DNAJC19P4-201ENST00000440115 345 ntBASIC1.86□□□□□ -2.11
COL5A1P20908 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.86□□□□□ -2.11
COL5A1P20908 EEF1E1P1-201ENST00000446998 430 ntBASIC1.86□□□□□ -2.11
COL5A1P20908 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.86□□□□□ -2.11
COL5A1P20908 MTCO3P2-201ENST00000457365 171 ntBASIC1.86□□□□□ -2.11
COL5A1P20908 AC092798.1-201ENST00000458542 409 ntBASIC1.86□□□□□ -2.11
COL5A1P20908 MTND4LP3-201ENST00000468320 276 ntBASIC1.86□□□□□ -2.11
COL5A1P20908 BZW1P2-201ENST00000473537 826 ntBASIC1.86□□□□□ -2.11
COL5A1P20908 NCOR1P1-202ENST00000486162 291 ntBASIC1.86□□□□□ -2.11
COL5A1P20908 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.86□□□□□ -2.11
COL5A1P20908 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.86□□□□□ -2.11
COL5A1P20908 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.86□□□□□ -2.11
COL5A1P20908 SETP2-201ENST00000553886 926 ntBASIC1.86□□□□□ -2.11
COL5A1P20908 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.86□□□□□ -2.11
COL5A1P20908 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.86□□□□□ -2.11
COL5A1P20908 AC103987.3-201ENST00000582071 292 ntBASIC1.86□□□□□ -2.11
COL5A1P20908 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC1.86□□□□□ -2.11
COL5A1P20908 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.86□□□□□ -2.11
COL5A1P20908 AC121247.2-201ENST00000604776 136 ntBASIC1.86□□□□□ -2.11
COL5A1P20908 AL158063.1-201ENST00000615349 536 ntBASIC1.86□□□□□ -2.11
COL5A1P20908 AC025588.4-201ENST00000615802 908 ntBASIC1.86□□□□□ -2.11
COL5A1P20908 AC025048.6-202ENST00000627667 438 ntBASIC1.86□□□□□ -2.11
COL5A1P20908 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.86□□□□□ -2.11
COL5A1P20908 AP000553.5-201ENST00000641933 54 ntBASIC1.86□□□□□ -2.11
COL5A1P20908 AC103988.1-201ENST00000566382 2177 ntBASIC1.86□□□□□ -2.11
COL5A1P20908 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.86□□□□□ -2.11
COL5A1P20908 SNORA4.1-201ENST00000364263 144 ntBASIC1.85□□□□□ -2.11
COL5A1P20908 RNU6-723P-201ENST00000383973 107 ntBASIC1.85□□□□□ -2.11
COL5A1P20908 AL138880.1-201ENST00000405824 642 ntBASIC1.85□□□□□ -2.11
COL5A1P20908 AL513331.1-201ENST00000411908 397 ntBASIC1.85□□□□□ -2.11
COL5A1P20908 TPMTP3-201ENST00000411928 735 ntBASIC1.85□□□□□ -2.11
COL5A1P20908 AL365203.2-201ENST00000423444 196 ntBASIC1.85□□□□□ -2.11
COL5A1P20908 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.85□□□□□ -2.11
COL5A1P20908 AL512286.1-201ENST00000439244 400 ntBASIC1.85□□□□□ -2.11
COL5A1P20908 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.85□□□□□ -2.11
COL5A1P20908 AL590664.1-201ENST00000448065 339 ntBASIC1.85□□□□□ -2.11
COL5A1P20908 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.85□□□□□ -2.11
COL5A1P20908 snoU13.7-201ENST00000459220 104 ntBASIC1.85□□□□□ -2.11
COL5A1P20908 AP000852.1-201ENST00000472460 573 ntBASIC1.85□□□□□ -2.11
COL5A1P20908 AHI1-208ENST00000488690 712 ntTSL 5 BASIC1.85□□□□□ -2.11
COL5A1P20908 AC007182.2-201ENST00000489251 402 ntBASIC1.85□□□□□ -2.11
COL5A1P20908 AC091435.1-201ENST00000505442 584 ntBASIC1.85□□□□□ -2.11
COL5A1P20908 AC116347.2-201ENST00000514912 523 ntBASIC1.85□□□□□ -2.11
COL5A1P20908 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.85□□□□□ -2.11
COL5A1P20908 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.85□□□□□ -2.11
COL5A1P20908 SYF2P1-201ENST00000550658 413 ntBASIC1.85□□□□□ -2.11
COL5A1P20908 AC012435.1-202ENST00000568772 240 ntBASIC1.85□□□□□ -2.11
COL5A1P20908 SNRPGP15-201ENST00000600149 222 ntBASIC1.85□□□□□ -2.11
COL5A1P20908 AC068790.6-201ENST00000602558 258 ntBASIC1.85□□□□□ -2.11
COL5A1P20908 AP001981.2-201ENST00000603241 418 ntBASIC1.85□□□□□ -2.11
COL5A1P20908 AC009314.1-201ENST00000603871 304 ntBASIC1.85□□□□□ -2.11
COL5A1P20908 AC064872.1-201ENST00000604823 1072 ntBASIC1.85□□□□□ -2.11
COL5A1P20908 BX248123.2-201ENST00000606318 124 ntBASIC1.85□□□□□ -2.11
COL5A1P20908 AC024560.3-201ENST00000608482 349 ntBASIC1.85□□□□□ -2.11
COL5A1P20908 AC026585.1-201ENST00000619582 524 ntBASIC1.85□□□□□ -2.11
COL5A1P20908 AC090582.1-201ENST00000636321 199 ntBASIC1.85□□□□□ -2.11
COL5A1P20908 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.85□□□□□ -2.11
COL5A1P20908 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC1.85□□□□□ -2.11
COL5A1P20908 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
COL5A1P20908 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.84□□□□□ -2.11
COL5A1P20908 RNU6-500P-201ENST00000362349 107 ntBASIC1.84□□□□□ -2.11
COL5A1P20908 RNU5D-1-201ENST00000363299 116 ntBASIC1.84□□□□□ -2.11
COL5A1P20908 RNU1-101P-201ENST00000391171 127 ntBASIC1.84□□□□□ -2.11
COL5A1P20908 RNU6-192P-201ENST00000391253 100 ntBASIC1.84□□□□□ -2.11
COL5A1P20908 AL627390.1-201ENST00000396055 340 ntBASIC1.84□□□□□ -2.11
COL5A1P20908 AL031577.2-201ENST00000404133 280 ntBASIC1.84□□□□□ -2.11
COL5A1P20908 RNU2-66P-201ENST00000410650 161 ntBASIC1.84□□□□□ -2.11
COL5A1P20908 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC1.84□□□□□ -2.11
COL5A1P20908 USP9YP33-201ENST00000412220 421 ntBASIC1.84□□□□□ -2.11
COL5A1P20908 ZNF885P-201ENST00000420174 1098 ntBASIC1.84□□□□□ -2.11
COL5A1P20908 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.84□□□□□ -2.11
COL5A1P20908 AC006548.1-201ENST00000427470 102 ntBASIC1.84□□□□□ -2.11
COL5A1P20908 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.84□□□□□ -2.11
COL5A1P20908 AC023347.2-201ENST00000433994 462 ntBASIC1.84□□□□□ -2.11
COL5A1P20908 USP9YP35-201ENST00000435696 412 ntBASIC1.84□□□□□ -2.11
COL5A1P20908 HIGD1AP11-201ENST00000438361 280 ntBASIC1.84□□□□□ -2.11
COL5A1P20908 RPL23AP58-201ENST00000440453 469 ntBASIC1.84□□□□□ -2.11
COL5A1P20908 MTCO1P48-201ENST00000448024 1096 ntBASIC1.84□□□□□ -2.11
COL5A1P20908 NDUFA5P7-201ENST00000452914 242 ntBASIC1.84□□□□□ -2.11
COL5A1P20908 SNORD42A-201ENST00000459584 64 ntBASIC1.84□□□□□ -2.11
COL5A1P20908 AC109486.1-201ENST00000486833 374 ntBASIC1.84□□□□□ -2.11
COL5A1P20908 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
COL5A1P20908 LTV1P1-201ENST00000510683 1237 ntBASIC1.84□□□□□ -2.11
COL5A1P20908 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.11
COL5A1P20908 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC1.84□□□□□ -2.11
COL5A1P20908 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.84□□□□□ -2.11
COL5A1P20908 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.84□□□□□ -2.11
COL5A1P20908 ZNF705CP-201ENST00000530515 889 ntBASIC1.84□□□□□ -2.11
COL5A1P20908 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
COL5A1P20908 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.84□□□□□ -2.11
COL5A1P20908 AC007115.1-201ENST00000546853 234 ntBASIC1.84□□□□□ -2.11
COL5A1P20908 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.84□□□□□ -2.11
COL5A1P20908 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.84□□□□□ -2.11
COL5A1P20908 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC1.84□□□□□ -2.11
COL5A1P20908 MIR4446-201ENST00000578505 67 ntBASIC1.84□□□□□ -2.11
COL5A1P20908 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.84□□□□□ -2.11
COL5A1P20908 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.84□□□□□ -2.11
COL5A1P20908 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms