Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AP000776.1-201ENST00000530032 1663 ntBASIC1.85□□□□□ -2.11
UPK1BO75841 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.85□□□□□ -2.11
UPK1BO75841 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
UPK1BO75841 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.85□□□□□ -2.11
UPK1BO75841 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.84□□□□□ -2.11
UPK1BO75841 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
UPK1BO75841 RNA5SP374-201ENST00000362939 125 ntBASIC1.84□□□□□ -2.11
UPK1BO75841 SNORA4.1-201ENST00000364263 144 ntBASIC1.84□□□□□ -2.11
UPK1BO75841 RNU4-68P-201ENST00000364314 141 ntBASIC1.84□□□□□ -2.11
UPK1BO75841 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
UPK1BO75841 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.84□□□□□ -2.11
UPK1BO75841 RNU6-19P-201ENST00000384718 107 ntBASIC1.84□□□□□ -2.11
UPK1BO75841 MIR147B-201ENST00000390185 80 ntBASIC1.84□□□□□ -2.11
UPK1BO75841 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
UPK1BO75841 NDUFS5P1-201ENST00000405668 289 ntBASIC1.84□□□□□ -2.11
UPK1BO75841 NPM1P11-201ENST00000417106 855 ntBASIC1.84□□□□□ -2.11
UPK1BO75841 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.84□□□□□ -2.11
UPK1BO75841 EIF4EP4-201ENST00000424916 578 ntBASIC1.84□□□□□ -2.11
UPK1BO75841 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
UPK1BO75841 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.84□□□□□ -2.11
UPK1BO75841 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.84□□□□□ -2.11
UPK1BO75841 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.84□□□□□ -2.11
UPK1BO75841 AC004383.1-201ENST00000438135 289 ntBASIC1.84□□□□□ -2.11
UPK1BO75841 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.84□□□□□ -2.11
UPK1BO75841 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.84□□□□□ -2.11
UPK1BO75841 AL118520.1-201ENST00000450770 291 ntBASIC1.84□□□□□ -2.11
UPK1BO75841 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.84□□□□□ -2.11
UPK1BO75841 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
UPK1BO75841 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.84□□□□□ -2.11
UPK1BO75841 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.84□□□□□ -2.11
UPK1BO75841 RPL7P18-201ENST00000478965 734 ntBASIC1.84□□□□□ -2.11
UPK1BO75841 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.84□□□□□ -2.11
UPK1BO75841 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.84□□□□□ -2.11
UPK1BO75841 RPF2P2-201ENST00000504693 896 ntBASIC1.84□□□□□ -2.11
UPK1BO75841 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
UPK1BO75841 AC118465.1-201ENST00000513820 1271 ntBASIC1.84□□□□□ -2.11
UPK1BO75841 RNU7-193P-201ENST00000516723 65 ntBASIC1.84□□□□□ -2.11
UPK1BO75841 RNU6-703P-201ENST00000516946 107 ntBASIC1.84□□□□□ -2.11
UPK1BO75841 SNORD19.2-201ENST00000516978 73 ntBASIC1.84□□□□□ -2.11
UPK1BO75841 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.84□□□□□ -2.11
UPK1BO75841 AC021269.2-201ENST00000532318 330 ntBASIC1.84□□□□□ -2.11
UPK1BO75841 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.84□□□□□ -2.11
UPK1BO75841 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.84□□□□□ -2.11
UPK1BO75841 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.84□□□□□ -2.11
UPK1BO75841 AC091057.3-201ENST00000602684 733 ntBASIC1.84□□□□□ -2.11
UPK1BO75841 AL355598.1-201ENST00000604169 202 ntBASIC1.84□□□□□ -2.11
UPK1BO75841 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
UPK1BO75841 AC009159.1-201ENST00000618386 642 ntBASIC1.84□□□□□ -2.11
UPK1BO75841 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.84□□□□□ -2.11
UPK1BO75841 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
UPK1BO75841 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.83□□□□□ -2.12
UPK1BO75841 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.83□□□□□ -2.12
UPK1BO75841 AC104454.1-201ENST00000421341 1401 ntBASIC1.83□□□□□ -2.12
UPK1BO75841 NACAP2-201ENST00000318548 624 ntBASIC1.83□□□□□ -2.12
UPK1BO75841 5S_rRNA.1-201ENST00000364415 116 ntBASIC1.83□□□□□ -2.12
UPK1BO75841 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC1.83□□□□□ -2.12
UPK1BO75841 VPS26BP1-201ENST00000417155 755 ntBASIC1.83□□□□□ -2.12
UPK1BO75841 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.83□□□□□ -2.12
UPK1BO75841 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.83□□□□□ -2.12
UPK1BO75841 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.83□□□□□ -2.12
UPK1BO75841 AL451062.2-201ENST00000427515 271 ntBASIC1.83□□□□□ -2.12
UPK1BO75841 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.83□□□□□ -2.12
UPK1BO75841 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.83□□□□□ -2.12
UPK1BO75841 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.83□□□□□ -2.12
UPK1BO75841 AC092001.1-201ENST00000453012 261 ntBASIC1.83□□□□□ -2.12
UPK1BO75841 MTATP6P14-201ENST00000455189 673 ntBASIC1.83□□□□□ -2.12
UPK1BO75841 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.83□□□□□ -2.12
UPK1BO75841 AL358832.1-201ENST00000497800 389 ntBASIC1.83□□□□□ -2.12
UPK1BO75841 AC074250.1-201ENST00000511117 192 ntBASIC1.83□□□□□ -2.12
UPK1BO75841 MIR892C-201ENST00000516410 77 ntBASIC1.83□□□□□ -2.12
UPK1BO75841 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.83□□□□□ -2.12
UPK1BO75841 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.83□□□□□ -2.12
UPK1BO75841 AP000907.2-201ENST00000530827 353 ntBASIC1.83□□□□□ -2.12
UPK1BO75841 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.83□□□□□ -2.12
UPK1BO75841 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.83□□□□□ -2.12
UPK1BO75841 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.83□□□□□ -2.12
UPK1BO75841 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.83□□□□□ -2.12
UPK1BO75841 AC112220.3-201ENST00000605502 502 ntBASIC1.83□□□□□ -2.12
UPK1BO75841 AL157392.4-201ENST00000609756 345 ntBASIC1.83□□□□□ -2.12
UPK1BO75841 AC103710.1-201ENST00000610003 901 ntBASIC1.83□□□□□ -2.12
UPK1BO75841 AL109620.1-201ENST00000618738 1197 ntBASIC1.83□□□□□ -2.12
UPK1BO75841 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
UPK1BO75841 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
UPK1BO75841 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.83□□□□□ -2.12
UPK1BO75841 AL354685.2-201ENST00000448218 1447 ntBASIC1.83□□□□□ -2.12
UPK1BO75841 AC004944.1-201ENST00000517807 3059 ntBASIC1.82□□□□□ -2.12
UPK1BO75841 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.82□□□□□ -2.12
UPK1BO75841 AL359854.1-201ENST00000614203 1594 ntBASIC1.82□□□□□ -2.12
UPK1BO75841 FAM133CP-201ENST00000332869 704 ntBASIC1.82□□□□□ -2.12
UPK1BO75841 SNORA16B-201ENST00000364674 135 ntBASIC1.82□□□□□ -2.12
UPK1BO75841 RNU6-723P-201ENST00000383973 107 ntBASIC1.82□□□□□ -2.12
UPK1BO75841 RNU6-701P-201ENST00000384059 107 ntBASIC1.82□□□□□ -2.12
UPK1BO75841 RNVU1-14-201ENST00000384770 164 ntBASIC1.82□□□□□ -2.12
UPK1BO75841 SNORD23.1-201ENST00000408212 104 ntBASIC1.82□□□□□ -2.12
UPK1BO75841 PIGPP2-201ENST00000411569 458 ntBASIC1.82□□□□□ -2.12
UPK1BO75841 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.82□□□□□ -2.12
UPK1BO75841 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.82□□□□□ -2.12
UPK1BO75841 AC003685.2-201ENST00000422795 395 ntBASIC1.82□□□□□ -2.12
UPK1BO75841 PTGES3P4-201ENST00000426243 356 ntBASIC1.82□□□□□ -2.12
UPK1BO75841 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 162 ms