Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 RPL30P11-201ENST00000495304 339 ntBASIC0.72□□□□□ -2.29
SPTA1P02549 AC026801.1-201ENST00000497178 464 ntBASIC0.72□□□□□ -2.29
SPTA1P02549 HMGB1P22-201ENST00000505315 124 ntBASIC0.72□□□□□ -2.29
SPTA1P02549 AC091965.2-201ENST00000512324 613 ntBASIC0.72□□□□□ -2.29
SPTA1P02549 CYP2C61P-201ENST00000604072 290 ntBASIC0.72□□□□□ -2.29
SPTA1P02549 AL161912.3-201ENST00000605404 628 ntBASIC0.72□□□□□ -2.29
SPTA1P02549 AC006249.1-201ENST00000621223 471 ntBASIC0.72□□□□□ -2.29
SPTA1P02549 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC0.72□□□□□ -2.29
SPTA1P02549 ZNF37BP-203ENST00000452306 1352 ntBASIC0.72□□□□□ -2.29
SPTA1P02549 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
SPTA1P02549 MT-TP-201ENST00000387461 68 ntBASIC0.72□□□□□ -2.29
SPTA1P02549 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC0.72□□□□□ -2.29
SPTA1P02549 MTND4LP21-201ENST00000415303 295 ntBASIC0.72□□□□□ -2.29
SPTA1P02549 MTND4P11-201ENST00000417020 1058 ntBASIC0.72□□□□□ -2.29
SPTA1P02549 RNF2P1-201ENST00000442955 1010 ntBASIC0.72□□□□□ -2.29
SPTA1P02549 AC093510.2-201ENST00000562820 896 ntBASIC0.72□□□□□ -2.29
SPTA1P02549 AC133485.1-201ENST00000567176 124 ntBASIC0.72□□□□□ -2.29
SPTA1P02549 AC138907.6-201ENST00000568401 126 ntBASIC0.72□□□□□ -2.29
SPTA1P02549 AC135178.6-201ENST00000605314 398 ntBASIC0.72□□□□□ -2.29
SPTA1P02549 AC005332.10-201ENST00000612725 619 ntBASIC0.72□□□□□ -2.29
SPTA1P02549 AC139769.3-201ENST00000618383 175 ntBASIC0.72□□□□□ -2.29
SPTA1P02549 MIR6866-201ENST00000638146 69 ntBASIC0.72□□□□□ -2.29
SPTA1P02549 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC0.71□□□□□ -2.3
SPTA1P02549 CISD1P1-201ENST00000393907 327 ntBASIC0.71□□□□□ -2.3
SPTA1P02549 TMEM167AP1-201ENST00000423409 219 ntBASIC0.71□□□□□ -2.3
SPTA1P02549 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC0.71□□□□□ -2.3
SPTA1P02549 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.71□□□□□ -2.3
SPTA1P02549 AC117454.1-201ENST00000491120 168 ntBASIC0.71□□□□□ -2.3
SPTA1P02549 MRPS33P3-201ENST00000513456 322 ntBASIC0.71□□□□□ -2.3
SPTA1P02549 AC012557.2-201ENST00000605919 418 ntBASIC0.71□□□□□ -2.3
SPTA1P02549 RNU6-600P-201ENST00000362524 99 ntBASIC0.7□□□□□ -2.3
SPTA1P02549 RNU6-1293P-201ENST00000384077 107 ntBASIC0.7□□□□□ -2.3
SPTA1P02549 RNU6-72P-201ENST00000384285 79 ntBASIC0.7□□□□□ -2.3
SPTA1P02549 MIR627-201ENST00000384979 97 ntBASIC0.7□□□□□ -2.3
SPTA1P02549 Y_RNA.610-201ENST00000410681 103 ntBASIC0.7□□□□□ -2.3
SPTA1P02549 AC004022.2-201ENST00000413824 193 ntBASIC0.7□□□□□ -2.3
SPTA1P02549 OR51AB1P-201ENST00000429046 620 ntBASIC0.7□□□□□ -2.3
SPTA1P02549 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
SPTA1P02549 AC105914.1-201ENST00000511798 226 ntBASIC0.7□□□□□ -2.3
SPTA1P02549 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC0.7□□□□□ -2.3
SPTA1P02549 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC0.7□□□□□ -2.3
SPTA1P02549 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.7□□□□□ -2.3
SPTA1P02549 AL355810.1-201ENST00000614629 552 ntBASIC0.7□□□□□ -2.3
SPTA1P02549 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC0.7□□□□□ -2.3
SPTA1P02549 RNU6-156P-201ENST00000621869 107 ntBASIC0.7□□□□□ -2.3
SPTA1P02549 uc_338.22-201ENST00000622722 187 ntBASIC0.7□□□□□ -2.3
SPTA1P02549 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC0.7□□□□□ -2.3
SPTA1P02549 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC0.7□□□□□ -2.3
SPTA1P02549 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
SPTA1P02549 OR4G2P-201ENST00000328113 903 ntBASIC0.7□□□□□ -2.3
SPTA1P02549 RNY4P3-201ENST00000365254 95 ntBASIC0.7□□□□□ -2.3
SPTA1P02549 UBE2D3P2-201ENST00000424409 445 ntBASIC0.7□□□□□ -2.3
SPTA1P02549 AL022238.1-201ENST00000442557 355 ntBASIC0.7□□□□□ -2.3
SPTA1P02549 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.7□□□□□ -2.3
SPTA1P02549 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.7□□□□□ -2.3
SPTA1P02549 AC010099.1-201ENST00000455434 375 ntBASIC0.7□□□□□ -2.3
SPTA1P02549 EIF4EP3-201ENST00000498782 656 ntBASIC0.7□□□□□ -2.3
SPTA1P02549 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC0.7□□□□□ -2.3
SPTA1P02549 SNORA48.11-201ENST00000517015 89 ntBASIC0.7□□□□□ -2.3
SPTA1P02549 CIR1P1-201ENST00000524055 1133 ntBASIC0.7□□□□□ -2.3
SPTA1P02549 AC022387.2-201ENST00000604050 448 ntBASIC0.7□□□□□ -2.3
SPTA1P02549 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC0.7□□□□□ -2.3
SPTA1P02549 AC109809.1-201ENST00000619665 545 ntBASIC0.7□□□□□ -2.3
SPTA1P02549 AL606495.1-201ENST00000422100 813 ntBASIC0.69□□□□□ -2.3
SPTA1P02549 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.69□□□□□ -2.3
SPTA1P02549 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC0.69□□□□□ -2.3
SPTA1P02549 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.69□□□□□ -2.3
SPTA1P02549 RPL23AP33-201ENST00000442301 452 ntBASIC0.69□□□□□ -2.3
SPTA1P02549 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC0.69□□□□□ -2.3
SPTA1P02549 SYPL1P1-201ENST00000473622 768 ntBASIC0.69□□□□□ -2.3
SPTA1P02549 AC087272.1-201ENST00000523624 533 ntBASIC0.69□□□□□ -2.3
SPTA1P02549 AP004371.1-201ENST00000525240 214 ntBASIC0.69□□□□□ -2.3
SPTA1P02549 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.69□□□□□ -2.3
SPTA1P02549 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
SPTA1P02549 LINC00933-203ENST00000559812 219 ntBASIC0.69□□□□□ -2.3
SPTA1P02549 AC090616.5-202ENST00000582111 297 ntBASIC0.69□□□□□ -2.3
SPTA1P02549 AC106052.1-201ENST00000608029 497 ntBASIC0.69□□□□□ -2.3
SPTA1P02549 AC018755.4-201ENST00000619715 454 ntBASIC0.69□□□□□ -2.3
SPTA1P02549 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC0.69□□□□□ -2.3
SPTA1P02549 MIR7515-201ENST00000637837 67 ntBASIC0.69□□□□□ -2.3
SPTA1P02549 RNU6-30P-201ENST00000384561 107 ntBASIC0.69□□□□□ -2.3
SPTA1P02549 AL138880.1-201ENST00000405824 642 ntBASIC0.69□□□□□ -2.3
SPTA1P02549 AL356776.1-201ENST00000406574 447 ntBASIC0.69□□□□□ -2.3
SPTA1P02549 AC099677.1-201ENST00000420575 175 ntBASIC0.69□□□□□ -2.3
SPTA1P02549 RABEPKP1-201ENST00000440529 1026 ntBASIC0.69□□□□□ -2.3
SPTA1P02549 PTENP1-201ENST00000447117 1215 ntBASIC0.69□□□□□ -2.3
SPTA1P02549 RPS20P10-201ENST00000451209 253 ntBASIC0.69□□□□□ -2.3
SPTA1P02549 AC117503.1-201ENST00000472241 394 ntBASIC0.69□□□□□ -2.3
SPTA1P02549 AC018437.1-201ENST00000492214 406 ntBASIC0.69□□□□□ -2.3
SPTA1P02549 AC098591.2-201ENST00000510152 315 ntBASIC0.69□□□□□ -2.3
SPTA1P02549 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC0.69□□□□□ -2.3
SPTA1P02549 MIR6864-201ENST00000617935 70 ntBASIC0.69□□□□□ -2.3
SPTA1P02549 AC010809.3-201ENST00000621310 641 ntBASIC0.69□□□□□ -2.3
SPTA1P02549 CCT4P2-201ENST00000233836 1548 ntBASIC0.69□□□□□ -2.3
SPTA1P02549 Y_RNA.571-201ENST00000384753 98 ntBASIC0.68□□□□□ -2.3
SPTA1P02549 TPMTP4-201ENST00000450749 678 ntBASIC0.68□□□□□ -2.3
SPTA1P02549 AP001960.1-201ENST00000506494 658 ntBASIC0.68□□□□□ -2.3
SPTA1P02549 AC108157.1-201ENST00000510511 539 ntBASIC0.68□□□□□ -2.3
SPTA1P02549 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.68□□□□□ -2.3
SPTA1P02549 AC025423.2-201ENST00000537570 439 ntBASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms