Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.13□□□□□ -2.23
TNFP01375 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.13□□□□□ -2.23
TNFP01375 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.13□□□□□ -2.23
TNFP01375 EEF1B2P4-201ENST00000551398 348 ntBASIC1.13□□□□□ -2.23
TNFP01375 AL391261.3-201ENST00000557194 520 ntBASIC1.13□□□□□ -2.23
TNFP01375 AC008269.2-201ENST00000561915 1105 ntBASIC1.13□□□□□ -2.23
TNFP01375 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.13□□□□□ -2.23
TNFP01375 WISP1-OT1-201ENST00000602893 642 ntBASIC1.13□□□□□ -2.23
TNFP01375 BNIP3P4-201ENST00000604946 565 ntBASIC1.13□□□□□ -2.23
TNFP01375 AC010738.1-201ENST00000604970 987 ntBASIC1.13□□□□□ -2.23
TNFP01375 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.13□□□□□ -2.23
TNFP01375 AC008498.1-201ENST00000613012 531 ntBASIC1.13□□□□□ -2.23
TNFP01375 AC092140.2-201ENST00000618027 521 ntBASIC1.13□□□□□ -2.23
TNFP01375 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.13□□□□□ -2.23
TNFP01375 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.13□□□□□ -2.23
TNFP01375 LINC02211-204ENST00000642024 1070 ntBASIC1.13□□□□□ -2.23
TNFP01375 RNU6-444P-201ENST00000383988 108 ntBASIC1.12□□□□□ -2.23
TNFP01375 SNORA8-201ENST00000384574 139 ntBASIC1.12□□□□□ -2.23
TNFP01375 MIR150-201ENST00000385048 84 ntBASIC1.12□□□□□ -2.23
TNFP01375 RNU6-882P-201ENST00000391025 103 ntBASIC1.12□□□□□ -2.23
TNFP01375 RNU2-49P-201ENST00000410666 184 ntBASIC1.12□□□□□ -2.23
TNFP01375 RNU6-272P-201ENST00000411028 104 ntBASIC1.12□□□□□ -2.23
TNFP01375 SNRPEP10-201ENST00000420249 274 ntBASIC1.12□□□□□ -2.23
TNFP01375 AL590383.1-201ENST00000428602 75 ntBASIC1.12□□□□□ -2.23
TNFP01375 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.12□□□□□ -2.23
TNFP01375 SNRPGP9-201ENST00000456025 225 ntBASIC1.12□□□□□ -2.23
TNFP01375 RPS29P29-201ENST00000456396 171 ntBASIC1.12□□□□□ -2.23
TNFP01375 ATP5EP1-201ENST00000510257 156 ntBASIC1.12□□□□□ -2.23
TNFP01375 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.12□□□□□ -2.23
TNFP01375 HAUS1P3-201ENST00000523909 662 ntBASIC1.12□□□□□ -2.23
TNFP01375 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.12□□□□□ -2.23
TNFP01375 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC1.12□□□□□ -2.23
TNFP01375 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.12□□□□□ -2.23
TNFP01375 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.12□□□□□ -2.23
TNFP01375 AC104763.3-201ENST00000613765 618 ntBASIC1.12□□□□□ -2.23
TNFP01375 STMN1P1-201ENST00000617809 440 ntBASIC1.12□□□□□ -2.23
TNFP01375 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.12□□□□□ -2.23
TNFP01375 AL133216.2-202ENST00000634512 349 ntBASIC1.12□□□□□ -2.23
TNFP01375 AL049641.1-201ENST00000441055 1948 ntBASIC1.12□□□□□ -2.23
TNFP01375 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
TNFP01375 RNU6-1155P-201ENST00000363554 107 ntBASIC1.11□□□□□ -2.23
TNFP01375 Y_RNA.191-201ENST00000363972 113 ntBASIC1.11□□□□□ -2.23
TNFP01375 AC244453.4-201ENST00000419150 388 ntBASIC1.11□□□□□ -2.23
TNFP01375 AC246680.2-201ENST00000422106 389 ntBASIC1.11□□□□□ -2.23
TNFP01375 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.11□□□□□ -2.23
TNFP01375 AC244035.1-201ENST00000430042 390 ntBASIC1.11□□□□□ -2.23
TNFP01375 AC024082.2-201ENST00000434771 238 ntBASIC1.11□□□□□ -2.23
TNFP01375 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC1.11□□□□□ -2.23
TNFP01375 BMI1P1-201ENST00000445879 941 ntBASIC1.11□□□□□ -2.23
TNFP01375 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.11□□□□□ -2.23
TNFP01375 RPS29P23-201ENST00000458635 123 ntBASIC1.11□□□□□ -2.23
TNFP01375 snoU109.4-201ENST00000458953 143 ntBASIC1.11□□□□□ -2.23
TNFP01375 VPS26AP1-201ENST00000483197 979 ntBASIC1.11□□□□□ -2.23
TNFP01375 HMGB1P36-201ENST00000487709 576 ntBASIC1.11□□□□□ -2.23
TNFP01375 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.11□□□□□ -2.23
TNFP01375 AF213884.2-201ENST00000510417 903 ntBASIC1.11□□□□□ -2.23
TNFP01375 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.11□□□□□ -2.23
TNFP01375 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.11□□□□□ -2.23
TNFP01375 RNA5SP137-201ENST00000516833 135 ntBASIC1.11□□□□□ -2.23
TNFP01375 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.11□□□□□ -2.23
TNFP01375 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.11□□□□□ -2.23
TNFP01375 AC107953.1-201ENST00000522216 297 ntBASIC1.11□□□□□ -2.23
TNFP01375 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.11□□□□□ -2.23
TNFP01375 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.11□□□□□ -2.23
TNFP01375 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.11□□□□□ -2.23
TNFP01375 MIR4713-201ENST00000582691 75 ntBASIC1.11□□□□□ -2.23
TNFP01375 AC105224.1-201ENST00000587055 421 ntBASIC1.11□□□□□ -2.23
TNFP01375 AC016925.2-201ENST00000605108 242 ntBASIC1.11□□□□□ -2.23
TNFP01375 PRR13P7-201ENST00000605538 430 ntBASIC1.11□□□□□ -2.23
TNFP01375 AC004775.1-201ENST00000607389 753 ntBASIC1.11□□□□□ -2.23
TNFP01375 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.11□□□□□ -2.23
TNFP01375 AC008443.7-201ENST00000622195 246 ntBASIC1.11□□□□□ -2.23
TNFP01375 AL109659.3-201ENST00000624985 950 ntBASIC1.11□□□□□ -2.23
TNFP01375 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
TNFP01375 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
TNFP01375 BTF3L4P2-201ENST00000392798 346 ntBASIC1.1□□□□□ -2.23
TNFP01375 AC016769.3-201ENST00000396562 315 ntBASIC1.1□□□□□ -2.23
TNFP01375 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.1□□□□□ -2.23
TNFP01375 RPS15AP5-201ENST00000436276 388 ntBASIC1.1□□□□□ -2.23
TNFP01375 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC1.1□□□□□ -2.23
TNFP01375 MRPS17P3-201ENST00000465453 385 ntBASIC1.1□□□□□ -2.23
TNFP01375 FAM206BP-201ENST00000510179 541 ntBASIC1.1□□□□□ -2.23
TNFP01375 Y_RNA.673-201ENST00000516306 88 ntBASIC1.1□□□□□ -2.23
TNFP01375 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.1□□□□□ -2.23
TNFP01375 AC090821.2-201ENST00000523552 176 ntBASIC1.1□□□□□ -2.23
TNFP01375 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.1□□□□□ -2.23
TNFP01375 MIR3198-2-201ENST00000577868 80 ntBASIC1.1□□□□□ -2.23
TNFP01375 AC105245.1-201ENST00000581934 244 ntBASIC1.1□□□□□ -2.23
TNFP01375 MIR4452-201ENST00000583004 71 ntBASIC1.1□□□□□ -2.23
TNFP01375 AC136443.5-201ENST00000603741 370 ntBASIC1.1□□□□□ -2.23
TNFP01375 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.1□□□□□ -2.23
TNFP01375 FRG1HP-204ENST00000617940 757 ntBASIC1.1□□□□□ -2.23
TNFP01375 AL359740.1-201ENST00000624340 592 ntBASIC1.1□□□□□ -2.23
TNFP01375 ZNF663P-202ENST00000641770 1131 ntBASIC1.1□□□□□ -2.23
TNFP01375 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
TNFP01375 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
TNFP01375 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.1□□□□□ -2.23
TNFP01375 Y_RNA.224-201ENST00000364308 111 ntBASIC1.09□□□□□ -2.23
TNFP01375 RNU6-750P-201ENST00000390946 107 ntBASIC1.09□□□□□ -2.23
TNFP01375 RNA5SP212-201ENST00000391223 107 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms