Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 MIR3683-201ENST00000580847 82 ntBASIC1.65□□□□□ -2.15
HLA-DQB2P05538 AL391813.1-201ENST00000603098 260 ntBASIC1.65□□□□□ -2.15
HLA-DQB2P05538 AC068944.2-201ENST00000610373 403 ntBASIC1.65□□□□□ -2.15
HLA-DQB2P05538 AL138478.1-201ENST00000612252 832 ntBASIC1.65□□□□□ -2.15
HLA-DQB2P05538 AC005332.6-201ENST00000613178 446 ntBASIC1.65□□□□□ -2.15
HLA-DQB2P05538 AP001486.3-201ENST00000615334 372 ntBASIC1.65□□□□□ -2.15
HLA-DQB2P05538 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HLA-DQB2P05538 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC1.64□□□□□ -2.15
HLA-DQB2P05538 AL589826.1-201ENST00000340697 249 ntBASIC1.64□□□□□ -2.15
HLA-DQB2P05538 SNORA23-201ENST00000365128 182 ntBASIC1.64□□□□□ -2.15
HLA-DQB2P05538 MIR764-201ENST00000390811 85 ntBASIC1.64□□□□□ -2.15
HLA-DQB2P05538 RN7SKP284-201ENST00000411002 343 ntBASIC1.64□□□□□ -2.15
HLA-DQB2P05538 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.64□□□□□ -2.15
HLA-DQB2P05538 ZNF90P2-204ENST00000419323 1075 ntBASIC1.64□□□□□ -2.15
HLA-DQB2P05538 AC003685.2-201ENST00000422795 395 ntBASIC1.64□□□□□ -2.15
HLA-DQB2P05538 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.64□□□□□ -2.15
HLA-DQB2P05538 MOB1AP2-201ENST00000446060 614 ntBASIC1.64□□□□□ -2.15
HLA-DQB2P05538 AC002381.1-201ENST00000447049 280 ntBASIC1.64□□□□□ -2.15
HLA-DQB2P05538 AC244505.3-201ENST00000454598 187 ntBASIC1.64□□□□□ -2.15
HLA-DQB2P05538 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.64□□□□□ -2.15
HLA-DQB2P05538 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.64□□□□□ -2.15
HLA-DQB2P05538 RNU6-840P-201ENST00000517275 65 ntBASIC1.64□□□□□ -2.15
HLA-DQB2P05538 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC1.64□□□□□ -2.15
HLA-DQB2P05538 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.64□□□□□ -2.15
HLA-DQB2P05538 AP005229.2-201ENST00000609980 697 ntBASIC1.64□□□□□ -2.15
HLA-DQB2P05538 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.64□□□□□ -2.15
HLA-DQB2P05538 SDR42E1P2-201ENST00000614861 481 ntBASIC1.64□□□□□ -2.15
HLA-DQB2P05538 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
HLA-DQB2P05538 SDR42E1P4-201ENST00000620894 481 ntBASIC1.64□□□□□ -2.15
HLA-DQB2P05538 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.64□□□□□ -2.15
HLA-DQB2P05538 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.64□□□□□ -2.15
HLA-DQB2P05538 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
HLA-DQB2P05538 AC107982.1-201ENST00000507171 1300 ntBASIC1.64□□□□□ -2.15
HLA-DQB2P05538 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
HLA-DQB2P05538 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.63□□□□□ -2.15
HLA-DQB2P05538 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
HLA-DQB2P05538 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
HLA-DQB2P05538 AL138713.1-201ENST00000624026 2130 ntBASIC1.63□□□□□ -2.15
HLA-DQB2P05538 RNU6-343P-201ENST00000364709 104 ntBASIC1.63□□□□□ -2.15
HLA-DQB2P05538 RNA5SP363-201ENST00000365072 115 ntBASIC1.63□□□□□ -2.15
HLA-DQB2P05538 RNU6-359P-201ENST00000365466 108 ntBASIC1.63□□□□□ -2.15
HLA-DQB2P05538 RNU6-637P-201ENST00000384050 107 ntBASIC1.63□□□□□ -2.15
HLA-DQB2P05538 RNU1-148P-201ENST00000384472 162 ntBASIC1.63□□□□□ -2.15
HLA-DQB2P05538 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC1.63□□□□□ -2.15
HLA-DQB2P05538 PTGES3P2-201ENST00000407942 482 ntBASIC1.63□□□□□ -2.15
HLA-DQB2P05538 USP9YP19-201ENST00000412165 485 ntBASIC1.63□□□□□ -2.15
HLA-DQB2P05538 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DQB2P05538 USP9YP13-201ENST00000417797 480 ntBASIC1.63□□□□□ -2.15
HLA-DQB2P05538 EIF4EP4-201ENST00000424916 578 ntBASIC1.63□□□□□ -2.15
HLA-DQB2P05538 SKA2P1-201ENST00000425592 390 ntBASIC1.63□□□□□ -2.15
HLA-DQB2P05538 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.63□□□□□ -2.15
HLA-DQB2P05538 MTND2P20-201ENST00000440805 661 ntBASIC1.63□□□□□ -2.15
HLA-DQB2P05538 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DQB2P05538 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DQB2P05538 USP9YP10-201ENST00000454868 628 ntBASIC1.63□□□□□ -2.15
HLA-DQB2P05538 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.63□□□□□ -2.15
HLA-DQB2P05538 RNA5SP233-201ENST00000459153 113 ntBASIC1.63□□□□□ -2.15
HLA-DQB2P05538 AC034222.1-201ENST00000494052 532 ntBASIC1.63□□□□□ -2.15
HLA-DQB2P05538 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.63□□□□□ -2.15
HLA-DQB2P05538 RNU2-44P-201ENST00000516795 194 ntBASIC1.63□□□□□ -2.15
HLA-DQB2P05538 RNU6-714P-201ENST00000516963 103 ntBASIC1.63□□□□□ -2.15
HLA-DQB2P05538 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DQB2P05538 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DQB2P05538 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DQB2P05538 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
HLA-DQB2P05538 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DQB2P05538 MIR4298-201ENST00000584380 73 ntBASIC1.63□□□□□ -2.15
HLA-DQB2P05538 AC069304.2-201ENST00000605154 435 ntBASIC1.63□□□□□ -2.15
HLA-DQB2P05538 AL583856.2-201ENST00000606298 543 ntBASIC1.63□□□□□ -2.15
HLA-DQB2P05538 AC024257.5-201ENST00000612739 531 ntBASIC1.63□□□□□ -2.15
HLA-DQB2P05538 AC073592.7-201ENST00000623659 507 ntBASIC1.63□□□□□ -2.15
HLA-DQB2P05538 AC091953.2-201ENST00000623979 160 ntBASIC1.63□□□□□ -2.15
HLA-DQB2P05538 AC091932.3-201ENST00000624223 323 ntBASIC1.63□□□□□ -2.15
HLA-DQB2P05538 AC025048.6-202ENST00000627667 438 ntBASIC1.63□□□□□ -2.15
HLA-DQB2P05538 U2.21-201ENST00000637295 81 ntBASIC1.63□□□□□ -2.15
HLA-DQB2P05538 AC006026.1-201ENST00000444025 1803 ntBASIC1.63□□□□□ -2.15
HLA-DQB2P05538 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
HLA-DQB2P05538 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.62□□□□□ -2.15
HLA-DQB2P05538 RNA5SP190-201ENST00000365222 118 ntBASIC1.62□□□□□ -2.15
HLA-DQB2P05538 CCNG1P1-201ENST00000406783 885 ntBASIC1.62□□□□□ -2.15
HLA-DQB2P05538 NDUFS5P4-201ENST00000412983 318 ntBASIC1.62□□□□□ -2.15
HLA-DQB2P05538 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.62□□□□□ -2.15
HLA-DQB2P05538 TPMTP2-201ENST00000414372 726 ntBASIC1.62□□□□□ -2.15
HLA-DQB2P05538 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.62□□□□□ -2.15
HLA-DQB2P05538 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.62□□□□□ -2.15
HLA-DQB2P05538 AC093106.2-201ENST00000428212 385 ntBASIC1.62□□□□□ -2.15
HLA-DQB2P05538 RPL30P4-201ENST00000429309 333 ntBASIC1.62□□□□□ -2.15
HLA-DQB2P05538 MTCO1P3-201ENST00000429327 192 ntBASIC1.62□□□□□ -2.15
HLA-DQB2P05538 ZYG11AP1-201ENST00000430329 837 ntBASIC1.62□□□□□ -2.15
HLA-DQB2P05538 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.62□□□□□ -2.15
HLA-DQB2P05538 USP9YP22-201ENST00000438971 294 ntBASIC1.62□□□□□ -2.15
HLA-DQB2P05538 AC016691.1-201ENST00000441321 413 ntBASIC1.62□□□□□ -2.15
HLA-DQB2P05538 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.62□□□□□ -2.15
HLA-DQB2P05538 AC079776.3-201ENST00000450665 370 ntBASIC1.62□□□□□ -2.15
HLA-DQB2P05538 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.62□□□□□ -2.15
HLA-DQB2P05538 SNORD13-201ENST00000459299 104 ntBASIC1.62□□□□□ -2.15
HLA-DQB2P05538 AC055731.1-201ENST00000474387 401 ntBASIC1.62□□□□□ -2.15
HLA-DQB2P05538 AC092902.1-201ENST00000486999 259 ntBASIC1.62□□□□□ -2.15
HLA-DQB2P05538 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
HLA-DQB2P05538 AC026414.1-201ENST00000504046 698 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms