Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 FABP5P14-201ENST00000437273 393 ntBASIC0.87□□□□□ -2.27
SSSCA1O60232 THAP5P1-201ENST00000439089 262 ntBASIC0.87□□□□□ -2.27
SSSCA1O60232 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.87□□□□□ -2.27
SSSCA1O60232 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC0.87□□□□□ -2.27
SSSCA1O60232 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC0.87□□□□□ -2.27
SSSCA1O60232 AC139453.3-201ENST00000493276 369 ntBASIC0.87□□□□□ -2.27
SSSCA1O60232 AC093767.1-201ENST00000504523 156 ntBASIC0.87□□□□□ -2.27
SSSCA1O60232 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
SSSCA1O60232 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.87□□□□□ -2.27
SSSCA1O60232 MRPS33P3-201ENST00000513456 322 ntBASIC0.87□□□□□ -2.27
SSSCA1O60232 AC124947.2-202ENST00000552735 133 ntBASIC0.87□□□□□ -2.27
SSSCA1O60232 AC019288.1-201ENST00000557918 224 ntBASIC0.87□□□□□ -2.27
SSSCA1O60232 MIR4421-201ENST00000578133 69 ntBASIC0.87□□□□□ -2.27
SSSCA1O60232 AL391813.1-201ENST00000603098 260 ntBASIC0.87□□□□□ -2.27
SSSCA1O60232 AC016542.1-201ENST00000608259 493 ntBASIC0.87□□□□□ -2.27
SSSCA1O60232 AC009974.1-201ENST00000608881 455 ntBASIC0.87□□□□□ -2.27
SSSCA1O60232 AC024581.2-201ENST00000619986 252 ntBASIC0.87□□□□□ -2.27
SSSCA1O60232 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.87□□□□□ -2.27
SSSCA1O60232 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
SSSCA1O60232 Y_RNA.67-201ENST00000362870 100 ntBASIC0.86□□□□□ -2.27
SSSCA1O60232 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.86□□□□□ -2.27
SSSCA1O60232 SNORA22-201ENST00000383907 134 ntBASIC0.86□□□□□ -2.27
SSSCA1O60232 Y_RNA.500-201ENST00000384466 111 ntBASIC0.86□□□□□ -2.27
SSSCA1O60232 SNORA22C-201ENST00000384614 134 ntBASIC0.86□□□□□ -2.27
SSSCA1O60232 SNORA40.19-201ENST00000390846 128 ntBASIC0.86□□□□□ -2.27
SSSCA1O60232 AL021407.1-201ENST00000404531 386 ntBASIC0.86□□□□□ -2.27
SSSCA1O60232 EIF4EP2-201ENST00000422816 654 ntBASIC0.86□□□□□ -2.27
SSSCA1O60232 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.86□□□□□ -2.27
SSSCA1O60232 RSU1P2-202ENST00000437884 485 ntBASIC0.86□□□□□ -2.27
SSSCA1O60232 Z82210.1-201ENST00000440037 231 ntBASIC0.86□□□□□ -2.27
SSSCA1O60232 RPL23AP76-201ENST00000441860 458 ntBASIC0.86□□□□□ -2.27
SSSCA1O60232 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC0.86□□□□□ -2.27
SSSCA1O60232 MTND1P33-201ENST00000446251 917 ntBASIC0.86□□□□□ -2.27
SSSCA1O60232 AC079448.1-201ENST00000449377 373 ntBASIC0.86□□□□□ -2.27
SSSCA1O60232 AC117503.1-201ENST00000472241 394 ntBASIC0.86□□□□□ -2.27
SSSCA1O60232 AC132942.1-201ENST00000486753 483 ntBASIC0.86□□□□□ -2.27
SSSCA1O60232 AC093852.1-201ENST00000503587 266 ntBASIC0.86□□□□□ -2.27
SSSCA1O60232 AC117522.2-201ENST00000510049 657 ntBASIC0.86□□□□□ -2.27
SSSCA1O60232 AC119751.5-201ENST00000514077 770 ntBASIC0.86□□□□□ -2.27
SSSCA1O60232 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.86□□□□□ -2.27
SSSCA1O60232 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC0.86□□□□□ -2.27
SSSCA1O60232 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC0.86□□□□□ -2.27
SSSCA1O60232 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC0.86□□□□□ -2.27
SSSCA1O60232 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC0.86□□□□□ -2.27
SSSCA1O60232 AC025918.2-201ENST00000558683 763 ntBASIC0.86□□□□□ -2.27
SSSCA1O60232 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC0.86□□□□□ -2.27
SSSCA1O60232 AL356432.3-201ENST00000568952 465 ntBASIC0.86□□□□□ -2.27
SSSCA1O60232 AC007151.1-201ENST00000572774 483 ntBASIC0.86□□□□□ -2.27
SSSCA1O60232 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.86□□□□□ -2.27
SSSCA1O60232 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC0.86□□□□□ -2.27
SSSCA1O60232 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC0.86□□□□□ -2.27
SSSCA1O60232 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.86□□□□□ -2.27
SSSCA1O60232 AL118508.4-201ENST00000624142 1176 ntBASIC0.86□□□□□ -2.27
SSSCA1O60232 AC092608.3-201ENST00000625017 386 ntBASIC0.86□□□□□ -2.27
SSSCA1O60232 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC0.86□□□□□ -2.27
SSSCA1O60232 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC0.86□□□□□ -2.27
SSSCA1O60232 SNORA62.1-201ENST00000364287 154 ntBASIC0.85□□□□□ -2.27
SSSCA1O60232 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.85□□□□□ -2.27
SSSCA1O60232 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC0.85□□□□□ -2.27
SSSCA1O60232 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC0.85□□□□□ -2.27
SSSCA1O60232 HMGB1P27-201ENST00000431429 603 ntBASIC0.85□□□□□ -2.27
SSSCA1O60232 USP9YP35-201ENST00000435696 412 ntBASIC0.85□□□□□ -2.27
SSSCA1O60232 AL590365.1-201ENST00000450788 243 ntBASIC0.85□□□□□ -2.27
SSSCA1O60232 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.85□□□□□ -2.27
SSSCA1O60232 APOA2-205ENST00000468465 421 ntTSL 2 BASIC0.85□□□□□ -2.27
SSSCA1O60232 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC0.85□□□□□ -2.27
SSSCA1O60232 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.85□□□□□ -2.27
SSSCA1O60232 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC0.85□□□□□ -2.27
SSSCA1O60232 AC084364.2-201ENST00000546924 395 ntBASIC0.85□□□□□ -2.27
SSSCA1O60232 RPL21P5-201ENST00000554662 472 ntBASIC0.85□□□□□ -2.27
SSSCA1O60232 AL670379.6-201ENST00000603753 252 ntBASIC0.85□□□□□ -2.27
SSSCA1O60232 AL670379.11-201ENST00000604059 253 ntBASIC0.85□□□□□ -2.27
SSSCA1O60232 AC104763.2-201ENST00000604179 382 ntBASIC0.85□□□□□ -2.27
SSSCA1O60232 AC025811.1-201ENST00000604312 472 ntBASIC0.85□□□□□ -2.27
SSSCA1O60232 AL670379.10-201ENST00000604330 253 ntBASIC0.85□□□□□ -2.27
SSSCA1O60232 AC008162.1-201ENST00000604718 254 ntBASIC0.85□□□□□ -2.27
SSSCA1O60232 AL670379.1-201ENST00000604752 252 ntBASIC0.85□□□□□ -2.27
SSSCA1O60232 AL670379.2-201ENST00000604983 252 ntBASIC0.85□□□□□ -2.27
SSSCA1O60232 AL670379.5-201ENST00000605253 252 ntBASIC0.85□□□□□ -2.27
SSSCA1O60232 AL670379.4-201ENST00000605279 254 ntBASIC0.85□□□□□ -2.27
SSSCA1O60232 AL670379.12-201ENST00000605291 253 ntBASIC0.85□□□□□ -2.27
SSSCA1O60232 AL670379.8-201ENST00000605353 252 ntBASIC0.85□□□□□ -2.27
SSSCA1O60232 AL670379.9-201ENST00000605428 253 ntBASIC0.85□□□□□ -2.27
SSSCA1O60232 BX322635.1-201ENST00000605804 496 ntBASIC0.85□□□□□ -2.27
SSSCA1O60232 AL670379.7-201ENST00000605823 252 ntBASIC0.85□□□□□ -2.27
SSSCA1O60232 AC103810.9-201ENST00000606688 112 ntBASIC0.85□□□□□ -2.27
SSSCA1O60232 AP000238.1-201ENST00000608759 426 ntBASIC0.85□□□□□ -2.27
SSSCA1O60232 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC0.85□□□□□ -2.27
SSSCA1O60232 AC092140.2-201ENST00000618027 521 ntBASIC0.85□□□□□ -2.27
SSSCA1O60232 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC0.85□□□□□ -2.27
SSSCA1O60232 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC0.85□□□□□ -2.27
SSSCA1O60232 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.84□□□□□ -2.27
SSSCA1O60232 RNU6-486P-201ENST00000363116 107 ntBASIC0.84□□□□□ -2.27
SSSCA1O60232 RNU6-251P-201ENST00000363235 104 ntBASIC0.84□□□□□ -2.27
SSSCA1O60232 RNU6-884P-201ENST00000363889 107 ntBASIC0.84□□□□□ -2.27
SSSCA1O60232 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC0.84□□□□□ -2.27
SSSCA1O60232 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC0.84□□□□□ -2.27
SSSCA1O60232 MIR1289-2-201ENST00000408360 111 ntBASIC0.84□□□□□ -2.27
SSSCA1O60232 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.84□□□□□ -2.27
SSSCA1O60232 CR769776.1-201ENST00000441254 787 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms