Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AL353193.1-201ENST00000421444 268 ntBASIC2.99□□□□□ -1.93
COL2A1P02458 AF228730.4-201ENST00000421457 183 ntBASIC2.99□□□□□ -1.93
COL2A1P02458 AL953862.1-201ENST00000423016 168 ntBASIC2.99□□□□□ -1.93
COL2A1P02458 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.99□□□□□ -1.93
COL2A1P02458 AL589872.1-201ENST00000426602 288 ntBASIC2.99□□□□□ -1.93
COL2A1P02458 AL445669.1-201ENST00000426743 755 ntBASIC2.99□□□□□ -1.93
COL2A1P02458 RPS6P12-201ENST00000432491 726 ntBASIC2.99□□□□□ -1.93
COL2A1P02458 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.99□□□□□ -1.93
COL2A1P02458 MTND6P13-201ENST00000443510 523 ntBASIC2.99□□□□□ -1.93
COL2A1P02458 MRPL50P4-201ENST00000446432 475 ntBASIC2.99□□□□□ -1.93
COL2A1P02458 MTND1P18-201ENST00000448191 573 ntBASIC2.99□□□□□ -1.93
COL2A1P02458 AC079448.1-201ENST00000449377 373 ntBASIC2.99□□□□□ -1.93
COL2A1P02458 AC015724.1-201ENST00000478577 156 ntBASIC2.99□□□□□ -1.93
COL2A1P02458 AC007182.2-201ENST00000489251 402 ntBASIC2.99□□□□□ -1.93
COL2A1P02458 RNA5SP135-201ENST00000517019 125 ntBASIC2.99□□□□□ -1.93
COL2A1P02458 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.99□□□□□ -1.93
COL2A1P02458 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.99□□□□□ -1.93
COL2A1P02458 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.99□□□□□ -1.93
COL2A1P02458 AP003122.4-201ENST00000530980 758 ntBASIC2.99□□□□□ -1.93
COL2A1P02458 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.99□□□□□ -1.93
COL2A1P02458 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.99□□□□□ -1.93
COL2A1P02458 ARL2BPP2-201ENST00000550907 489 ntBASIC2.99□□□□□ -1.93
COL2A1P02458 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.99□□□□□ -1.93
COL2A1P02458 AL359212.1-201ENST00000556608 614 ntBASIC2.99□□□□□ -1.93
COL2A1P02458 CYCSP2-201ENST00000558168 301 ntBASIC2.99□□□□□ -1.93
COL2A1P02458 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.99□□□□□ -1.93
COL2A1P02458 AP001180.3-201ENST00000582221 145 ntBASIC2.99□□□□□ -1.93
COL2A1P02458 MIR4307-201ENST00000582802 84 ntBASIC2.99□□□□□ -1.93
COL2A1P02458 AP001836.1-201ENST00000604675 523 ntBASIC2.99□□□□□ -1.93
COL2A1P02458 AL136363.1-201ENST00000605349 337 ntBASIC2.99□□□□□ -1.93
COL2A1P02458 AP004247.3-201ENST00000608682 624 ntBASIC2.99□□□□□ -1.93
COL2A1P02458 AL365204.3-201ENST00000612448 685 ntBASIC2.99□□□□□ -1.93
COL2A1P02458 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC2.99□□□□□ -1.93
COL2A1P02458 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC2.99□□□□□ -1.93
COL2A1P02458 AC145207.9-201ENST00000623802 325 ntBASIC2.99□□□□□ -1.93
COL2A1P02458 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
COL2A1P02458 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
COL2A1P02458 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
COL2A1P02458 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
COL2A1P02458 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
COL2A1P02458 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
COL2A1P02458 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
COL2A1P02458 RNU6-692P-201ENST00000384496 107 ntBASIC2.98□□□□□ -1.93
COL2A1P02458 MIR320C1-201ENST00000408566 88 ntBASIC2.98□□□□□ -1.93
COL2A1P02458 RNU4-26P-201ENST00000410270 107 ntBASIC2.98□□□□□ -1.93
COL2A1P02458 RNA5SP498-201ENST00000411342 120 ntBASIC2.98□□□□□ -1.93
COL2A1P02458 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.98□□□□□ -1.93
COL2A1P02458 AL135786.1-201ENST00000415892 214 ntBASIC2.98□□□□□ -1.93
COL2A1P02458 AC083875.1-201ENST00000419509 405 ntBASIC2.98□□□□□ -1.93
COL2A1P02458 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.98□□□□□ -1.93
COL2A1P02458 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC2.98□□□□□ -1.93
COL2A1P02458 GTF2IP20-201ENST00000431663 360 ntBASIC2.98□□□□□ -1.93
COL2A1P02458 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.98□□□□□ -1.93
COL2A1P02458 AC023347.2-201ENST00000433994 462 ntBASIC2.98□□□□□ -1.93
COL2A1P02458 AC009961.2-201ENST00000435771 251 ntBASIC2.98□□□□□ -1.93
COL2A1P02458 AL138787.1-202ENST00000437804 898 ntBASIC2.98□□□□□ -1.93
COL2A1P02458 RPL7P54-201ENST00000438336 674 ntBASIC2.98□□□□□ -1.93
COL2A1P02458 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.98□□□□□ -1.93
COL2A1P02458 RPL23AP16-201ENST00000441715 421 ntBASIC2.98□□□□□ -1.93
COL2A1P02458 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.98□□□□□ -1.93
COL2A1P02458 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.98□□□□□ -1.93
COL2A1P02458 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.98□□□□□ -1.93
COL2A1P02458 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.98□□□□□ -1.93
COL2A1P02458 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.98□□□□□ -1.93
COL2A1P02458 RNU6-1281P-201ENST00000516223 105 ntBASIC2.98□□□□□ -1.93
COL2A1P02458 AC008127.2-201ENST00000549925 1075 ntBASIC2.98□□□□□ -1.93
COL2A1P02458 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.98□□□□□ -1.93
COL2A1P02458 OR11H5P-201ENST00000554039 926 ntBASIC2.98□□□□□ -1.93
COL2A1P02458 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.98□□□□□ -1.93
COL2A1P02458 AL845331.3-202ENST00000562856 261 ntBASIC2.98□□□□□ -1.93
COL2A1P02458 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC2.98□□□□□ -1.93
COL2A1P02458 AC022432.1-201ENST00000595739 310 ntBASIC2.98□□□□□ -1.93
COL2A1P02458 AL391646.1-201ENST00000603860 190 ntBASIC2.98□□□□□ -1.93
COL2A1P02458 AL050343.2-201ENST00000607338 280 ntBASIC2.98□□□□□ -1.93
COL2A1P02458 AC107294.3-201ENST00000609211 526 ntBASIC2.98□□□□□ -1.93
COL2A1P02458 AL161734.1-201ENST00000609720 557 ntBASIC2.98□□□□□ -1.93
COL2A1P02458 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
COL2A1P02458 PISRT1-201ENST00000626175 531 ntBASIC2.98□□□□□ -1.93
COL2A1P02458 MIR6715B-201ENST00000637172 77 ntBASIC2.98□□□□□ -1.93
COL2A1P02458 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
COL2A1P02458 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
COL2A1P02458 AC009487.2-201ENST00000420969 6821 ntBASIC2.98□□□□□ -1.93
COL2A1P02458 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
COL2A1P02458 AC091564.4-201ENST00000533934 2194 ntBASIC2.98□□□□□ -1.93
COL2A1P02458 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
COL2A1P02458 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
COL2A1P02458 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
COL2A1P02458 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.97□□□□□ -1.93
COL2A1P02458 SNRPEP3-201ENST00000338402 276 ntBASIC2.97□□□□□ -1.93
COL2A1P02458 Y_RNA.67-201ENST00000362870 100 ntBASIC2.97□□□□□ -1.93
COL2A1P02458 Y_RNA.138-201ENST00000363462 102 ntBASIC2.97□□□□□ -1.93
COL2A1P02458 SUGT1P1-201ENST00000379514 476 ntBASIC2.97□□□□□ -1.93
COL2A1P02458 MIR320B1-201ENST00000390209 79 ntBASIC2.97□□□□□ -1.93
COL2A1P02458 AL590004.1-201ENST00000405321 300 ntBASIC2.97□□□□□ -1.93
COL2A1P02458 RNU6-272P-201ENST00000411028 104 ntBASIC2.97□□□□□ -1.93
COL2A1P02458 AC007390.1-201ENST00000415722 356 ntBASIC2.97□□□□□ -1.93
COL2A1P02458 MTCO3P12-201ENST00000416718 547 ntBASIC2.97□□□□□ -1.93
COL2A1P02458 AC092634.6-201ENST00000418558 192 ntBASIC2.97□□□□□ -1.93
COL2A1P02458 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.97□□□□□ -1.93
COL2A1P02458 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms