Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AC068781.1-201ENST00000488231 618 ntBASIC1.96□□□□□ -2.1
VAPBO95292 MTAPP1-201ENST00000489154 819 ntBASIC1.96□□□□□ -2.1
VAPBO95292 RPS15AP36-201ENST00000492022 382 ntBASIC1.96□□□□□ -2.1
VAPBO95292 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC1.96□□□□□ -2.1
VAPBO95292 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.96□□□□□ -2.1
VAPBO95292 RNU6-150P-201ENST00000516237 95 ntBASIC1.96□□□□□ -2.1
VAPBO95292 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
VAPBO95292 MTCO2P15-201ENST00000532655 656 ntBASIC1.96□□□□□ -2.1
VAPBO95292 MRPS36P5-201ENST00000551909 298 ntBASIC1.96□□□□□ -2.1
VAPBO95292 AL136520.1-202ENST00000555494 763 ntBASIC1.96□□□□□ -2.1
VAPBO95292 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.96□□□□□ -2.1
VAPBO95292 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.96□□□□□ -2.1
VAPBO95292 AC007229.1-201ENST00000590455 412 ntBASIC1.96□□□□□ -2.1
VAPBO95292 AC078899.2-201ENST00000595282 212 ntBASIC1.96□□□□□ -2.1
VAPBO95292 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.96□□□□□ -2.1
VAPBO95292 AL355598.1-201ENST00000604169 202 ntBASIC1.96□□□□□ -2.1
VAPBO95292 AP002802.2-201ENST00000605877 235 ntBASIC1.96□□□□□ -2.1
VAPBO95292 uc_338.14-201ENST00000613162 166 ntBASIC1.96□□□□□ -2.1
VAPBO95292 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.96□□□□□ -2.1
VAPBO95292 AL136981.2-201ENST00000617319 734 ntBASIC1.96□□□□□ -2.1
VAPBO95292 uc_338.20-201ENST00000621563 178 ntBASIC1.96□□□□□ -2.1
VAPBO95292 YWHAEP7-203ENST00000622054 312 ntBASIC1.96□□□□□ -2.1
VAPBO95292 DUXAP9-208ENST00000622815 614 ntBASIC1.96□□□□□ -2.1
VAPBO95292 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.96□□□□□ -2.1
VAPBO95292 AC092447.10-201ENST00000620607 1652 ntBASIC1.96□□□□□ -2.1
VAPBO95292 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
VAPBO95292 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
VAPBO95292 RNU6-778P-201ENST00000363269 103 ntBASIC1.95□□□□□ -2.1
VAPBO95292 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
VAPBO95292 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.95□□□□□ -2.1
VAPBO95292 CIR1P3-201ENST00000405137 479 ntBASIC1.95□□□□□ -2.1
VAPBO95292 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.95□□□□□ -2.1
VAPBO95292 TIMM9P2-201ENST00000419324 266 ntBASIC1.95□□□□□ -2.1
VAPBO95292 AL139413.1-201ENST00000421309 217 ntBASIC1.95□□□□□ -2.1
VAPBO95292 AC003685.2-201ENST00000422795 395 ntBASIC1.95□□□□□ -2.1
VAPBO95292 SKA2P1-201ENST00000425592 390 ntBASIC1.95□□□□□ -2.1
VAPBO95292 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.95□□□□□ -2.1
VAPBO95292 MTND1P28-201ENST00000435623 950 ntBASIC1.95□□□□□ -2.1
VAPBO95292 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.95□□□□□ -2.1
VAPBO95292 COX7BP2-201ENST00000437976 242 ntBASIC1.95□□□□□ -2.1
VAPBO95292 AL161651.1-201ENST00000440882 223 ntBASIC1.95□□□□□ -2.1
VAPBO95292 MTND5P14-201ENST00000441481 1267 ntBASIC1.95□□□□□ -2.1
VAPBO95292 MTCO3P45-201ENST00000443036 613 ntBASIC1.95□□□□□ -2.1
VAPBO95292 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.95□□□□□ -2.1
VAPBO95292 CECR9-201ENST00000453421 199 ntBASIC1.95□□□□□ -2.1
VAPBO95292 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.95□□□□□ -2.1
VAPBO95292 AC022493.1-201ENST00000492984 337 ntBASIC1.95□□□□□ -2.1
VAPBO95292 AC106872.3-201ENST00000495104 446 ntBASIC1.95□□□□□ -2.1
VAPBO95292 AC026801.1-201ENST00000497178 464 ntBASIC1.95□□□□□ -2.1
VAPBO95292 ANXA2P1-201ENST00000505539 926 ntBASIC1.95□□□□□ -2.1
VAPBO95292 RNU6-927P-201ENST00000516199 100 ntBASIC1.95□□□□□ -2.1
VAPBO95292 RNA5SP165-201ENST00000517142 115 ntBASIC1.95□□□□□ -2.1
VAPBO95292 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.95□□□□□ -2.1
VAPBO95292 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.95□□□□□ -2.1
VAPBO95292 FAM92A1P1-201ENST00000528023 890 ntBASIC1.95□□□□□ -2.1
VAPBO95292 AC118273.2-201ENST00000532092 465 ntBASIC1.95□□□□□ -2.1
VAPBO95292 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.95□□□□□ -2.1
VAPBO95292 AL512347.1-201ENST00000566420 503 ntBASIC1.95□□□□□ -2.1
VAPBO95292 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.95□□□□□ -2.1
VAPBO95292 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.95□□□□□ -2.1
VAPBO95292 AC008507.2-201ENST00000588402 1176 ntBASIC1.95□□□□□ -2.1
VAPBO95292 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.95□□□□□ -2.1
VAPBO95292 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.95□□□□□ -2.1
VAPBO95292 AC068276.1-201ENST00000605793 379 ntBASIC1.95□□□□□ -2.1
VAPBO95292 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.95□□□□□ -2.1
VAPBO95292 AC084824.5-201ENST00000612009 413 ntBASIC1.95□□□□□ -2.1
VAPBO95292 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.95□□□□□ -2.1
VAPBO95292 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.95□□□□□ -2.1
VAPBO95292 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.95□□□□□ -2.1
VAPBO95292 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
VAPBO95292 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
VAPBO95292 SNORA63.3-201ENST00000362682 132 ntBASIC1.94□□□□□ -2.1
VAPBO95292 MIR17-201ENST00000385012 84 ntBASIC1.94□□□□□ -2.1
VAPBO95292 AL590084.1-201ENST00000407885 387 ntBASIC1.94□□□□□ -2.1
VAPBO95292 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.94□□□□□ -2.1
VAPBO95292 RNU2-20P-201ENST00000410425 191 ntBASIC1.94□□□□□ -2.1
VAPBO95292 RNU2-63P-201ENST00000410792 194 ntBASIC1.94□□□□□ -2.1
VAPBO95292 RNU2-72P-201ENST00000411175 163 ntBASIC1.94□□□□□ -2.1
VAPBO95292 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.94□□□□□ -2.1
VAPBO95292 AL356379.1-201ENST00000414105 126 ntBASIC1.94□□□□□ -2.1
VAPBO95292 AL035407.1-201ENST00000429211 571 ntBASIC1.94□□□□□ -2.1
VAPBO95292 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.94□□□□□ -2.1
VAPBO95292 AC010153.1-201ENST00000432862 727 ntBASIC1.94□□□□□ -2.1
VAPBO95292 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC1.94□□□□□ -2.1
VAPBO95292 AC016691.1-201ENST00000441321 413 ntBASIC1.94□□□□□ -2.1
VAPBO95292 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.94□□□□□ -2.1
VAPBO95292 MTND1P31-201ENST00000449206 961 ntBASIC1.94□□□□□ -2.1
VAPBO95292 AC008481.1-201ENST00000463278 396 ntBASIC1.94□□□□□ -2.1
VAPBO95292 RN7SL274P-201ENST00000492268 272 ntBASIC1.94□□□□□ -2.1
VAPBO95292 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
VAPBO95292 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.94□□□□□ -2.1
VAPBO95292 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.94□□□□□ -2.1
VAPBO95292 AC008526.1-201ENST00000509149 338 ntBASIC1.94□□□□□ -2.1
VAPBO95292 AC010486.1-201ENST00000511793 424 ntBASIC1.94□□□□□ -2.1
VAPBO95292 AC024589.1-201ENST00000512207 263 ntBASIC1.94□□□□□ -2.1
VAPBO95292 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.94□□□□□ -2.1
VAPBO95292 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.94□□□□□ -2.1
VAPBO95292 MIR514B-201ENST00000516774 80 ntBASIC1.94□□□□□ -2.1
VAPBO95292 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.94□□□□□ -2.1
VAPBO95292 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms