Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.23□□□□□ -2.05
NPHP4O75161 AC068135.2-201ENST00000569293 1028 ntBASIC2.23□□□□□ -2.05
NPHP4O75161 MIR4637-201ENST00000582405 84 ntBASIC2.23□□□□□ -2.05
NPHP4O75161 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.23□□□□□ -2.05
NPHP4O75161 AC008507.2-201ENST00000588402 1176 ntBASIC2.23□□□□□ -2.05
NPHP4O75161 AC005332.6-201ENST00000613178 446 ntBASIC2.23□□□□□ -2.05
NPHP4O75161 AL590099.1-201ENST00000615276 138 ntBASIC2.23□□□□□ -2.05
NPHP4O75161 AC025588.4-201ENST00000615802 908 ntBASIC2.23□□□□□ -2.05
NPHP4O75161 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
NPHP4O75161 AL512427.1-201ENST00000618593 349 ntBASIC2.23□□□□□ -2.05
NPHP4O75161 AC011330.2-201ENST00000621680 635 ntBASIC2.23□□□□□ -2.05
NPHP4O75161 AC120349.2-201ENST00000625002 298 ntBASIC2.23□□□□□ -2.05
NPHP4O75161 OR5H6-203ENST00000642105 978 ntBASIC2.23□□□□□ -2.05
NPHP4O75161 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.23□□□□□ -2.05
NPHP4O75161 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.22□□□□□ -2.05
NPHP4O75161 AC107982.1-201ENST00000507171 1300 ntBASIC2.22□□□□□ -2.05
NPHP4O75161 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
NPHP4O75161 AC138915.1-201ENST00000565427 1685 ntBASIC2.22□□□□□ -2.05
NPHP4O75161 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.22□□□□□ -2.05
NPHP4O75161 RNU4-52P-201ENST00000384209 138 ntBASIC2.22□□□□□ -2.05
NPHP4O75161 MIR517C-201ENST00000385103 95 ntBASIC2.22□□□□□ -2.05
NPHP4O75161 MTATP6P27-201ENST00000416987 621 ntBASIC2.22□□□□□ -2.05
NPHP4O75161 AL139421.1-201ENST00000423010 169 ntBASIC2.22□□□□□ -2.05
NPHP4O75161 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC2.22□□□□□ -2.05
NPHP4O75161 MTCYBP42-201ENST00000444653 1130 ntBASIC2.22□□□□□ -2.05
NPHP4O75161 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.22□□□□□ -2.05
NPHP4O75161 ATP5J2P3-201ENST00000451550 258 ntBASIC2.22□□□□□ -2.05
NPHP4O75161 AC092155.2-201ENST00000454675 477 ntBASIC2.22□□□□□ -2.05
NPHP4O75161 RPL12P25-201ENST00000455592 494 ntBASIC2.22□□□□□ -2.05
NPHP4O75161 AL135752.1-201ENST00000479477 471 ntBASIC2.22□□□□□ -2.05
NPHP4O75161 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC2.22□□□□□ -2.05
NPHP4O75161 SNORA31.22-201ENST00000517204 135 ntBASIC2.22□□□□□ -2.05
NPHP4O75161 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.22□□□□□ -2.05
NPHP4O75161 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.22□□□□□ -2.05
NPHP4O75161 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.22□□□□□ -2.05
NPHP4O75161 AC013553.2-201ENST00000604244 589 ntBASIC2.22□□□□□ -2.05
NPHP4O75161 AC140725.3-201ENST00000616193 880 ntBASIC2.22□□□□□ -2.05
NPHP4O75161 AC008443.7-201ENST00000622195 246 ntBASIC2.22□□□□□ -2.05
NPHP4O75161 DUXAP9-208ENST00000622815 614 ntBASIC2.22□□□□□ -2.05
NPHP4O75161 AC131280.1-202ENST00000624067 4211 ntBASIC2.22□□□□□ -2.05
NPHP4O75161 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
NPHP4O75161 RNU5A-1-201ENST00000362698 116 ntBASIC2.21□□□□□ -2.06
NPHP4O75161 RNA5SP139-201ENST00000364340 117 ntBASIC2.21□□□□□ -2.06
NPHP4O75161 MIR506-201ENST00000384998 124 ntBASIC2.21□□□□□ -2.06
NPHP4O75161 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.21□□□□□ -2.06
NPHP4O75161 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.21□□□□□ -2.06
NPHP4O75161 AC090774.1-201ENST00000435925 246 ntBASIC2.21□□□□□ -2.06
NPHP4O75161 PTGES3P1-201ENST00000439531 483 ntBASIC2.21□□□□□ -2.06
NPHP4O75161 ARF4P4-201ENST00000439608 520 ntBASIC2.21□□□□□ -2.06
NPHP4O75161 AL121871.1-201ENST00000443413 436 ntBASIC2.21□□□□□ -2.06
NPHP4O75161 MTCYBP11-201ENST00000447254 1109 ntBASIC2.21□□□□□ -2.06
NPHP4O75161 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.21□□□□□ -2.06
NPHP4O75161 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
NPHP4O75161 RPPH1-2P-201ENST00000516688 293 ntBASIC2.21□□□□□ -2.06
NPHP4O75161 AC022861.1-201ENST00000522981 663 ntBASIC2.21□□□□□ -2.06
NPHP4O75161 AC087894.1-201ENST00000538359 518 ntBASIC2.21□□□□□ -2.06
NPHP4O75161 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.21□□□□□ -2.06
NPHP4O75161 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.21□□□□□ -2.06
NPHP4O75161 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.21□□□□□ -2.06
NPHP4O75161 AC253576.2-201ENST00000618815 580 ntBASIC2.21□□□□□ -2.06
NPHP4O75161 MIR6515-201ENST00000619843 57 ntBASIC2.21□□□□□ -2.06
NPHP4O75161 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
NPHP4O75161 AC093536.2-201ENST00000565257 1406 ntBASIC2.2□□□□□ -2.06
NPHP4O75161 RNU1-93P-201ENST00000364704 169 ntBASIC2.2□□□□□ -2.06
NPHP4O75161 RPL23AP29-201ENST00000397284 453 ntBASIC2.2□□□□□ -2.06
NPHP4O75161 SUMO2P12-201ENST00000405924 140 ntBASIC2.2□□□□□ -2.06
NPHP4O75161 AL592310.1-201ENST00000414330 671 ntBASIC2.2□□□□□ -2.06
NPHP4O75161 AC099548.1-201ENST00000421443 426 ntBASIC2.2□□□□□ -2.06
NPHP4O75161 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.2□□□□□ -2.06
NPHP4O75161 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.2□□□□□ -2.06
NPHP4O75161 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.2□□□□□ -2.06
NPHP4O75161 DDX3P2-201ENST00000446138 111 ntBASIC2.2□□□□□ -2.06
NPHP4O75161 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.2□□□□□ -2.06
NPHP4O75161 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
NPHP4O75161 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.2□□□□□ -2.06
NPHP4O75161 RPS27P26-201ENST00000494583 239 ntBASIC2.2□□□□□ -2.06
NPHP4O75161 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.2□□□□□ -2.06
NPHP4O75161 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
NPHP4O75161 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.2□□□□□ -2.06
NPHP4O75161 AC087808.1-201ENST00000520501 361 ntBASIC2.2□□□□□ -2.06
NPHP4O75161 AP005660.1-201ENST00000522972 293 ntBASIC2.2□□□□□ -2.06
NPHP4O75161 HSPE1P3-201ENST00000559254 309 ntBASIC2.2□□□□□ -2.06
NPHP4O75161 MIR3921-201ENST00000577308 85 ntBASIC2.2□□□□□ -2.06
NPHP4O75161 MIR3618-201ENST00000580330 88 ntBASIC2.2□□□□□ -2.06
NPHP4O75161 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.2□□□□□ -2.06
NPHP4O75161 AP001429.1-201ENST00000602568 530 ntBASIC2.2□□□□□ -2.06
NPHP4O75161 AL390208.1-201ENST00000605885 644 ntBASIC2.2□□□□□ -2.06
NPHP4O75161 AC004067.1-201ENST00000608733 700 ntBASIC2.2□□□□□ -2.06
NPHP4O75161 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.2□□□□□ -2.06
NPHP4O75161 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.2□□□□□ -2.06
NPHP4O75161 TPTE2P4-201ENST00000258589 1605 ntBASIC2.2□□□□□ -2.06
NPHP4O75161 AC087359.1-201ENST00000508335 1740 ntBASIC2.2□□□□□ -2.06
NPHP4O75161 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
NPHP4O75161 RNA5SP489-201ENST00000410986 109 ntBASIC2.19□□□□□ -2.06
NPHP4O75161 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.19□□□□□ -2.06
NPHP4O75161 TRGVB-201ENST00000453257 471 ntBASIC2.19□□□□□ -2.06
NPHP4O75161 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.19□□□□□ -2.06
NPHP4O75161 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.19□□□□□ -2.06
NPHP4O75161 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.19□□□□□ -2.06
NPHP4O75161 AC104072.1-201ENST00000568817 668 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms