Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.82□□□□□ -2.12
SGCEO43556 MTCO2P15-201ENST00000532655 656 ntBASIC1.82□□□□□ -2.12
SGCEO43556 CBX3P7-201ENST00000532876 502 ntBASIC1.82□□□□□ -2.12
SGCEO43556 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.82□□□□□ -2.12
SGCEO43556 MIR3126-201ENST00000577443 74 ntBASIC1.82□□□□□ -2.12
SGCEO43556 AC022662.1-201ENST00000580252 331 ntBASIC1.82□□□□□ -2.12
SGCEO43556 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.82□□□□□ -2.12
SGCEO43556 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.82□□□□□ -2.12
SGCEO43556 AC091152.3-201ENST00000604227 325 ntBASIC1.82□□□□□ -2.12
SGCEO43556 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.82□□□□□ -2.12
SGCEO43556 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
SGCEO43556 AC107075.1-201ENST00000613695 314 ntBASIC1.82□□□□□ -2.12
SGCEO43556 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.82□□□□□ -2.12
SGCEO43556 AC064859.1-201ENST00000624741 174 ntBASIC1.82□□□□□ -2.12
SGCEO43556 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.82□□□□□ -2.12
SGCEO43556 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
SGCEO43556 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
SGCEO43556 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
SGCEO43556 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SGCEO43556 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.82□□□□□ -2.12
SGCEO43556 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
SGCEO43556 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
SGCEO43556 RNU6-19P-201ENST00000384718 107 ntBASIC1.81□□□□□ -2.12
SGCEO43556 MIR23A-201ENST00000385245 73 ntBASIC1.81□□□□□ -2.12
SGCEO43556 MIR147B-201ENST00000390185 80 ntBASIC1.81□□□□□ -2.12
SGCEO43556 MIR676-201ENST00000390702 67 ntBASIC1.81□□□□□ -2.12
SGCEO43556 AC068533.2-201ENST00000411872 306 ntBASIC1.81□□□□□ -2.12
SGCEO43556 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.81□□□□□ -2.12
SGCEO43556 UBE2FP1-201ENST00000416536 447 ntBASIC1.81□□□□□ -2.12
SGCEO43556 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.81□□□□□ -2.12
SGCEO43556 Z98742.3-201ENST00000418637 326 ntBASIC1.81□□□□□ -2.12
SGCEO43556 BTF3L4P3-201ENST00000418879 476 ntBASIC1.81□□□□□ -2.12
SGCEO43556 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.81□□□□□ -2.12
SGCEO43556 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.81□□□□□ -2.12
SGCEO43556 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.81□□□□□ -2.12
SGCEO43556 C1DP1-201ENST00000426049 402 ntBASIC1.81□□□□□ -2.12
SGCEO43556 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
SGCEO43556 COX7BP2-201ENST00000437976 242 ntBASIC1.81□□□□□ -2.12
SGCEO43556 MTCO3P45-201ENST00000443036 613 ntBASIC1.81□□□□□ -2.12
SGCEO43556 AL021397.1-201ENST00000451806 248 ntBASIC1.81□□□□□ -2.12
SGCEO43556 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.81□□□□□ -2.12
SGCEO43556 RPL21P134-201ENST00000453468 483 ntBASIC1.81□□□□□ -2.12
SGCEO43556 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC1.81□□□□□ -2.12
SGCEO43556 AC107032.1-201ENST00000485945 480 ntBASIC1.81□□□□□ -2.12
SGCEO43556 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.81□□□□□ -2.12
SGCEO43556 RNA5SP165-201ENST00000517142 115 ntBASIC1.81□□□□□ -2.12
SGCEO43556 AC006199.1-201ENST00000548728 219 ntBASIC1.81□□□□□ -2.12
SGCEO43556 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.81□□□□□ -2.12
SGCEO43556 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.81□□□□□ -2.12
SGCEO43556 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.81□□□□□ -2.12
SGCEO43556 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.81□□□□□ -2.12
SGCEO43556 AC090897.2-201ENST00000581715 130 ntBASIC1.81□□□□□ -2.12
SGCEO43556 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.81□□□□□ -2.12
SGCEO43556 AC009314.1-201ENST00000603871 304 ntBASIC1.81□□□□□ -2.12
SGCEO43556 DUSP12P1-201ENST00000612874 516 ntBASIC1.81□□□□□ -2.12
SGCEO43556 AC007490.1-201ENST00000624321 703 ntBASIC1.81□□□□□ -2.12
SGCEO43556 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SGCEO43556 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
SGCEO43556 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SGCEO43556 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
SGCEO43556 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.8□□□□□ -2.12
SGCEO43556 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
SGCEO43556 RN7SKP32-201ENST00000410167 303 ntBASIC1.8□□□□□ -2.12
SGCEO43556 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.8□□□□□ -2.12
SGCEO43556 DPH3P2-201ENST00000422618 250 ntBASIC1.8□□□□□ -2.12
SGCEO43556 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.8□□□□□ -2.12
SGCEO43556 MTND5P14-201ENST00000441481 1267 ntBASIC1.8□□□□□ -2.12
SGCEO43556 AC096638.1-201ENST00000444678 216 ntBASIC1.8□□□□□ -2.12
SGCEO43556 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.8□□□□□ -2.12
SGCEO43556 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.8□□□□□ -2.12
SGCEO43556 AL441985.1-201ENST00000457727 251 ntBASIC1.8□□□□□ -2.12
SGCEO43556 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.8□□□□□ -2.12
SGCEO43556 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.8□□□□□ -2.12
SGCEO43556 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.8□□□□□ -2.12
SGCEO43556 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.8□□□□□ -2.12
SGCEO43556 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.8□□□□□ -2.12
SGCEO43556 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
SGCEO43556 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.8□□□□□ -2.12
SGCEO43556 AC087894.1-201ENST00000538359 518 ntBASIC1.8□□□□□ -2.12
SGCEO43556 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.8□□□□□ -2.12
SGCEO43556 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.8□□□□□ -2.12
SGCEO43556 MIR4287-201ENST00000579398 78 ntBASIC1.8□□□□□ -2.12
SGCEO43556 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.8□□□□□ -2.12
SGCEO43556 MTCYBP22-201ENST00000603788 447 ntBASIC1.8□□□□□ -2.12
SGCEO43556 AL138963.2-201ENST00000605137 226 ntBASIC1.8□□□□□ -2.12
SGCEO43556 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.8□□□□□ -2.12
SGCEO43556 AL627230.6-201ENST00000611129 280 ntBASIC1.8□□□□□ -2.12
SGCEO43556 AL356094.1-201ENST00000624663 1212 ntBASIC1.8□□□□□ -2.12
SGCEO43556 AP003485.1-201ENST00000625093 753 ntBASIC1.8□□□□□ -2.12
SGCEO43556 AC099063.3-201ENST00000642066 185 ntBASIC1.8□□□□□ -2.12
SGCEO43556 AP006437.1-201ENST00000641440 3685 ntBASIC1.8□□□□□ -2.12
SGCEO43556 AC092447.10-201ENST00000620607 1652 ntBASIC1.8□□□□□ -2.12
SGCEO43556 RNU6-1167P-201ENST00000363227 94 ntBASIC1.79□□□□□ -2.12
SGCEO43556 RNA5SP160-201ENST00000364866 120 ntBASIC1.79□□□□□ -2.12
SGCEO43556 RNA5SP240-201ENST00000365355 128 ntBASIC1.79□□□□□ -2.12
SGCEO43556 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SGCEO43556 AL512604.1-201ENST00000404812 257 ntBASIC1.79□□□□□ -2.12
SGCEO43556 SNORA3.2-201ENST00000408221 125 ntBASIC1.79□□□□□ -2.12
SGCEO43556 RN7SKP223-201ENST00000410582 62 ntBASIC1.79□□□□□ -2.12
SGCEO43556 EDDM3CP-201ENST00000415977 425 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms