Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AC012498.1-201ENST00000424037 437 ntBASIC3.98□□□□□ -1.77
PRPF3O43395 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.98□□□□□ -1.77
PRPF3O43395 AL139415.2-201ENST00000431968 163 ntBASIC3.98□□□□□ -1.77
PRPF3O43395 AL606489.2-201ENST00000433886 234 ntBASIC3.98□□□□□ -1.77
PRPF3O43395 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.98□□□□□ -1.77
PRPF3O43395 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.98□□□□□ -1.77
PRPF3O43395 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PRPF3O43395 FDX1P2-201ENST00000450769 375 ntBASIC3.98□□□□□ -1.77
PRPF3O43395 RPS4XP2-201ENST00000458402 793 ntBASIC3.98□□□□□ -1.77
PRPF3O43395 RPL23AP62-201ENST00000463396 453 ntBASIC3.98□□□□□ -1.77
PRPF3O43395 EIF4EP3-201ENST00000498782 656 ntBASIC3.98□□□□□ -1.77
PRPF3O43395 AC109927.2-201ENST00000506416 303 ntBASIC3.98□□□□□ -1.77
PRPF3O43395 AC006445.2-201ENST00000510061 472 ntBASIC3.98□□□□□ -1.77
PRPF3O43395 LRRC34P2-201ENST00000514850 553 ntBASIC3.98□□□□□ -1.77
PRPF3O43395 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.98□□□□□ -1.77
PRPF3O43395 RNU6-123P-201ENST00000516163 102 ntBASIC3.98□□□□□ -1.77
PRPF3O43395 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.98□□□□□ -1.77
PRPF3O43395 RNU6-914P-201ENST00000516749 109 ntBASIC3.98□□□□□ -1.77
PRPF3O43395 IGKV2-26-201ENST00000518305 343 ntBASIC3.98□□□□□ -1.77
PRPF3O43395 PSMA2P1-201ENST00000526365 646 ntBASIC3.98□□□□□ -1.77
PRPF3O43395 MIR4444-1-201ENST00000581696 74 ntBASIC3.98□□□□□ -1.77
PRPF3O43395 MIR4444-2-201ENST00000584390 74 ntBASIC3.98□□□□□ -1.77
PRPF3O43395 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.98□□□□□ -1.77
PRPF3O43395 NRBF2P5-201ENST00000603087 788 ntBASIC3.98□□□□□ -1.77
PRPF3O43395 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.98□□□□□ -1.77
PRPF3O43395 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.98□□□□□ -1.77
PRPF3O43395 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.98□□□□□ -1.77
PRPF3O43395 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
PRPF3O43395 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
PRPF3O43395 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.97□□□□□ -1.77
PRPF3O43395 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.97□□□□□ -1.77
PRPF3O43395 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
PRPF3O43395 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.97□□□□□ -1.77
PRPF3O43395 AC091152.2-201ENST00000591628 2569 ntBASIC3.97□□□□□ -1.77
PRPF3O43395 RNU6-288P-201ENST00000363690 104 ntBASIC3.97□□□□□ -1.77
PRPF3O43395 Y_RNA.248-201ENST00000364501 109 ntBASIC3.97□□□□□ -1.77
PRPF3O43395 Y_RNA.381-201ENST00000365666 102 ntBASIC3.97□□□□□ -1.77
PRPF3O43395 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
PRPF3O43395 RNU6-140P-201ENST00000384566 108 ntBASIC3.97□□□□□ -1.77
PRPF3O43395 RNU6-1077P-201ENST00000410506 102 ntBASIC3.97□□□□□ -1.77
PRPF3O43395 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.97□□□□□ -1.77
PRPF3O43395 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.97□□□□□ -1.77
PRPF3O43395 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.97□□□□□ -1.77
PRPF3O43395 RPS24P13-201ENST00000442520 397 ntBASIC3.97□□□□□ -1.77
PRPF3O43395 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.97□□□□□ -1.77
PRPF3O43395 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.97□□□□□ -1.77
PRPF3O43395 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.97□□□□□ -1.77
PRPF3O43395 AC091885.1-201ENST00000506658 268 ntBASIC3.97□□□□□ -1.77
PRPF3O43395 AC117522.3-201ENST00000507974 584 ntBASIC3.97□□□□□ -1.77
PRPF3O43395 RN7SKP219-201ENST00000516825 296 ntBASIC3.97□□□□□ -1.77
PRPF3O43395 SNORD60.2-201ENST00000516883 86 ntBASIC3.97□□□□□ -1.77
PRPF3O43395 RNU6-1315P-201ENST00000517187 99 ntBASIC3.97□□□□□ -1.77
PRPF3O43395 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.97□□□□□ -1.77
PRPF3O43395 MIR4801-201ENST00000582704 82 ntBASIC3.97□□□□□ -1.77
PRPF3O43395 AC007014.2-201ENST00000615581 479 ntBASIC3.97□□□□□ -1.77
PRPF3O43395 AL354950.2-201ENST00000617939 290 ntBASIC3.97□□□□□ -1.77
PRPF3O43395 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.97□□□□□ -1.77
PRPF3O43395 FER-210ENST00000628534 558 ntTSL 5 BASIC3.97□□□□□ -1.77
PRPF3O43395 MIR3688-2-201ENST00000636963 87 ntBASIC3.97□□□□□ -1.77
PRPF3O43395 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.97□□□□□ -1.77
PRPF3O43395 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PRPF3O43395 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
PRPF3O43395 AL513302.2-201ENST00000562313 1842 ntBASIC3.97□□□□□ -1.77
PRPF3O43395 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
PRPF3O43395 RNU6-1090P-201ENST00000364065 94 ntBASIC3.96□□□□□ -1.78
PRPF3O43395 RNU6-395P-201ENST00000365662 106 ntBASIC3.96□□□□□ -1.78
PRPF3O43395 MIR449B-201ENST00000384995 97 ntBASIC3.96□□□□□ -1.78
PRPF3O43395 MIR888-201ENST00000401186 77 ntBASIC3.96□□□□□ -1.78
PRPF3O43395 AL139397.2-201ENST00000404529 772 ntBASIC3.96□□□□□ -1.78
PRPF3O43395 MIR1277-201ENST00000408536 78 ntBASIC3.96□□□□□ -1.78
PRPF3O43395 RNU2-68P-201ENST00000410878 191 ntBASIC3.96□□□□□ -1.78
PRPF3O43395 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.96□□□□□ -1.78
PRPF3O43395 RPL7P46-201ENST00000425129 740 ntBASIC3.96□□□□□ -1.78
PRPF3O43395 MRPS10P2-201ENST00000431226 381 ntBASIC3.96□□□□□ -1.78
PRPF3O43395 SNRPEP9-201ENST00000436794 238 ntBASIC3.96□□□□□ -1.78
PRPF3O43395 AC104058.1-201ENST00000448028 297 ntBASIC3.96□□□□□ -1.78
PRPF3O43395 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.96□□□□□ -1.78
PRPF3O43395 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.96□□□□□ -1.78
PRPF3O43395 SNRPFP3-201ENST00000457792 225 ntBASIC3.96□□□□□ -1.78
PRPF3O43395 RPS29P15-201ENST00000458329 171 ntBASIC3.96□□□□□ -1.78
PRPF3O43395 RNU7-170P-201ENST00000459303 61 ntBASIC3.96□□□□□ -1.78
PRPF3O43395 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.96□□□□□ -1.78
PRPF3O43395 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.96□□□□□ -1.78
PRPF3O43395 SNORA31.1-201ENST00000515993 133 ntBASIC3.96□□□□□ -1.78
PRPF3O43395 SNORA31.5-201ENST00000516190 133 ntBASIC3.96□□□□□ -1.78
PRPF3O43395 RNA5SP471-201ENST00000516971 106 ntBASIC3.96□□□□□ -1.78
PRPF3O43395 AC007458.1-201ENST00000542812 373 ntBASIC3.96□□□□□ -1.78
PRPF3O43395 TGIF1P1-201ENST00000558095 802 ntBASIC3.96□□□□□ -1.78
PRPF3O43395 MIR1273C-201ENST00000578669 77 ntBASIC3.96□□□□□ -1.78
PRPF3O43395 MIR5692A1-201ENST00000580523 69 ntBASIC3.96□□□□□ -1.78
PRPF3O43395 AL158032.1-201ENST00000605401 106 ntBASIC3.96□□□□□ -1.78
PRPF3O43395 U3.45-201ENST00000607547 219 ntBASIC3.96□□□□□ -1.78
PRPF3O43395 FTX_3.1-201ENST00000610451 147 ntBASIC3.96□□□□□ -1.78
PRPF3O43395 AC099506.2-201ENST00000623074 221 ntBASIC3.96□□□□□ -1.78
PRPF3O43395 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PRPF3O43395 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PRPF3O43395 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PRPF3O43395 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.96□□□□□ -1.78
PRPF3O43395 AC233263.6-201ENST00000631132 1963 ntBASIC3.96□□□□□ -1.78
PRPF3O43395 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms